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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:409722..410728- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_42950-T1 ID=CAN33_42950-T1|Name=CAN33_42950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1007bp|location=Sequence derived from alignment at NKJJ01000022.1:409722..410728- (Aspergillus niger FDAARGOS_311)
ATGCCACTGTGGAACTGCTATCCATTCGATCCGGAGGTTGCACCGCTGTT
CGGTTATCACCCTTCTCTTACAGCTGGAATCCTTTTCACGATTGCTTTCC
TGGGTGTCTTAACAACCCATGTCTCGCAAGCATGCAATACCATATATCCC
TGGATAGGACTGGTGCTTTCGATTGGAGCTGCCCTTGAGTTTATCGGATG
GCTTGCCCGTACTTTGGCTTACCGCTGTCCATATACCTTTGCCATATGGC
AAATACAGCTGTCAACTCTGATGTCGGGTAAGTATACAGTTGAGGAAGTT
TATATTGGCAATGCCCCTGGCTAAACATACAACTAGCTCCATACTTTACA
ACCGTCGGAATCTACGGAGTCTTAGATCTCATGTACGCAGTTATAGACCA
AGTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGATATCTGCATGACTA
TCGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGGGTTCGCTGGCACAC
AAGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACAGTCAGCCTGGGAAT
CGATATCCTGTACGCAGGCAGTCTCGTACAGCTCCTGTCGCTCAATATCT
TCATGGTGCTGTTCGGGTACCTGATAATTCGTACCAGACAGCGACTTGTC
TGGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTTGCGTTTGCTTTAGT
TTGTATAATTGTTCGGGATACATATCGCATTGTGGAGTCTACGAATGGAT
GGCGTGGTTATTCCTACACATATGAAATTCTAGGGTGTCTTTTCGATGGG
CTGCCTATGTTTATCGCCAATGTTACGCTGAGTATCTGGCATCCAGCAGT
GTTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGTTGTGCGAGCGGAGG
AGGTCGAATTACGAAGCAGAGAAGATCAGAACGGACGAGGAAGTCGCTTG
CTTGACGAGTACCCACCTATTTCTGAGGAGCTTGAGCCAGTTCTCCGTAA
ACGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:409722..410728- >CAN33_42950-T1 ID=CAN33_42950-T1|Name=CAN33_42950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1896bp|location=Sequence derived from alignment at NKJJ01000022.1:409722..410728- (Aspergillus niger FDAARGOS_311)
CTCCATACTTTACAACCGTCGGAATCTACGGAGTCTTAGATCTCATGTAC
GCAGTTATAGACCAAGTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGA
TATCTGCATGACTATCGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGG
GTTCGCTGGCACACAAGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACA
GTCAGCCTGGGAATCGATATCCTGTACGCAGGCAGTCTCGTACAGCTCCT
GTCGCTCAATATCTTCATGGTGCTGTTCGGGTACCTGATAATTCGTACCA
GACAGCGACTTGTCTGGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTT
GCGTTTGCTTTAGTTTGTATAATTGTTCGGGATACATATCGCATTGTGGA
GTCTACGAATGGATGGCGTGGTTATTCCTACACATATGAAATTCTAGGGT
GTCTTTTCGATGGGCTGCCTATGTTTATCGCCAATGTTACGCTGAGTATC
TGGCATCCAGCAGTGTTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGT
TGTGCGAGCGGAGGAGGTCGAATTACGAAGCAGAGAAGATCAGAACGGAC
GAGGAAGTCGCTTGCTTGACGAGTACCCACCTATTTCTGAGGAGCTTGAG
CCAGTTCTCCGTAAACGATAGATGCCACTGTGGAACTGCTATCCATTCGA
TCCGGAGGTTGCACCGCTGTTCGGTTATCACCCTTCTCTTACAGCTGGAA
TCCTTTTCACGATTGCTTTCCTGGGTGTCTTAACAACCCATGTCTCGCAA
GCATGCAATACCATATATCCCTGGATAGGACTGGTGCTTTCGATTGGAGC
TGCCCTTGAGTTTATCGGATGGCTTGCCCGTACTTTGGCTTACCGCTGTC
CATATACCTTTGCCATATGGCAAATACAGCTGTCAACTCTGATGTCGGCT
CCATACTTTACAACCGTCGGAATCTACGGAGTCTTAGATCTCATGTACGC
AGTTATAGACCAAGTTCGACTACCTTTCAGGCCGAAGCGGTGGGCAGATA
TCTGCATGACTATCGCGCTTCTTAGTCTCATTCTCCAGGTTATTGGGGGT
TCGCTGGCACACAAGGCCTCCAGTGTCGCCTCCAGTGTCGATAAAACAGT
CAGCCTGGGAATCGATATCCTGTACGCAGGCAGTCTCGTACAGCTCCTGT
CGCTCAATATCTTCATGGTGCTGTTCGGGTACCTGATAATTCGTACCAGA
CAGCGACTTGTCTGGAGGATGCCAATGCTCAAAATGTTAGCTGTGCTTGC
GTTTGCTTTAGTTTGTATAATTGTTCGGGATACATATCGCATTGTGGAGT
CTACGAATGGATGGCGTGGTTATTCCTACACATATGAAATTCTAGGGTGT
CTTTTCGATGGGCTGCCTATGTTTATCGCCAATGTTACGCTGAGTATCTG
GCATCCAGCAGTGTTGTTGAACGAGGCGATGCTAATGGAGTCGAGAGTTG
TGCGAGCGGAGGAGGTCGAATTACGAAGCAGAGAAGATCAGAACGGACGA
GGAAGTCGCTTGCTTGACGAGTACCCACCTATTTCTGAGGAGCTTGAGCC
AGTTCTCCGTAAACGATAGATGCCACTGTGGAACTGCTATCCATTCGATC
CGGAGGTTGCACCGCTGTTCGGTTATCACCCTTCTCTTACAGCTGGAATC
CTTTTCACGATTGCTTTCCTGGGTGTCTTAACAACCCATGTCTCGCAAGC
ATGCAATACCATATATCCCTGGATAGGACTGGTGCTTTCGATTGGAGCTG
CCCTTGAGTTTATCGGATGGCTTGCCCGTACTTTGGCTTACCGCTGTCCA
TATACCTTTGCCATATGGCAAATACAGCTGTCAACTCTGATGTCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:409722..410728 - |
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