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CAN33_43015-T1, CAN33_43015-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43015-T1
Unique NameCAN33_43015-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:455540..456310+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43015-T1 ID=CAN33_43015-T1|Name=CAN33_43015-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=771bp|location=Sequence derived from alignment at NKJJ01000022.1:455540..456310+ (Aspergillus niger FDAARGOS_311)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGTATGTCGATCACCC
TCACTTTCTGGGGTAGTTCACATTCCCGGAAGTATTCTGACCCTTCTCTG
ACTATTATGACCAAAATCATTAGATACCCAACTGGCCGATCGCACGGTTC
ACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCG
CAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCAAAACGCCGAC
AGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTCCTAGCAACAC
GTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAG
CTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCA
GGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCTCATCTTCAAC
TACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTG
GAGGTTTGCTGCTCCGTTACCTCCTTTTGTGACTCCTTCTGCTGTTGCTG
ACACCACTTTAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACT
GAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATC
TCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAAC
GCTGCCTCTGAGTTCTCATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:455540..456310+

>CAN33_43015-T1 ID=CAN33_43015-T1|Name=CAN33_43015-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1872bp|location=Sequence derived from alignment at NKJJ01000022.1:455540..456310+ (Aspergillus niger FDAARGOS_311)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCG
ATCGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGAT
CCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAG
CAAAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTC
TCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAA
CTGCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAA
GAGAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTG
CTCATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAG
GCAAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCA
ACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAG
ATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATG
AACGCTGCCTCTGAGTTCTCATAGATGGCCCACTGGAAAGAGGAGTACTC
CGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCT
ACGATGCTTATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACG
GCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACC
CGACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCAC
AAGACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCA
GAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGAC
CACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGA
TCCGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGAT
CGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGGATTTCCAAGA
CGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGGTCAT
CCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGCTAGA
ATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCATAGAT
GGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGAC
GAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCGAT
CGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCC
GGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCA
AAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTC
CTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACT
GCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGA
GAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCT
CATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGC
AAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAAC
TGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGAT
CTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAA
CGCTGCCTCTGAGTTCTCATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG16CAN33_43015Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43015-T1.exon1CAN33_43015-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_43015-T1.exon2CAN33_43015-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43015-T1.exon3CAN33_43015-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43015-T1.cdsCAN33_43015-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43015-T1CAN33_43015-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013923
DBxrefPFAM:PF08614
Product interacts with Atg12p-Atg5p
Productautophagy protein 16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:455540..456310 +
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