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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:181303..183015+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_42510-T1 ID=CAN33_42510-T1|Name=CAN33_42510-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1713bp|location=Sequence derived from alignment at NKJJ01000022.1:181303..183015+ (Aspergillus niger FDAARGOS_311)
ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC
CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC
GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT
GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC
ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG
AGACAACCCCAACACCGACCGGAGACCAAACTTCGGTCGTTCGAGCCGCA
CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC
GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC
CAGCCTTGCACCCGATATTCAAATTCGCCACCTCATTGGCCGCTGGCCAT
CCCATTCTCAACGACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG
CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTTGATGTGCTCATTGA
GTCCTAGTCTGGTTCACCAGACACGGAGTCATCTATACTACTCGTCCGCG
ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACCCTAC
CACGATCCTGATTGTGCTTGTTCTGTTCGCTCATCTAGAGCAAGCTATGG
GGAATTTTCAGGGCTTCTATACTCACGTCCGGGGCATGATGAATCTTCTT
GAATGGCATAACGGCGTCAAAGACGCAGCCACCAAGTCGCTGCTTGCTTC
ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT
CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA
TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT
CATGTGTGAATCACACCGGTTGAATTTCAACGCCGTGCTGCAGCAGTTTC
GGAATTTGCAGTCGAACGATGCTAGTGGTTCCGATGTCGACAAACGCTAT
GTTTATTGCACTGCTCTATTGCATCGAGAAGCGGCAAAGCTGGATGCGTG
GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA
CAAACGGTACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC
GCATACTACGCGGTTGCGCGAGCCATGCAGTGCACGGGGGTTTTACGACT
CCTCTACAATCCTGATACCCCTCAGCACGCACGGGAATGTGATGAAGAAG
AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG
ACATCAATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT
GGCGGGTATTCTCCGATGCCAGAGTCTAGCAGTCGGGTTGGAGATCCAGG
ACTGGTTACAGGCGCTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT
CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC
AATCGGCCGAGATATTTTTGCCGTCACTCAGCCGGTGGATGACGGAGGCG
GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC
GTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCTC
CCTGGATGTCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:181303..183015+ >CAN33_42510-T1 ID=CAN33_42510-T1|Name=CAN33_42510-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1713bp|location=Sequence derived from alignment at NKJJ01000022.1:181303..183015+ (Aspergillus niger FDAARGOS_311)
ATGTACAAACCGGCACCACCGAGACCTAAAAAGACAAACATCATCCGCTC
CCGCAATGGCTGTAAAAGTTGCCGCAGTCGCAGAACCAAGTGTGATGAGC
GGAAGCCAAAATGCGGAACCTGCGCGAGACTTGGAAAGATCTGTGAATAT
GCTAGACCAGCTTTCAAATTTCAAGTTACGACAGTCGACGACCCGAGACC
ACCACCAGAGCCACTAGCAACAGCAACAGCGTCCAATGTGTCGTCAGAAG
AGACAACCCCAACACCGACCGGAGACCAAACTTCGGTCGTTCGAGCCGCA
CAAGATGTTCCCTCTATCGGAAGCTATGACATTATCCGGTCATTGCAAAC
GACGGACCGCGATATCTTCTATACCACCTACTGGGAGGGCTCTTGCTTGC
CAGCCTTGCACCCGATATTCAAATTCGCCACCTCATTGGCCGCTGGCCAT
CCCATTCTCAACGACGCCCTCCTAGCTTTATCTGCCTGCAATATTGGCCG
CATTCAGGCCGAGCACAGAACAGAATCGTCTGGGTTGATGTGCTCATTGA
GTCCTAGTCTGGTTCACCAGACACGGAGTCATCTATACTACTCGTCCGCG
ATCCAAAAGCTGGCCATCATGCAATCACAAGACTACCATCAGAACCCTAC
CACGATCCTGATTGTGCTTGTTCTGTTCGCTCATCTAGAGCAAGCTATGG
GGAATTTTCAGGGCTTCTATACTCACGTCCGGGGCATGATGAATCTTCTT
GAATGGCATAACGGCGTCAAAGACGCAGCCACCAAGTCGCTGCTTGCTTC
ATGGATGCAAATCCGGTATGTTGTCTGGTGGGCTCGGGCCTATTTCAGTT
CGATAGAAGTTTGTCAGCATCTCCCATCGATACCTTTACCGGCCTCCCTA
TTAGACGTCCCGCAGACATTGCATGAGCGACGTGTGAAAGTTCTTAGCAT
CATGTGTGAATCACACCGGTTGAATTTCAACGCCGTGCTGCAGCAGTTTC
GGAATTTGCAGTCGAACGATGCTAGTGGTTCCGATGTCGACAAACGCTAT
GTTTATTGCACTGCTCTATTGCATCGAGAAGCGGCAAAGCTGGATGCGTG
GGTGTTGCAACTTCCGCCATCTGAGCAGCCAATATACGAGCTCAACGACA
CAAACGGTACTACCATCCGTTTTCAGTCCCACGATGCCGCGCTGAACTAC
GCATACTACGCGGTTGCGCGAGCCATGCAGTGCACGGGGGTTTTACGACT
CCTCTACAATCCTGATACCCCTCAGCACGCACGGGAATGTGATGAAGAAG
AGTATTGGGTTCAGACATTAGTCCGTATTGCACAGTGGAGCGATATGCAG
ACATCAATCACCAAAAATAGCTACACCATCGGGTTCTCAGGCTTACTCCT
GGCGGGTATTCTCCGATGCCAGAGTCTAGCAGTCGGGTTGGAGATCCAGG
ACTGGTTACAGGCGCTCATAAACCTGCAACCAACAGAAGAAGGGGCATTT
CCGATCTATCAGACTTTTCATGTGGTCAAGATCATCAATCAACAGAGGGC
AATCGGCCGAGATATTTTTGCCGTCACTCAGCCGGTGGATGACGGAGGCG
GAACGCCCAAGCTTACTGGCTACAACAGTCAGTCGATCACAAGCCTTCTC
GTCCATGGGAAGTACCAGAATTTGGATTGCCTTTTCCAAGAGTGCATCTC
CCTGGATGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:181303..183015 + |
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