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CAN33_42980-T1, CAN33_42980-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42980-T1
Unique NameCAN33_42980-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:429214..430599+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42980-T1 ID=CAN33_42980-T1|Name=CAN33_42980-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1386bp|location=Sequence derived from alignment at NKJJ01000022.1:429214..430599+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACATGTCCGGCGAACAGATGCAGGCTAAGATTACCGCGGCTAG
GCGCGAAGCCGAAGGCCTGAAGGACAAGATCAAGCGCAGAAAGGATGAGT
TGGCCGATACGACTCGTACGCTTCCCTCTTCCCTTTCGCACCTCATGGCC
TCTCCTCTCGCAATGGAGAGACAACAGCCATCGTTGTACTGGTGATTGGT
CGTGTGTTTCGATTTGCTGACTCTGGTTCCTTCTTTCCCCCCCAACAGTC
CGTCAAGTCGCGCAGAACCAAACTGAAACCTTGCCTCGTATTGGTATGAA
GCCCCGGCGGACGCTCAAGGGACATTTGGCCAAGATCTACGCCATGCATT
GGTCGACCGACCGCCGTCATCTCGTCTCAGCCTCTCAGGACGGAAAGCTC
ATCATCTGGGACGCCTACACCACGAACAAGGTCCATGCGATCCCGCTGAG
GTCATCATGGGTCATGACCTGTGCCTATGCCCCGAGTGGAAACTACGTCG
CCTGCGGTGGTCTCGACAACATTTGCTCGATCTACAACCTCTCCTCTCGC
GAGGGTCCGACCCGTGTCGCGCGTGAGCTCTCCGGACACTCTGGCTACCT
CTCTTGCTGCCGGTTCATCAACGATCGCAGAATCATCACGTCTTCCGGCG
ACATGACTTGCATGCTGTGGGATATCGAATCGGGCTCGAAAGTTACTGAA
TTCGCTGATCACCTTGGCGACGTGATGTCAATCAGCATCAACCCGACAAA
CCAGAACGTTTTCGTTTCGGGCGCCTGTGATGCCTTCGCCAAGCTGTGGG
ACATTCGTACCGGAAAGGCGGTGCAAACTTTCGCTGGACACGAATCCGAC
ATCAACGCCATCCAGTTCTTCCCCGACGGAAACGCTTTCGGAACGGGTTC
CGACGACACCTCCTGCCGTCTGTTTGACATCCGTGCGGATCGCGAACTCA
ACACCTACCAGGTAATGCTGGCAATTTATATGGCGAATCCATCTGTGGCT
GACGAATGATGTTTCCAGAGCGACCAAATACTGTGCGGTATCACCTCCGT
TGCCTTCTCCGTCTCTGGCAGATTGCTTTTTGCTGGTTACGATGACTTCG
AGTGCAAGGTAAGACCTGAAATTATCCAAAGTCGCCGTATCATAGGCCAA
CCGGCTGATTTTGTTTTACTTGCAGGTCTGGGATGTTCTGCGCGGAGACA
AGGTTGGATCCCTGAGTGGTCACGAGAACCGCGTAAGCTGCCTGGGAGTC
AGCAACGATGGCATCAGCTTGTGCACTGGATCCTGGGATTCTCTGGTAAG
CTTAGCGAGAGCATCACTTTTGTTGACTGGGCTGTGCAGCATACTAATCG
TCTTCCGTCTTACAGCTCAAGGTCTGGGCTTGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:429214..430599+

>CAN33_42980-T1 ID=CAN33_42980-T1|Name=CAN33_42980-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5295bp|location=Sequence derived from alignment at NKJJ01000022.1:429214..430599+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACATGTCCGGCGAACAGATGCAGGCTAAGATTACCGCGGCTAG
