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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:405540..407853+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_42940-T1 ID=CAN33_42940-T1|Name=CAN33_42940-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2314bp|location=Sequence derived from alignment at NKJJ01000022.1:405540..407853+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGACAGT
CCTCAGACCCCAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGACCGAC
TCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAAAGAG
AAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGAATCG
CATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAAGATG
ATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACATCCC
GGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGAGGCC
CCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAGGACG
CCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCACGAAC
CTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGGAGGT
GAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTGAAGG
AGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGACGATG
GCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGAATCA
GAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTATTTG
CTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGTGGTA
TTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGGTGAT
TGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGATTGA
ATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAATACG
CAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGGGAGA
TCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGATTATTCAGAA
GCTGGATGCTAGGCAGCGCCCGAGTCGGATTCCTGGGATCCCCGCGAAGA
GGACGACGATATTGTGTTCGGCTACGTTGAAGATGACTGTGCAGAAGCTG
GGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCCGCGGA
TGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCGGGTGC
CGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTACGGCTT
GTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGGTCTGT
TATGAAGGCTATCATTTTGTGTCTTGTGCGGACTCTGTCGACTTCCACTT
TGAGGTGTTCACGCGGAAGAATGGAGATGAGGAAGAGAAGAAGGAAGAGA
GTGAGGATAGTGATGAGGAGGATGCAGAAGAGAAGAGGAAGAAGCTCGGC
GCTTCGGCTCATGGAACCATCGCGCCTGCCACGGCCTTTTCGAACCCCTC
CAACCCGGTGGCGCTGCATAGACTGCACGGTTCTCTGCCTCAACATGTCC
GGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCCGTGCTC
ATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGTTGACCT
GGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGCACAGAA
TCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATTTTCCTC
ATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGGCTACCG
GGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTCTGAAGC
GCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAGGAAAAG
GCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAACAAAAA
CTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCGCCTATG
CCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAGCTTCAT
CTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAGCAAGAT
CAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGGATTTCA
AGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTCAC
GACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCACGGCAGC
TCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAAGCGAGT
TCAATCTTGCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:405540..407853+ >CAN33_42940-T1 ID=CAN33_42940-T1|Name=CAN33_42940-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6048bp|location=Sequence derived from alignment at NKJJ01000022.1:405540..407853+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGACAGT
CCTCAGACCCCAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGACCGAC
TCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAAAGAG
AAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGAATCG
CATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAAGATG
ATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACATCCC
GGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGAGGCC
CCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAGGACG
CCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCACGAAC
CTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGGAGGT
GAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTGAAGG
AGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGACGATG
GCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGAATCA
GAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTATTTG
CTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGTGGTA
TTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGGTGAT
TGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGATTGA
ATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAATACG
CAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGGGAGA
TCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGATTATTCAGAA
GCTGGATGCTAGGCAGCGCCCGAAAGCTGGGAGAGATCAGTTTGAAGGAT
GCGGTGCATATTCAGGCGGATCCCGCGGATGAAGATGGCGAGCCAAGAAA
GAAGGACGAGGATGATGCGTTCCGGGTGCCGGCGCAGCTGAAGCAGTCAT
ATGCGATTGTCGCGTCGAAGCTACGGCTTGTTACGCTTACGGCTTTTATG
AAACGGACGTTTATGAGAAAGGGACTGCACGGTTCTCTGCCTCAACATGT
CCGGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCCGTGC
TCATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGTTGAC
CTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGCACAG
AATCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATTTTCC
TCATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGGCTAC
CGGGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTCTGAA
GCGCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAGGAAA
AGGCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAACAAA
AACTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCGCCTA
TGCCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAGCTTC
ATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAGCAAG
ATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGGATTT
CAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTC
ACGACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCACGGCA
GCTCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAAGCGA
GTTCAATCTTGCTTGAATGGCCGACGACGGTCTCCTTCTCAACTTCGCCA
TCCCGGACACGACAGTCCTCAGACCCCAAAAAACCAAAGTAAAAGGCGGC
ACATGGCGGGACCGACTCAGCGCAAAGAAAATCGCCGCGCACCGAACGAA
CAACCCGCGCAAAGAGAAATCAGCCTCAAATGGCGAGCAGAATAGCAACC
CTCGGAATCCGAATCGCATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGA
CAGCGCATTGAAGATGATGACGGAAACGGAGGATCGCAACCACGCCAGCA
GCAGCAACAACATCCCGGGGCGCCCCGACAGTTCGTATCATCCCTGTTCT
CGAAGAACCCGAGGCCCCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGA
GCCGAGGTAGAGGACGCCAAGCCGACGAACGCGCCGCTGATCGATGGACT
GGACACATTCACGAACCTGGGACTATCGGCACCGCTGGCGGCGCATTTGC
TGACAAAACTGGAGGTGAAGGCGCCGACAGCGATTCAGAAAGCGAGTATC
ACGCAACTATTGAAGGAGGAGAGTGATGCGTTCATACAGGCCGAGACCGG
ATCCGGAAAGACGATGGCGTATCTGCTGCCGCTTGTGCAACGGATAATGA
CGATTTCGCTGAATCAGAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGC
GATAGTGGGTTATTTGCTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAA
GCAGATTGCGGTGGTATTGGAGGGGTTGTTGCGATGTGCGCATTGGATTG
TGGCGGGGACGGTGATTGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGG
TTGAGGAAGGGATTGAATATCTTGGTTGCGACGCCGGGACGGTTGGCGGA
TCATTTGGAGAATACGCAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGG
TGTTGGATGAGGGAGATCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTG
GCGGGATTATTCAGAAGCTGGATGCTAGGCAGCGCCCGAAAGCTGGGAGA
GATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCCGCGGATGAAG
ATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCGGGTGCCGGCG
CAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTACGGCTTGTTAC
GCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGACTGCACGGTT
CTCTGCCTCAACATGTCCGGACAGCCACCCTGGGTGCTTTTGCCCGCAAC
CGCGAACCTTCCGTGCTCATCTGTACTGACGTTGCGTCCCGTGGTCTGGA
TCTGCCGAATGTTGACCTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCG
AGGACCATCTGCACAGAATCGGACGTACTGCGCGTCTGGGGCGTGACGGT
CGTGCACTCATTTTCCTCATGCCCGGCTGTGAGGAGGGATACGTCGACAT
TCTGAAGAAGGGCTACCGGGACGGTGGAAAGGCTCTGACACGCAACAGCG
CGGACGACATTCTGAAGCGCGGATTTGGAGGAAACGTCGAGTCGCAGAAC
GTAGACTGGGAGGAAAAGGCAACCGAATGGCAGCTGGATGTGGAACGATG
GGCTTTGGAAAACAAAAACTACCTCGAAATGGCCCGGCGAGCTTATCAGT
CTCATATTCGCGCCTATGCCACACATATCGCCAACGAGCGGAGCATGTTC
AACATTAAGGAGCTTCATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCG
TGATCGTCCCAGCAAGATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTG
ACACCAAGAAGGATTTCAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAG
AGGAAGGCTGGTGGTCACGACGACGACGATGATGATGTTCCTCGTCAAAC
CGACACTCTCACGGCAGCTCAAAAGATGAGGGCCAAGATGAAGGAGCACA
TGGCCGGTGCAAGCGAGTTCAATCTTGCTTGAATGGCCGACGACGGTCTC
CTTCTCAACTTCGCCATCCCGGACACGACAGTCCTCAGACCCCAAAAAAC
CAAAGTAAAAGGCGGCACATGGCGGGACCGACTCAGCGCAAAGAAAATCG
CCGCGCACCGAACGAACAACCCGCGCAAAGAGAAATCAGCCTCAAATGGC
GAGCAGAATAGCAACCCTCGGAATCCGAATCGCATTCAAGTATCCGGTCC
GCGGCCGGTGAAGAGACAGCGCATTGAAGATGATGACGGAAACGGAGGAT
CGCAACCACGCCAGCAGCAGCAACAACATCCCGGGGCGCCCCGACAGTTC
GTATCATCCCTGTTCTCGAAGAACCCGAGGCCCCGGAACGCCGTTGAAGA
GAAGAACGAAGCCGGAGCCGAGGTAGAGGACGCCAAGCCGACGAACGCGC
CGCTGATCGATGGACTGGACACATTCACGAACCTGGGACTATCGGCACCG
CTGGCGGCGCATTTGCTGACAAAACTGGAGGTGAAGGCGCCGACAGCGAT
TCAGAAAGCGAGTATCACGCAACTATTGAAGGAGGAGAGTGATGCGTTCA
TACAGGCCGAGACCGGATCCGGAAAGACGATGGCGTATCTGCTGCCGCTT
GTGCAACGGATAATGACGATTTCGCTGAATCAGAAGAAGAGGGAGGAAGG
GGAGCAAGTGCAGCGCGATAGTGGGTTATTTGCTATTGTGTTGGCGCCGA
CGAGAGAGTTGTGTAAGCAGATTGCGGTGGTATTGGAGGGGTTGTTGCGA
TGTGCGCATTGGATTGTGGCGGGGACGGTGATTGGAGGAGAGAAGAAGAA
GAGTGAGAAGGCGCGGTTGAGGAAGGGATTGAATATCTTGGTTGCGACGC
CGGGACGGTTGGCGGATCATTTGGAGAATACGCAGGCGTTGGATGTGAGT
AATGTGCGGTGGTTGGTGTTGGATGAGGGAGATCGGTTGATGGAGTTGGG
GTTCGAGAAGGAGTTGGCGGGATTATTCAGAAGCTGGATGCTAGGCAGCG
CCCGAAAGCTGGGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCG
GATCCCGCGGATGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGC
GTTCCGGGTGCCGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGA
AGCTACGGCTTGTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGA
AAGGGACTGCACGGTTCTCTGCCTCAACATGTCCGGACAGCCACCCTGGG
TGCTTTTGCCCGCAACCGCGAACCTTCCGTGCTCATCTGTACTGACGTTG
CGTCCCGTGGTCTGGATCTGCCGAATGTTGACCTGGTCGTGGAGTACGAC
CCTGCCTTCAGCGCCGAGGACCATCTGCACAGAATCGGACGTACTGCGCG
TCTGGGGCGTGACGGTCGTGCACTCATTTTCCTCATGCCCGGCTGTGAGG
AGGGATACGTCGACATTCTGAAGAAGGGCTACCGGGACGGTGGAAAGGCT
CTGACACGCAACAGCGCGGACGACATTCTGAAGCGCGGATTTGGAGGAAA
CGTCGAGTCGCAGAACGTAGACTGGGAGGAAAAGGCAACCGAATGGCAGC
TGGATGTGGAACGATGGGCTTTGGAAAACAAAAACTACCTCGAAATGGCC
CGGCGAGCTTATCAGTCTCATATTCGCGCCTATGCCACACATATCGCCAA
CGAGCGGAGCATGTTCAACATTAAGGAGCTTCATCTCGGACATCTGGCGA
AGAGTTTCGCTCTGCGTGATCGTCCCAGCAAGATCAATGTCCCTGGTCTT
CGCCAAGCACAGGCTGACACCAAGAAGGATTTCAAGGCCGACCGCAAACC
GGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTCACGACGACGACGATGATG
ATGTTCCTCGTCAAACCGACACTCTCACGGCAGCTCAAAAGATGAGGGCC
AAGATGAAGGAGCACATGGCCGGTGCAAGCGAGTTCAATCTTGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260KNR |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR025313 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF13959 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent RNA helicase dbp7 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:405540..407853 + |
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