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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:653324..653900- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_43300-T1 ID=CAN33_43300-T1|Name=CAN33_43300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=577bp|location=Sequence derived from alignment at NKJJ01000022.1:653324..653900- (Aspergillus niger FDAARGOS_311)
ATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGG
CGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTA
AGGGTGTGAAGAGTATGGACTTTTGTAAGGTGAGCTGAAAGAACACTCCA
TTGACTGCTTTAAATCGGATCCGTCATTTGCAAGACGTCCAATTGGAGCT
ATCTGAAGTAGAAGAACGCGCAAGGCTCATATGGTTTACTGTAGGAATTC
AACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGCGCGTGT
CACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTCCCACTA
CCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAGAATCGC
ATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGATATCCCT
CAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGCGACTGT
CTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAGGCCAAA
TCCGTCGGCATCCAGGTTGTCCCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:653324..653900- >CAN33_43300-T1 ID=CAN33_43300-T1|Name=CAN33_43300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=924bp|location=Sequence derived from alignment at NKJJ01000022.1:653324..653900- (Aspergillus niger FDAARGOS_311)
GAATTCAACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGC
GCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTC
CCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAG
AATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGAT
ATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGC
GACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAG
GCCAAATCCGTCGGCATCCAGGTTGTCCCATGAATGGCGAAGAAGGCATT
GGCCAAGGACCAGATTGTGAAGCTCATTGTGGGCGCCGGTCAGGCCAGTC
CCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGTGTGAAGAGTATG
GACTTTTGTAAGGAATTCAACGCCAGAACTGCACACATCAACACCGGTGT
ACCCATTCCTGCGCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCG
ACCTCCGTACTCCCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTG
GAACCTCGCAAGAATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTT
CATCGGCAAGATATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGC
ACTCCGAGACGCGACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGT
GTCATTGCCCAGGCCAAATCCGTCGGCATCCAGGTTGTCCCATGAATGGC
GAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGGCGCCG
GTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGT
GTGAAGAGTATGGACTTTTGTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BG5 |
| DBxref | InterPro:IPR036769 |
| DBxref | InterPro:IPR036796 |
| DBxref | InterPro:IPR020783 |
| DBxref | InterPro:IPR020784 |
| DBxref | InterPro:IPR006519 |
| DBxref | InterPro:IPR000911 |
| DBxref | PFAM:PF03946 |
| DBxref | PFAM:PF00298 |
| Product | ribosomal protein L11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:653324..653900 - |
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