GCGCGAAGCCGAAGGCCTGAAGGACAAGATCAAGCGCAGAAAGGATGAGT
TGGCCGATACGACTCTCCGTCAAGTCGCGCAGAACCAAACTGAAACCTTG
CCTCGTATTGGTATGAAGCCCCGGCGGACGCTCAAGGGACATTTGGCCAA
GATCTACGCCATGCATTGGTCGACCGACCGCCGTCATCTCGTCTCAGCCT
CTCAGGACGGAAAGCTCATCATCTGGGACGCCTACACCACGAACAAGGTC
CATGCGATCCCGCTGAGGTCATCATGGGTCATGACCTGTGCCTATGCCCC
GAGTGGAAACTACGTCGCCTGCGGTGGTCTCGACAACATTTGCTCGATCT
ACAACCTCTCCTCTCGCGAGGGTCCGACCCGTGTCGCGCGTGAGCTCTCC
GGACACTCTGGCTACCTCTCTTGCTGCCGGTTCATCAACGATCGCAGAAT
CATCACGTCTTCCGGCGACATGACTTGCATGCTGTGGGATATCGAATCGG
GCTCGAAAGTTACTGAATTCGCTGATCACCTTGGCGACGTGATGTCAATC
AGCATCAACCCGACAAACCAGAACGTTTTCGTTTCGGGCGCCTGTGATGC
CTTCGCCAAGCTGTGGGACATTCGTACCGGAAAGGCGGTGCAAACTTTCG
CTGGACACGAATCCGACATCAACGCCATCCAGTTCTTCCCCGACGGAAAC
GCTTTCGGAACGGGTTCCGACGACACCTCCTGCCGTCTGTTTGACATCCG
TGCGGATCGCGAACTCAACACCTACCAGAGCGACCAAATACTGTGCGGTA
TCACCTCCGTTGCCTTCTCCGTCTCTGGCAGATTGCTTTTTGCTGGTTAC
GATGACTTCGAGTGCAAGGTCTGGGATGTTCTGCGCGGAGACAAGGTTGG
ATCCCTGAGTGGTCACGAGAACCGCGTAAGCTGCCTGGGAGTCAGCAACG
ATGGCATCAGCTTGTGCACTGGATCCTGGGATTCTCTGCTCAAGGTCTGG
GCTTGGTAAATGGCCGACATGTCCGGCGAACAGATGCAGGCTAAGATTAC
CGCGGCTAGGCGCGAAGCCGAAGGCCTGAAGGACAAGATCAAGCGCAGAA
AGGATGAGTTGGCCGATACGACTCTCCGTCAAGTCGCGCAGAACCAAACT
GAAACCTTGCCTCGTATTGGTATGAAGCCCCGGCGGACGCTCAAGGGACA
TTTGGCCAAGATCTACGCCATGCATTGGTCGACCGACCGCCGTCATCTCG
TCTCAGCCTCTCAGGACGGAAAGCTCATCATCTGGGACGCCTACACCACG
AACAAGGTCCATGCGATCCCGCTGAGGTCATCATGGGTCATGACCTGTGC
CTATGCCCCGAGTGGAAACTACGTCGCCTGCGGTGGTCTCGACAACATTT
GCTCGATCTACAACCTCTCCTCTCGCGAGGGTCCGACCCGTGTCGCGCGT
GAGCTCTCCGGACACTCTGGCTACCTCTCTTGCTGCCGGTTCATCAACGA
TCGCAGAATCATCACGTCTTCCGGCGACATGACTTGCATGCTGTGGGATA
TCGAATCGGGCTCGAAAGTTACTGAATTCGCTGATCACCTTGGCGACGTG
ATGTCAATCAGCATCAACCCGACAAACCAGAACGTTTTCGTTTCGGGCGC
CTGTGATGCCTTCGCCAAGCTGTGGGACATTCGTACCGGAAAGGCGGTGC
AAACTTTCGCTGGACACGAATCCGACATCAACGCCATCCAGTTCTTCCCC
GACGGAAACGCTTTCGGAACGGGTTCCGACGACACCTCCTGCCGTCTGTT
TGACATCCGTGCGGATCGCGAACTCAACACCTACCAGAGCGACCAAATAC
TGTGCGGTATCACCTCCGTTGCCTTCTCCGTCTCTGGCAGATTGCTTTTT
GCTGGTTACGATGACTTCGAGTGCAAGGTCTGGGATGTTCTGCGCGGAGA
