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CAN33_4295-T1, CAN33_4295-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4295-T1
Unique NameCAN33_4295-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:346915..348282-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4295-T1 ID=CAN33_4295-T1|Name=CAN33_4295-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1368bp|location=Sequence derived from alignment at NKJJ01000019.1:346915..348282- (Aspergillus niger FDAARGOS_311)
ATGACCCTGCGACGCTCCGCTCGTCTAACTGCAGCGTCAGTGTCCAAGAA
CAACAGCACCACCACCACTGTCCCACATCTGCAACCCAAAACTCAAACAA
AGAGAGCAGCCAGCAGAACTACAAACGGTGTCTCAAAGACACGAAAGCCT
GCTGCAGCGGCAGCAAGGGGCAAGAAAGCGCAGCTAAATGCGATTCTCAA
ACTTGACCAAGCTCCTCCCCTCACAGATTCACCAACATCATCATCATCAT
CATCATCATCATCATCATCATCATCATCATCATCATCACGCTCAAACAAC
AGCAGACAATCACCCAATACTACTACTACAGCCACTACTAACAACATCTG
GGACCCCATCCCCACCCCCACAGTTCACACCTCCAGCAGCAGAACGACCC
CTCCCCCGCTCGATCGACCGGTCGAACCGCACCACACCAACGCAACGCTC
CTCACCCCCCATGGCTCATCGCTAGTTGCATACCCCCCGGGCACAGATGC
GGACGCATCACCAAGCAAGACAGGCCGGCCCCGTCCCACCGCCACAACAG
GCACGCTTCTCGAGAAAGCAGCCGCACACCTGATCGCCACGGATCCGCGT
CTCGAATCGCTCATCCGCGAACAGCCCTGTCCGTTGTTCACGCCCGAGGG
CCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTTGTTAGTAGTATCATTG
GACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTAAGGATAAGTTTGTG
GCGTTGTTCAAGACAAATAATAAGGATGAGGATGGTACGAGACCGAGCTT
CTTCCCTACCCCGGAGGAAATCATCAAGATGGATATCAGCACGCTCCGGA
CAGCAGGTCTGTCCCAGCGCAAGGCGGAATACATACATGGGTTATCGGAG
AAGTTTGCCAACGGGGAACTGAGCGCCCGGATGTTATTGAATGCTAGTGA
CGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGGGGCTTGGGCAAATGGT
CTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGATAGATGTGTTTTCT
ACGGGTGATTTGGGTGTACAGTATGTGATTATCTGTGGGTGAATTGGGTA
GATGCTGACTTGTGTTGTTGCAGGAGAGGTTGTGCGGTGTTTGTGGGCAA
GGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAGTATATGC
CTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTATAGGTAT
GTGATGCCCGTTGATGTATGTCCTTGTGGGCTTGTTGTCTGACATCCGTA
CTAGGAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGTTAATATT
GCTGTGTTGGGTGGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000019.1:346915..348282-

>CAN33_4295-T1 ID=CAN33_4295-T1|Name=CAN33_4295-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4044bp|location=Sequence derived from alignment at NKJJ01000019.1:346915..348282- (Aspergillus niger FDAARGOS_311)
GAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGTTAATATTGCTG
TGTTGGGTGGGTAGGAGAGGTTGTGCGGTGTTTGTGGGCAAGGATGTAAA
CAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAGTATATGCCTGAAAAAG
ATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTATAGTTCACACCTCCAG
CAGCAGAACGACCCCTCCCCCGCTCGATCGACCGGTCGAACCGCACCACA
CCAACGCAACGCTCCTCACCCCCCATGGCTCATCGCTAGTTGCATACCCC
CCGGGCACAGATGCGGACGCATCACCAAGCAAGACAGGCCGGCCCCGTCC
CACCGCCACAACAGGCACGCTTCTCGAGAAAGCAGCCGCACACCTGATCG
CCACGGATCCGCGTCTCGAATCGCTCATCCGCGAACAGCCCTGTCCGTTG
TTCACGCCCGAGGGCCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTTGT
TAGTAGTATCATTGGACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTA
AGGATAAGTTTGTGGCGTTGTTCAAGACAAATAATAAGGATGAGGATGGT
ACGAGACCGAGCTTCTTCCCTACCCCGGAGGAAATCATCAAGATGGATAT
CAGCACGCTCCGGACAGCAGGTCTGTCCCAGCGCAAGGCGGAATACATAC
ATGGGTTATCGGAGAAGTTTGCCAACGGGGAACTGAGCGCCCGGATGTTA
TTGAATGCTAGTGACGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGGGG
CTTGGGCAAATGGTCTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGA
TAGATGTGTTTTCTACGGGTGATTTGGGTGTACAATGACCCTGCGACGCT
CCGCTCGTCTAACTGCAGCGTCAGTGTCCAAGAACAACAGCACCACCACC
ACTGTCCCACATCTGCAACCCAAAACTCAAACAAAGAGAGCAGCCAGCAG
AACTACAAACGGAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGT
TAATATTGCTGTGTTGGGTGGGTAGGAGAGGTTGTGCGGTGTTTGTGGGC
AAGGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAGTATAT
GCCTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTATAGTT
CACACCTCCAGCAGCAGAACGACCCCTCCCCCGCTCGATCGACCGGTCGA
ACCGCACCACACCAACGCAACGCTCCTCACCCCCCATGGCTCATCGCTAG
TTGCATACCCCCCGGGCACAGATGCGGACGCATCACCAAGCAAGACAGGC
CGGCCCCGTCCCACCGCCACAACAGGCACGCTTCTCGAGAAAGCAGCCGC
ACACCTGATCGCCACGGATCCGCGTCTCGAATCGCTCATCCGCGAACAGC
CCTGTCCGTTGTTCACGCCCGAGGGCCTAGCCGAGGAGATCGACCCGTTT
CGGAGCCTTGTTAGTAGTATCATTGGACAGCAGGTGTCAGGAGCAGCGGC
GAAGTCGATTAAGGATAAGTTTGTGGCGTTGTTCAAGACAAATAATAAGG
ATGAGGATGGTACGAGACCGAGCTTCTTCCCTACCCCGGAGGAAATCATC
AAGATGGATATCAGCACGCTCCGGACAGCAGGTCTGTCCCAGCGCAAGGC
GGAATACATACATGGGTTATCGGAGAAGTTTGCCAACGGGGAACTGAGCG
CCCGGATGTTATTGAATGCTAGTGACGAGGAACTCGTTGAGAAGTTGACT
GCTGTGCGGGGCTTGGGCAAATGGTCTGTTGAGATGTTTGCTTGTTTTGC
TCTGAAGCGGATAGATGTGTTTTCTACGGGTGATTTGGGTGTACAATGAC
CCTGCGACGCTCCGCTCGTCTAACTGCAGCGTCAGTGTCCAAGAACAACA
GCACCACCACCACTGTCCCACATCTGCAACCCAAAACTCAAACAAAGAGA
GCAGCCAGCAGAACTACAAACGGAGCTTGTTCATGTGGTATATGTGGCGG
GTGACGGATGTTAATATTGCTGTGTTGGGTGGGTAGGAGAGGTTGTGCGG
TGTTTGTGGGCAAGGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAG
TTCAAGTATATGCCTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGC
TCCGTATAGTTCACACCTCCAGCAGCAGAACGACCCCTCCCCCGCTCGAT
CGACCGGTCGAACCGCACCACACCAACGCAACGCTCCTCACCCCCCATGG
CTCATCGCTAGTTGCATACCCCCCGGGCACAGATGCGGACGCATCACCAA
GCAAGACAGGCCGGCCCCGTCCCACCGCCACAACAGGCACGCTTCTCGAG
AAAGCAGCCGCACACCTGATCGCCACGGATCCGCGTCTCGAATCGCTCAT
