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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:570535..572472+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_43180-T1 ID=CAN33_43180-T1|Name=CAN33_43180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1938bp|location=Sequence derived from alignment at NKJJ01000022.1:570535..572472+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGA
TGAGGACGATGCCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTA
CTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC
GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGG
CGCGTTCCTCATGTCCTTGGATATTTTCGTCATCGCAACCGTATTACTAC
CAGTCCCTCGTGCTATTCCGATAAGATCCAACTGAAAATTATCTGACCCC
CCGGATAGGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAA
TTGGCCTGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCATTGACTCC
GTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATCTACATAT
CGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCC
AACAGCAACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATCGGAGCATC
AGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCTCCCGAGA
AATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGC
CTAATTCTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGATACTACCTG
GCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACGCTGCTCT
CTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTT
GCACAGCGAATATTAGACCTGGACCTCATTGGGTGTGCCATTTTTGTTCC
GGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACGAAGGAGG
CTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCA
TTTATCATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAATGCAATGGT
ACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTCCTGTTTT
CCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAG
TGGTTTCAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGTACGCGGGT
TTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCTGGGTTTC
TAGGTATGCTTCTATACATATACTCACTCAGCCACGTCTTAGTTCTTGAA
ATATCCATGGATACAGAGATGCTGACATTGAGGAATTCGTACAGCACGGA
AAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGC
ACCGCCGCAGCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAG
CCATTGGATCGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATGGCTC
AACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAA
CTCATGCCGGTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGC
CACTATCATGCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTATATC
CCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTG
TCTGCGGGTGGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCC
GGATCTTCTGCACTCGGTTCTGGAGGCGTATAATACCGCTATTACTTCGA
CTTTTGTAAGTAGGCCTTCTTCTTCCGCGCTATTGTAGTGTGAGTGAGAC
TAACAGACATGAGCACAATAGTACGTTGCTGTTGGTACTACAGCTACGGC
CTTCTTCCTGGCTTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGGA
CGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:570535..572472+ >CAN33_43180-T1 ID=CAN33_43180-T1|Name=CAN33_43180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6852bp|location=Sequence derived from alignment at NKJJ01000022.1:570535..572472+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGA
TGAGGACGATGCCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTA
CTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC
GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGG
CGCGTTCCTCATGTCCTTGGATATTTTCGTCATCGCAACCGCCATCCCAT
CTATCACGTCCGACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCT
GCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAG
CTCATCATTTCCCCTCCGCTGGATCTACATATCGTTCTTCTCTATATTTA
TGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATT
GTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGG
CTTCGTTATTGTGCTCACCGTTTCTCCCGAGAAATCGAAACCATTGTTGT
TAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTC
ATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGT
GAACCTTCCCCCCGGGGCGCTGACGCTGCTCTCTATGCTCTTTTTGTTCA
AACCTCCATCAATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGAC
CTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCT
TCTTGCTATGATGTGGGGTGGTACGAAGGAGGCTTGGAACTCAGCGACAA
CAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTA
TGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGC
CAGACGAACAGTCACATTCTGTGTCCTGTTTTCCTTCTGCCACTTCGGCT
CTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAA
GGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTC
CCAAATAGTTGGCACACTCTTTGCTGGGTTTCTAGCACGGAAAGTCCACT
ACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCA
GCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGAT
CGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATGGCTCAACAAATGC
CATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCG
GTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCAT
GCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTATATCCCGAATTGG
CAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGT
GGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCT
GCACTCGGTTCTGGAGGCGTATAATACCGCTATTACTTCGACTTTTTACG
TTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAG
TGGGAGAGGATTACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGAC
AGAACATAAGTAGATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCA
CCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGCTCAGGCTCATGAT
GATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGA
GGCGAATCCAAACGCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGG
GCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATATTTTCGTCATCGCA
ACCGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGC
CTGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAG
CAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATCTACATATCGTTC
TTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAG
CAACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTG
TCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCTCCCGAGAAATCG
AAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAAT
TCTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGT
GGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACGCTGCTCTCTATG
CTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACA
GCGAATATTAGACCTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAG
TCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACGAAGGAGGCTTGG
AACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTAT
CATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGG
GAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTCCTGTTTTCCTTC
TGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTT
TCAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAG
CCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCTGGGTTTCTAGCA
CGGAAAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCAT
GTGCACCGCCGCAGCCCTGTACACTCATTTCTCAGCATTCCACACCCCCT
CCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATG
GCTCAACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCC
AGAACTCATGCCGGTCGCGATATCCCTGAATCTATTCTTTCAATACCTAG
GCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTA
TATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTT
GCTGTCTGCGGGTGGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACT
TTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAATACCGCTATTACT
TCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGC
TTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGGACGACTGATCCGG
AGGGGGCCGAGACAGAACATAAGTAGATGGCTGCACCTGCTCCAAACGAA
GCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGC
TCAGGCTCATGATGATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACG
CCCCAGAAACGGAGGCGAATCCAAACGCCATGCACGGTTTCAAGCTTTTT
GCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATAT
TTTCGTCATCGCAACCGCCATCCCATCTATCACGTCCGACTTCCACGATA
CCGCACAATTGGCCTGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCA
TTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGAT
CTACATATCGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTT
TCGCTCCCAACAGCAACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATC
GGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTC
TCCCGAGAAATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCG
CTATGGGCCTAATTCTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGAT
ACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGAC
GCTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATA
AAACCGTTGCACAGCGAATATTAGACCTGGACCTCATTGGGTGTGCCATT
TTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTAC
GAAGGAGGCTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCG
GTGTGGCATTTATCATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAAT
GCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGT
CCTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATC
TCCCAGAGTGGTTTCAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGT
ACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGC
TGGGTTTCTAGCACGGAAAGTCCACTACTACAATCCATGGCTCCATATCG
GACCTCTCTTCATGTGCACCGCCGCAGCCCTGTACACTCATTTCTCAGCA
TTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCT
TGGCGTCGGCATGGCTCAACAAATGCCATCACTCATTGTTCAGCACACTG
TGCGTGACAAGCCAGAACTCATGCCGGTCGCGATATCCCTGAATCTATTC
TTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTT
TCGTTCTGTCCTATATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCG
AGCAGATTGCGTTGCTGTCTGCGGGTGGGATGGCAGATGTGCGTAATACC
GTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAA
TACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGG
CCTTCTTCCTGGCTTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGG
ACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAGATGGCTGCACC
TGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATG
CCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTACTAGCACAGAG
GCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAACGCCATGCACGG
TTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCA
TGTCCTTGGATATTTTCGTCATCGCAACCGCCATCCCATCTATCACGTCC
GACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCTGCCTACTCGCT
CACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTC
CCCTCCGCTGGATCTACATATCGTTCTTCTCTATATTTATGGTCGGCAGT
TTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATTGTCGGTCGCGC
AATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTG
TGCTCACCGTTTCTCCCGAGAAATCGAAACCATTGTTGTTAGGCATATGC
AGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTCATTGGCGGCGC
TTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCC
CCGGGGCGCTGACGCTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCA
ATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGACCTGGACCTCAT
TGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGA
TGTGGGGTGGTACGAAGGAGGCTTGGAACTCAGCGACAACAATCGGACTA
TTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTATGGGAAGGCTA
TAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAG
TCACATTCTGTGTCCTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATC
CTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAAGGGGCCTCTCC
ATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTG
GCACACTCTTTGCTGGGTTTCTAGCACGGAAAGTCCACTACTACAATCCA
TGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCAGCCCTGTACAC
TCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAG
TCATCCAGGGTCTTGGCGTCGGCATGGCTCAACAAATGCCATCACTCATT
GTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCGGTCGCGATATC
CCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTG
GCGGTATTGTGTTTCGTTCTGTCCTATATCCCGAATTGGCAGATCATGCT
GGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGTGGGATGGCAGA
TGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTC
TGGAGGCGTATAATACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGT
ACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAGTGGGAGAGGAT
TACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000221.3 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | major facilitator superfamily protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:570535..572472 + |
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