You are here

Home

CAN33_43200-T1, CAN33_43200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43200-T1
Unique NameCAN33_43200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:579886..581233-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43200-T1 ID=CAN33_43200-T1|Name=CAN33_43200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1348bp|location=Sequence derived from alignment at NKJJ01000022.1:579886..581233- (Aspergillus niger FDAARGOS_311)
ATGAACATCCGAAAACTTTCAGTAGGCATCTTCGCCGCTGTCAAGTCCGT
CTGGACTCGCGGCAGCCCATTTGCCGCGCTCACAGCCCTATGGCCTACAA
ATGAGGAGAGCAAATTCATCATTCAGTCAGAAGGCATTCGGCTGGCCTTT
ACGAATCACGGCGCAGCTGTTACAAACCTTTGGCTGAACAACACATCTGG
TGAGGAAATTGACGTCGTACTGGGCTTGGACGATGCGAGGGACTATCCGG
CGCTGCAGTCGAATCCATTTCTGAATGGGGTTATCGGTACGTTGTCGACG
TCAAGCTTCCGCTCATTCACTTGATTCTTTACTCTTTATCCTTTTCCGTA
CTCTGAATTAAAACGAATCTACAAACATCAGGTCGATATGCCGGCTTCCT
AAGCAACTCCAGCTATCCAGTAGATGGAACAATCTACCCCGTAACGGCAA
ATGCACACAATCACACCTCGCTATTCAACGGCGGAGATAAGGGCTGGGGC
CGGCAAACCTGGGACATCGCAGTGCATATCAATAACAGCATTACTTTCGT
GTTGTTCGACAACAGATGGAATGGATTTCCTGGGATCTTTGCCTCGTGCG
TGACACACACAGTTACGCCGTATGAGTGGCGTATTGCGTTTGGGGTCACG
CCTCTGCTGCAAGCGGGTCCGATCAATTTGAGTCAACAAGTTTTCTTCAA
CCTTGATGGATTCAGGAAAAATAATGCCAGCATTGGTGGGACCGATTATA
GCACGGTTCTTGATCATCGGCTGAGGCTTCCTGTTGCTGGAATGCGGTTT
GATGTGGACGAGCGAGGGATTCCAACAGGTGATTTGAGGAGTAATAGGGA
GGGAACAGAGTACGACTTTTGGTCTGCGGATAAGACTGTTGGCGAGGCGG
TAAGAAAGGGCCATGCCGGGTTGGACGTCACTTATGCTCTTTCCCACAAA
CCGTCTAGCGACAAAGAAGATGAGCCTGTGGCCGTACTCTCCTCGGAACT
TTCTGGTGTCACCATGGAGCTCTATACTGACCAAGATGCTCTTCATGTCC
ATTTGTGGGATCAAAATACCTTGGGTATGTATACTGTTTGTCCTCTGCTA
AACAGGACCGACTACTAATTTTGTGGATAGGTGACCTCCAATTAAAGAAA
GATCAGGGAGCAGGCAAAGTTCCTCAACACGCCGCGATATCTATAGAGAT
GCAAGACTGGCCAGATGCCGTCCATCATCCGGAATGGAGAAACAGGAAGA
CCATCTGGGGAATGGATAGGCTGTATACGCGGTTTGCAACATACAAGTTC
TCGATAAAGGGAAGAGGGGATCAAATAAGGACATACAAATCATTGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:579886..581233-

>CAN33_43200-T1 ID=CAN33_43200-T1|Name=CAN33_43200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3591bp|location=Sequence derived from alignment at NKJJ01000022.1:579886..581233- (Aspergillus niger FDAARGOS_311)
GTGACCTCCAATTAAAGAAAGATCAGGGAGCAGGCAAAGTTCCTCAACAC
