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CAN33_42935-T1, CAN33_42935-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42935-T1
Unique NameCAN33_42935-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:403942..405124+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42935-T1 ID=CAN33_42935-T1|Name=CAN33_42935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1183bp|location=Sequence derived from alignment at NKJJ01000022.1:403942..405124+ (Aspergillus niger FDAARGOS_311)
ATGTTCGGCTGGACACGGCGCTTCTCCAGTATGGCCCCTCCTGAGCGCAC
ATTTATTTATCCCCTGCTGCTGCTGAACGACACCTGCTAACCATCCTTTC
TCACACGTTCTCACAGCCGCCACATCTTTCCTCAAATCCACCACAATGGC
CGTCTCCTCCCGCCAGCAACACACCTTTCAAGTCTTCCGCGATGTGCCCC
CACTTCGCCAGCTGCGTCGAGAGCTCCTCCTCTCCAACCGGACCGTCGGT
CTCGTCCCTACCATGGGTGCCCTCCACGAAGGCCATCTCTCCCTCATCCG
ACAAGCCGCGGCCGAGAACACCGACGTCTTCGTCAGCATCTACGTTAATC
CGACACAGTTCGGCGTCACAGAGGATCTCTCCAGCTACCCGCGCACTTGG
GACAGCGATGTTGCGAAGTTAGAGGAATTGAACGCGGAACTGGCCCGCCA
GAACAGTAACAACGGTCGCATCACCGCCATTCTGGCGCCCACCTCCAAGG
TCATGTACCCTACGCTGCCTCCTTCATCCGAGATTGATGGCGACGGTTCC
TTCGTGACCATCACCCCTCTCTCCCGGAAACTGGAGGGAGCTTCACGGCC
TGTTTTCTTCCGTGGAGTTGCGACCGTCTGCATGAAGCTGTTCAACATTG
TCCATGCCGACCGGGCTTACTTTGGTCAGAAGGACGTGCAGCAAACTGTG
GTCATCAAGCGTTTGGTGAAGGACTTCTACATCGATACGGAGATCAAGAT
CGGGGAGACTGTTCGTGACCACGATGGGCTGGCAATGAGTTCGAGGAACG
TTTACCTTGGTAAGAGAAGACGGGCAGTGGGCCTGGTCCTCTACGAAGCC
ATGAAGGCGGCGGAGAATGCCTACAACGCTGGCAAGGTCAACCGGAGTGA
GATCCTTGACGCAGCTAACAGCGTCACTGAACGGGTTCTGTCTGAGCAGA
AGGCGTTGGCGCCCACGGAGAGGGCGCTGTACGAAGTTGACTACATCTCG
CTTGCTGATCCGGATACTCTGGACGAGCTGGAAGTTGTTGATCCCGCTAA
GGGCGCCATTCTGAGCGGTGCAGTCAAGATGGCTCCGCTGGAGGAGGCAA
AGCCGGGCGAGGACTGCGGCCTCGGTGACGGCCAAGTTCCTGTGCGTTTG
ATCGACAACTTGATCTTCAAGCCGCGGGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:403942..405124+

>CAN33_42935-T1 ID=CAN33_42935-T1|Name=CAN33_42935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2190bp|location=Sequence derived from alignment at NKJJ01000022.1:403942..405124+ (Aspergillus niger FDAARGOS_311)
ATGTTCGGCTGGACACGGCGCTTCTCCACCGCCACATCTTTCCTCAAATC
CACCACAATGGCCGTCTCCTCCCGCCAGCAACACACCTTTCAAGTCTTCC
GCGATGTGCCCCCACTTCGCCAGCTGCGTCGAGAGCTCCTCCTCTCCAAC
CGGACCGTCGGTCTCGTCCCTACCATGGGTGCCCTCCACGAAGGCCATCT
CTCCCTCATCCGACAAGCCGCGGCCGAGAACACCGACGTCTTCGTCAGCA
TCTACGTTAATCCGACACAGTTCGGCGTCACAGAGGATCTCTCCAGCTAC
CCGCGCACTTGGGACAGCGATGTTGCGAAGTTAGAGGAATTGAACGCGGA
ACTGGCCCGCCAGAACAGTAACAACGGTCGCATCACCGCCATTCTGGCGC
CCACCTCCAAGGTCATGTACCCTACGCTGCCTCCTTCATCCGAGATTGAT
GGCGACGGTTCCTTCGTGACCATCACCCCTCTCTCCCGGAAACTGGAGGG
