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CAN33_4275-T1, CAN33_4275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4275-T1
Unique NameCAN33_4275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:340301..340793-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4275-T1 ID=CAN33_4275-T1|Name=CAN33_4275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=493bp|location=Sequence derived from alignment at NKJJ01000019.1:340301..340793- (Aspergillus niger FDAARGOS_311)
ATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCGGCGCCCCGGCCTG
TGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAGGACAGCAACAAGA
TTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTATTGCCAGC
TCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCCTCGACGAGGCCGC
TAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGCTTGCCCCCTGTTA
AGCGTATGTTTATCCCTTGCTACTGTGGAGACGAGAGGATTGGAAGAAAT
CGGGGAGAAATGATAAAGCTAACATATTCTGATAGTGCACTGCTCCATGC
TTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTACACCAAGAAC
CCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTATCCCGGA
AGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:340301..340793-

>CAN33_4275-T1 ID=CAN33_4275-T1|Name=CAN33_4275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=822bp|location=Sequence derived from alignment at NKJJ01000019.1:340301..340793- (Aspergillus niger FDAARGOS_311)
TGCACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGAT
TACTACACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGG
TGCTTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAA
CTGCTTAAATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCGGCGCC
CCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAGGACAG
CAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTA
TTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCCTCGAC
GAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGCTTGCC
CCCTGTTAAGCTGCACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCG
CCATCTCGGATTACTACACCAAGAACCCTCGCACCGTGAAGACCGATCTG
TCCGGCACGGGTGCTTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGAC
CAGCAGCGCAACTGCTTAAATGGCCAAGTCGATGGACGTTGGTACCGGAC
TCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTC
GACAAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTG
CGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAA
TGACCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAG
TTGTGCTTGCCCCCTGTTAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ISU1CAN33_4275Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4275-T1CAN33_4275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4275-T1.cdsCAN33_4275-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4275-T1.exon2CAN33_4275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4275-T1.exon1CAN33_4275-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.1
DBxrefInterPro:IPR002871
DBxrefPFAM:PF01592
Productiron-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:340301..340793 -
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