CAAGGTTGGATCCCTGAGTGGTCACGAGAACCGCGTAAGCTGCCTGGGAG
TCAGCAACGATGGCATCAGCTTGTGCACTGGATCCTGGGATTCTCTGCTC
AAGGTCTGGGCTTGGTAAATGGCCGACATGTCCGGCGAACAGATGCAGGC
TAAGATTACCGCGGCTAGGCGCGAAGCCGAAGGCCTGAAGGACAAGATCA
AGCGCAGAAAGGATGAGTTGGCCGATACGACTCTCCGTCAAGTCGCGCAG
AACCAAACTGAAACCTTGCCTCGTATTGGTATGAAGCCCCGGCGGACGCT
CAAGGGACATTTGGCCAAGATCTACGCCATGCATTGGTCGACCGACCGCC
GTCATCTCGTCTCAGCCTCTCAGGACGGAAAGCTCATCATCTGGGACGCC
TACACCACGAACAAGGTCCATGCGATCCCGCTGAGGTCATCATGGGTCAT
GACCTGTGCCTATGCCCCGAGTGGAAACTACGTCGCCTGCGGTGGTCTCG
ACAACATTTGCTCGATCTACAACCTCTCCTCTCGCGAGGGTCCGACCCGT
GTCGCGCGTGAGCTCTCCGGACACTCTGGCTACCTCTCTTGCTGCCGGTT
CATCAACGATCGCAGAATCATCACGTCTTCCGGCGACATGACTTGCATGC
TGTGGGATATCGAATCGGGCTCGAAAGTTACTGAATTCGCTGATCACCTT
GGCGACGTGATGTCAATCAGCATCAACCCGACAAACCAGAACGTTTTCGT
TTCGGGCGCCTGTGATGCCTTCGCCAAGCTGTGGGACATTCGTACCGGAA
AGGCGGTGCAAACTTTCGCTGGACACGAATCCGACATCAACGCCATCCAG
TTCTTCCCCGACGGAAACGCTTTCGGAACGGGTTCCGACGACACCTCCTG
CCGTCTGTTTGACATCCGTGCGGATCGCGAACTCAACACCTACCAGAGCG
ACCAAATACTGTGCGGTATCACCTCCGTTGCCTTCTCCGTCTCTGGCAGA
TTGCTTTTTGCTGGTTACGATGACTTCGAGTGCAAGGTCTGGGATGTTCT
GCGCGGAGACAAGGTTGGATCCCTGAGTGGTCACGAGAACCGCGTAAGCT
GCCTGGGAGTCAGCAACGATGGCATCAGCTTGTGCACTGGATCCTGGGAT
TCTCTGCTCAAGGTCTGGGCTTGGTAAATGGCCGACATGTCCGGCGAACA
GATGCAGGCTAAGATTACCGCGGCTAGGCGCGAAGCCGAAGGCCTGAAGG
ACAAGATCAAGCGCAGAAAGGATGAGTTGGCCGATACGACTCTCCGTCAA
GTCGCGCAGAACCAAACTGAAACCTTGCCTCGTATTGGTATGAAGCCCCG
GCGGACGCTCAAGGGACATTTGGCCAAGATCTACGCCATGCATTGGTCGA
CCGACCGCCGTCATCTCGTCTCAGCCTCTCAGGACGGAAAGCTCATCATC
TGGGACGCCTACACCACGAACAAGGTCCATGCGATCCCGCTGAGGTCATC
ATGGGTCATGACCTGTGCCTATGCCCCGAGTGGAAACTACGTCGCCTGCG
GTGGTCTCGACAACATTTGCTCGATCTACAACCTCTCCTCTCGCGAGGGT
CCGACCCGTGTCGCGCGTGAGCTCTCCGGACACTCTGGCTACCTCTCTTG
CTGCCGGTTCATCAACGATCGCAGAATCATCACGTCTTCCGGCGACATGA
CTTGCATGCTGTGGGATATCGAATCGGGCTCGAAAGTTACTGAATTCGCT
GATCACCTTGGCGACGTGATGTCAATCAGCATCAACCCGACAAACCAGAA
CGTTTTCGTTTCGGGCGCCTGTGATGCCTTCGCCAAGCTGTGGGACATTC
GTACCGGAAAGGCGGTGCAAACTTTCGCTGGACACGAATCCGACATCAAC
GCCATCCAGTTCTTCCCCGACGGAAACGCTTTCGGAACGGGTTCCGACGA
CACCTCCTGCCGTCTGTTTGACATCCGTGCGGATCGCGAACTCAACACCT
ACCAGAGCGACCAAATACTGTGCGGTATCACCTCCGTTGCCTTCTCCGTC
TCTGGCAGATTGCTTTTTGCTGGTTACGATGACTTCGAGTGCAAGGTCTG
