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CAN33_43075-T1, CAN33_43075-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43075-T1
Unique NameCAN33_43075-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:496876..497345-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43075-T1 ID=CAN33_43075-T1|Name=CAN33_43075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=470bp|location=Sequence derived from alignment at NKJJ01000022.1:496876..497345- (Aspergillus niger FDAARGOS_311)
ATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGACCATGTT
CCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTATCAAGG
CGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAGTCGGTT
TTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAAGCGGGG
TTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACAACAAGC
TCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGGCGCAAA
GCCCCGTTTTGGTGAGTGGATCCCTCAATCGCGGTGCCTGGGGCTACTAC
TGATCCCTCTGCAGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGC
CGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTT
CCGATGAGTCGGATGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:496876..497345-

>CAN33_43075-T1 ID=CAN33_43075-T1|Name=CAN33_43075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=834bp|location=Sequence derived from alignment at NKJJ01000022.1:496876..497345- (Aspergillus niger FDAARGOS_311)
GCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGCCGACGACTCGGACG
AAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTTCCGATGAGTCGGAT
GCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGAC
CATGTTCCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTA
TCAAGGCGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAG
TCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAA
GCGGGGTTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACA
ACAAGCTCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGG
CGCAAAGCCCCGTTTTGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGT
CGCCGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTT
CTTCCGATGAGTCGGATGCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTC
GCTACGGCGGAAGAGACCATGTTCCCGCCGGATGAGCTGTCTCAGGGCCA
TCTAATTGCCCGGGCTATCAAGGCGACCGGAAACAACATCTACTCGGTGG
AACTTCCCTCGAAGGAGTCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGA
TCGACCATCTGGATCAAGCGGGGTTCCTACGTGGTCATCGATACCAATGC
TCTTGAGGGCCGCGACAACAAGCTCAAGGGAGAAATAGTCAACATCGTTC
GTGATGAGAAAGCGTGGCGCAAAGCCCCGTTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_43075CAN33_43075Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43075-T1CAN33_43075-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43075-T1.cdsCAN33_43075-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43075-T1.exon2CAN33_43075-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43075-T1.exon1CAN33_43075-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR006196
DBxrefInterPro:IPR001253
DBxrefPFAM:PF01176
ProductTranslation initiation factor 1A / IF-1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:496876..497345 -
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