AGCTTCACGGCCTGTTTTCTTCCGTGGAGTTGCGACCGTCTGCATGAAGC
TGTTCAACATTGTCCATGCCGACCGGGCTTACTTTGGTCAGAAGGACGTG
CAGCAAACTGTGGTCATCAAGCGTTTGGTGAAGGACTTCTACATCGATAC
GGAGATCAAGATCGGGGAGACTGTTCGTGACCACGATGGGCTGGCAATGA
GTTCGAGGAACGTTTACCTTGGTAAGAGAAGACGGGCAGTGGGCCTGGTC
CTCTACGAAGCCATGAAGGCGGCGGAGAATGCCTACAACGCTGGCAAGGT
CAACCGGAGTGAGATCCTTGACGCAGCTAACAGCGTCACTGAACGGGTTC
TGTCTGAGCAGAAGGCGTTGGCGCCCACGGAGAGGGCGCTGTACGAAGTT
GACTACATCTCGCTTGCTGATCCGGATACTCTGGACGAGCTGGAAGTTGT
TGATCCCGCTAAGGGCGCCATTCTGAGCGGTGCAGTCAAGATGGCTCCGC
TGGAGGAGGCAAAGCCGGGCGAGGACTGCGGCCTCGGTGACGGCCAAGTT
CCTGTGCGTTTGATCGACAACTTGATCTTCAAGCCGCGGGTTTGAATGTT
CGGCTGGACACGGCGCTTCTCCACCGCCACATCTTTCCTCAAATCCACCA
CAATGGCCGTCTCCTCCCGCCAGCAACACACCTTTCAAGTCTTCCGCGAT
GTGCCCCCACTTCGCCAGCTGCGTCGAGAGCTCCTCCTCTCCAACCGGAC
CGTCGGTCTCGTCCCTACCATGGGTGCCCTCCACGAAGGCCATCTCTCCC
TCATCCGACAAGCCGCGGCCGAGAACACCGACGTCTTCGTCAGCATCTAC
GTTAATCCGACACAGTTCGGCGTCACAGAGGATCTCTCCAGCTACCCGCG
CACTTGGGACAGCGATGTTGCGAAGTTAGAGGAATTGAACGCGGAACTGG
CCCGCCAGAACAGTAACAACGGTCGCATCACCGCCATTCTGGCGCCCACC
TCCAAGGTCATGTACCCTACGCTGCCTCCTTCATCCGAGATTGATGGCGA
CGGTTCCTTCGTGACCATCACCCCTCTCTCCCGGAAACTGGAGGGAGCTT
CACGGCCTGTTTTCTTCCGTGGAGTTGCGACCGTCTGCATGAAGCTGTTC
AACATTGTCCATGCCGACCGGGCTTACTTTGGTCAGAAGGACGTGCAGCA
AACTGTGGTCATCAAGCGTTTGGTGAAGGACTTCTACATCGATACGGAGA
TCAAGATCGGGGAGACTGTTCGTGACCACGATGGGCTGGCAATGAGTTCG
AGGAACGTTTACCTTGGTAAGAGAAGACGGGCAGTGGGCCTGGTCCTCTA
CGAAGCCATGAAGGCGGCGGAGAATGCCTACAACGCTGGCAAGGTCAACC
GGAGTGAGATCCTTGACGCAGCTAACAGCGTCACTGAACGGGTTCTGTCT
GAGCAGAAGGCGTTGGCGCCCACGGAGAGGGCGCTGTACGAAGTTGACTA
CATCTCGCTTGCTGATCCGGATACTCTGGACGAGCTGGAAGTTGTTGATC
CCGCTAAGGGCGCCATTCTGAGCGGTGCAGTCAAGATGGCTCCGCTGGAG
GAGGCAAAGCCGGGCGAGGACTGCGGCCTCGGTGACGGCCAAGTTCCTGT
GCGTTTGATCGACAACTTGATCTTCAAGCCGCGGGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004592pantoate-beta-alanine ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_42935CAN33_42935Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42935-T1.exon1CAN33_42935-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42935-T1.exon2CAN33_42935-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42935-T1.cdsCAN33_42935-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42935-T1CAN33_42935-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR042176
DBxrefInterPro:IPR003721
DBxrefInterPro:IPR014729
DBxrefPFAM:PF02569
ProductPantoate-beta-alanine ligase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:403942..405124 +
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