GGATGTTCTGCGCGGAGACAAGGTTGGATCCCTGAGTGGTCACGAGAACC
GCGTAAGCTGCCTGGGAGTCAGCAACGATGGCATCAGCTTGTGCACTGGA
TCCTGGGATTCTCTGCTCAAGGTCTGGGCTTGGTAAATGGCCGACATGTC
CGGCGAACAGATGCAGGCTAAGATTACCGCGGCTAGGCGCGAAGCCGAAG
GCCTGAAGGACAAGATCAAGCGCAGAAAGGATGAGTTGGCCGATACGACT
CTCCGTCAAGTCGCGCAGAACCAAACTGAAACCTTGCCTCGTATTGGTAT
GAAGCCCCGGCGGACGCTCAAGGGACATTTGGCCAAGATCTACGCCATGC
ATTGGTCGACCGACCGCCGTCATCTCGTCTCAGCCTCTCAGGACGGAAAG
CTCATCATCTGGGACGCCTACACCACGAACAAGGTCCATGCGATCCCGCT
GAGGTCATCATGGGTCATGACCTGTGCCTATGCCCCGAGTGGAAACTACG
TCGCCTGCGGTGGTCTCGACAACATTTGCTCGATCTACAACCTCTCCTCT
CGCGAGGGTCCGACCCGTGTCGCGCGTGAGCTCTCCGGACACTCTGGCTA
CCTCTCTTGCTGCCGGTTCATCAACGATCGCAGAATCATCACGTCTTCCG
GCGACATGACTTGCATGCTGTGGGATATCGAATCGGGCTCGAAAGTTACT
GAATTCGCTGATCACCTTGGCGACGTGATGTCAATCAGCATCAACCCGAC
AAACCAGAACGTTTTCGTTTCGGGCGCCTGTGATGCCTTCGCCAAGCTGT
GGGACATTCGTACCGGAAAGGCGGTGCAAACTTTCGCTGGACACGAATCC
GACATCAACGCCATCCAGTTCTTCCCCGACGGAAACGCTTTCGGAACGGG
TTCCGACGACACCTCCTGCCGTCTGTTTGACATCCGTGCGGATCGCGAAC
TCAACACCTACCAGAGCGACCAAATACTGTGCGGTATCACCTCCGTTGCC
TTCTCCGTCTCTGGCAGATTGCTTTTTGCTGGTTACGATGACTTCGAGTG
CAAGGTCTGGGATGTTCTGCGCGGAGACAAGGTTGGATCCCTGAGTGGTC
ACGAGAACCGCGTAAGCTGCCTGGGAGTCAGCAACGATGGCATCAGCTTG
TGCACTGGATCCTGGGATTCTCTGCTCAAGGTCTGGGCTTGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GB1CAN33_42980Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42980-T1CAN33_42980-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42980-T1.exon1CAN33_42980-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42980-T1.exon2CAN33_42980-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_42980-T1.exon3CAN33_42980-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_42980-T1.exon4CAN33_42980-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_42980-T1.exon5CAN33_42980-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42980-T1.cdsCAN33_42980-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG092645OU
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefInterPro:IPR001632
DBxrefPFAM:PF00400
ProductGuanine nucleotide-binding protein subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:429214..430599 +
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