GCCGCGATATCTATAGAGATGCAAGACTGGCCAGATGCCGTCCATCATCC
GGAATGGAGAAACAGGAAGACCATCTGGGGAATGGATAGGCTGTATACGC
GGTTTGCAACATACAAGTTCTCGATAAAGGGAAGAGGGGATCAAATAAGG
ACATACAAATCATTGTAGGTCGATATGCCGGCTTCCTAAGCAACTCCAGC
TATCCAGTAGATGGAACAATCTACCCCGTAACGGCAAATGCACACAATCA
CACCTCGCTATTCAACGGCGGAGATAAGGGCTGGGGCCGGCAAACCTGGG
ACATCGCAGTGCATATCAATAACAGCATTACTTTCGTGTTGTTCGACAAC
AGATGGAATGGATTTCCTGGGATCTTTGCCTCGTGCGTGACACACACAGT
TACGCCGTATGAGTGGCGTATTGCGTTTGGGGTCACGCCTCTGCTGCAAG
CGGGTCCGATCAATTTGAGTCAACAAGTTTTCTTCAACCTTGATGGATTC
AGGAAAAATAATGCCAGCATTGGTGGGACCGATTATAGCACGGTTCTTGA
TCATCGGCTGAGGCTTCCTGTTGCTGGAATGCGGTTTGATGTGGACGAGC
GAGGGATTCCAACAGGTGATTTGAGGAGTAATAGGGAGGGAACAGAGTAC
GACTTTTGGTCTGCGGATAAGACTGTTGGCGAGGCGGTAAGAAAGGGCCA
TGCCGGGTTGGACGTCACTTATGCTCTTTCCCACAAACCGTCTAGCGACA
AAGAAGATGAGCCTGTGGCCGTACTCTCCTCGGAACTTTCTGGTGTCACC
ATGGAGCTCTATACTGACCAAGATGCTCTTCATGTCCATTTGTGGGATCA
AAATACCTTGGATGAACATCCGAAAACTTTCAGTAGGCATCTTCGCCGCT
GTCAAGTCCGTCTGGACTCGCGGCAGCCCATTTGCCGCGCTCACAGCCCT
ATGGCCTACAAATGAGGAGAGCAAATTCATCATTCAGTCAGAAGGCATTC
GGCTGGCCTTTACGAATCACGGCGCAGCTGTTACAAACCTTTGGCTGAAC
AACACATCTGGTGAGGAAATTGACGTCGTACTGGGCTTGGACGATGCGAG
GGACTATCCGGCGCTGCAGTCGAATCCATTTCTGAATGGGGTTATCGGTG
ACCTCCAATTAAAGAAAGATCAGGGAGCAGGCAAAGTTCCTCAACACGCC
GCGATATCTATAGAGATGCAAGACTGGCCAGATGCCGTCCATCATCCGGA
ATGGAGAAACAGGAAGACCATCTGGGGAATGGATAGGCTGTATACGCGGT
TTGCAACATACAAGTTCTCGATAAAGGGAAGAGGGGATCAAATAAGGACA
TACAAATCATTGTAGGTCGATATGCCGGCTTCCTAAGCAACTCCAGCTAT
CCAGTAGATGGAACAATCTACCCCGTAACGGCAAATGCACACAATCACAC
CTCGCTATTCAACGGCGGAGATAAGGGCTGGGGCCGGCAAACCTGGGACA
TCGCAGTGCATATCAATAACAGCATTACTTTCGTGTTGTTCGACAACAGA
TGGAATGGATTTCCTGGGATCTTTGCCTCGTGCGTGACACACACAGTTAC
GCCGTATGAGTGGCGTATTGCGTTTGGGGTCACGCCTCTGCTGCAAGCGG
GTCCGATCAATTTGAGTCAACAAGTTTTCTTCAACCTTGATGGATTCAGG
AAAAATAATGCCAGCATTGGTGGGACCGATTATAGCACGGTTCTTGATCA
TCGGCTGAGGCTTCCTGTTGCTGGAATGCGGTTTGATGTGGACGAGCGAG
GGATTCCAACAGGTGATTTGAGGAGTAATAGGGAGGGAACAGAGTACGAC
TTTTGGTCTGCGGATAAGACTGTTGGCGAGGCGGTAAGAAAGGGCCATGC
CGGGTTGGACGTCACTTATGCTCTTTCCCACAAACCGTCTAGCGACAAAG
AAGATGAGCCTGTGGCCGTACTCTCCTCGGAACTTTCTGGTGTCACCATG
GAGCTCTATACTGACCAAGATGCTCTTCATGTCCATTTGTGGGATCAAAA
TACCTTGGATGAACATCCGAAAACTTTCAGTAGGCATCTTCGCCGCTGTC
AAGTCCGTCTGGACTCGCGGCAGCCCATTTGCCGCGCTCACAGCCCTATG
