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CAN33_43035-T1, CAN33_43035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43035-T1
Unique NameCAN33_43035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:468584..470263-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43035-T1 ID=CAN33_43035-T1|Name=CAN33_43035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1680bp|location=Sequence derived from alignment at NKJJ01000022.1:468584..470263- (Aspergillus niger FDAARGOS_311)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:468584..470263-

>CAN33_43035-T1 ID=CAN33_43035-T1|Name=CAN33_43035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1680bp|location=Sequence derived from alignment at NKJJ01000022.1:468584..470263- (Aspergillus niger FDAARGOS_311)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IRS4CAN33_43035Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43035-T1.cdsCAN33_43035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43035-T1.exon1CAN33_43035-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43035-T1CAN33_43035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR000261
DBxrefPFAM:PF12763
ProductIncreased rDNA silencing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:468584..470263 -
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