CCGCGAACAGCCCTGTCCGTTGTTCACGCCCGAGGGCCTAGCCGAGGAGA
TCGACCCGTTTCGGAGCCTTGTTAGTAGTATCATTGGACAGCAGGTGTCA
GGAGCAGCGGCGAAGTCGATTAAGGATAAGTTTGTGGCGTTGTTCAAGAC
AAATAATAAGGATGAGGATGGTACGAGACCGAGCTTCTTCCCTACCCCGG
AGGAAATCATCAAGATGGATATCAGCACGCTCCGGACAGCAGGTCTGTCC
CAGCGCAAGGCGGAATACATACATGGGTTATCGGAGAAGTTTGCCAACGG
GGAACTGAGCGCCCGGATGTTATTGAATGCTAGTGACGAGGAACTCGTTG
AGAAGTTGACTGCTGTGCGGGGCTTGGGCAAATGGTCTGTTGAGATGTTT
GCTTGTTTTGCTCTGAAGCGGATAGATGTGTTTTCTACGGGTGATTTGGG
TGTACAATGACCCTGCGACGCTCCGCTCGTCTAACTGCAGCGTCAGTGTC
CAAGAACAACAGCACCACCACCACTGTCCCACATCTGCAACCCAAAACTC
AAACAAAGAGAGCAGCCAGCAGAACTACAAACGGAGCTTGTTCATGTGGT
ATATGTGGCGGGTGACGGATGTTAATATTGCTGTGTTGGGTGGGTAGGAG
AGGTTGTGCGGTGTTTGTGGGCAAGGATGTAAACAAGTTGAAGGGGAAGG
GCGGCGGTAAGTTCAAGTATATGCCTGAAAAAGATATGTTGGAGCTGGCG
GCGAAGTTTGCTCCGTATAGTTCACACCTCCAGCAGCAGAACGACCCCTC
CCCCGCTCGATCGACCGGTCGAACCGCACCACACCAACGCAACGCTCCTC
ACCCCCCATGGCTCATCGCTAGTTGCATACCCCCCGGGCACAGATGCGGA
CGCATCACCAAGCAAGACAGGCCGGCCCCGTCCCACCGCCACAACAGGCA
CGCTTCTCGAGAAAGCAGCCGCACACCTGATCGCCACGGATCCGCGTCTC
GAATCGCTCATCCGCGAACAGCCCTGTCCGTTGTTCACGCCCGAGGGCCT
AGCCGAGGAGATCGACCCGTTTCGGAGCCTTGTTAGTAGTATCATTGGAC
AGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTAAGGATAAGTTTGTGGCG
TTGTTCAAGACAAATAATAAGGATGAGGATGGTACGAGACCGAGCTTCTT
CCCTACCCCGGAGGAAATCATCAAGATGGATATCAGCACGCTCCGGACAG
CAGGTCTGTCCCAGCGCAAGGCGGAATACATACATGGGTTATCGGAGAAG
TTTGCCAACGGGGAACTGAGCGCCCGGATGTTATTGAATGCTAGTGACGA
GGAACTCGTTGAGAAGTTGACTGCTGTGCGGGGCTTGGGCAAATGGTCTG
TTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGATAGATGTGTTTTCTACG
GGTGATTTGGGTGTACAATGACCCTGCGACGCTCCGCTCGTCTAACTGCA
GCGTCAGTGTCCAAGAACAACAGCACCACCACCACTGTCCCACATCTGCA
ACCCAAAACTCAAACAAAGAGAGCAGCCAGCAGAACTACAAACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4295CAN33_4295Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4295-T1CAN33_4295-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4295-T1.cdsCAN33_4295-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4295-T1.exon4CAN33_4295-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4295-T1.exon3CAN33_4295-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4295-T1.exon2CAN33_4295-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4295-T1.exon1CAN33_4295-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.1
NoteBUSCO:EOG09264X9R
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR003265
DBxrefPFAM:PF00730
ProductHhH-GPD superfamily base excision DNA repair protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:346915..348282 -
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