GCCTACAAATGAGGAGAGCAAATTCATCATTCAGTCAGAAGGCATTCGGC
TGGCCTTTACGAATCACGGCGCAGCTGTTACAAACCTTTGGCTGAACAAC
ACATCTGGTGAGGAAATTGACGTCGTACTGGGCTTGGACGATGCGAGGGA
CTATCCGGCGCTGCAGTCGAATCCATTTCTGAATGGGGTTATCGGTGACC
TCCAATTAAAGAAAGATCAGGGAGCAGGCAAAGTTCCTCAACACGCCGCG
ATATCTATAGAGATGCAAGACTGGCCAGATGCCGTCCATCATCCGGAATG
GAGAAACAGGAAGACCATCTGGGGAATGGATAGGCTGTATACGCGGTTTG
CAACATACAAGTTCTCGATAAAGGGAAGAGGGGATCAAATAAGGACATAC
AAATCATTGTAGGTCGATATGCCGGCTTCCTAAGCAACTCCAGCTATCCA
GTAGATGGAACAATCTACCCCGTAACGGCAAATGCACACAATCACACCTC
GCTATTCAACGGCGGAGATAAGGGCTGGGGCCGGCAAACCTGGGACATCG
CAGTGCATATCAATAACAGCATTACTTTCGTGTTGTTCGACAACAGATGG
AATGGATTTCCTGGGATCTTTGCCTCGTGCGTGACACACACAGTTACGCC
GTATGAGTGGCGTATTGCGTTTGGGGTCACGCCTCTGCTGCAAGCGGGTC
CGATCAATTTGAGTCAACAAGTTTTCTTCAACCTTGATGGATTCAGGAAA
AATAATGCCAGCATTGGTGGGACCGATTATAGCACGGTTCTTGATCATCG
GCTGAGGCTTCCTGTTGCTGGAATGCGGTTTGATGTGGACGAGCGAGGGA
TTCCAACAGGTGATTTGAGGAGTAATAGGGAGGGAACAGAGTACGACTTT
TGGTCTGCGGATAAGACTGTTGGCGAGGCGGTAAGAAAGGGCCATGCCGG
GTTGGACGTCACTTATGCTCTTTCCCACAAACCGTCTAGCGACAAAGAAG
ATGAGCCTGTGGCCGTACTCTCCTCGGAACTTTCTGGTGTCACCATGGAG
CTCTATACTGACCAAGATGCTCTTCATGTCCATTTGTGGGATCAAAATAC
CTTGGATGAACATCCGAAAACTTTCAGTAGGCATCTTCGCCGCTGTCAAG
TCCGTCTGGACTCGCGGCAGCCCATTTGCCGCGCTCACAGCCCTATGGCC
TACAAATGAGGAGAGCAAATTCATCATTCAGTCAGAAGGCATTCGGCTGG
CCTTTACGAATCACGGCGCAGCTGTTACAAACCTTTGGCTGAACAACACA
TCTGGTGAGGAAATTGACGTCGTACTGGGCTTGGACGATGCGAGGGACTA
TCCGGCGCTGCAGTCGAATCCATTTCTGAATGGGGTTATCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0016853isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_43200CAN33_43200Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43200-T1CAN33_43200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43200-T1.cdsCAN33_43200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43200-T1.exon3CAN33_43200-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43200-T1.exon2CAN33_43200-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43200-T1.exon1CAN33_43200-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.3
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR014718
DBxrefInterPro:IPR008183
DBxrefPFAM:PF01263
ProductAldose 1-epimerase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:579886..581233 -
Powered by Drupal