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CAN33_4340-T1, CAN33_4340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4340-T1
Unique NameCAN33_4340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:379233..380661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4340-T1 ID=CAN33_4340-T1|Name=CAN33_4340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1429bp|location=Sequence derived from alignment at NKJJ01000019.1:379233..380661- (Aspergillus niger FDAARGOS_311)
ATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCG
CGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAA
CAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGAT
CACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGC
CATCATCAAAGCTCACCCGGAGGTATGCACATACTCCCCCGTGGCCTTTT
CTACCAAAGATTCATTTACTGACATGACCTCCTTCGTGCTTCCTTCAGGT
TACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCG
TCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATG
TTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTCGAA
CCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCTTCC
GGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGATC
GGTTTGCCCTATAGCGCTGCATTCCGGGTACGTTGGACTATGACATCCAG
AAGCATATAAAACCAAGTATACAAGAAGCTAACTTTTCCCGCTCCATAGC
CCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATACC
GACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAAA
GGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCATGT
TCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCACT
CAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCCA
ACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCACC
CCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCGAC
CACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCCA
CCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCCCC
TCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACTTC
CCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGCGA
ATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTGGA
CATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGCG
CAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTGGTAGCGGACGCGCAGG
TGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATG
GGTGGAAGGAGAGTGAGATTCAGAATTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:379233..380661-

>CAN33_4340-T1 ID=CAN33_4340-T1|Name=CAN33_4340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4968bp|location=Sequence derived from alignment at NKJJ01000019.1:379233..380661- (Aspergillus niger FDAARGOS_311)
GTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGAT
GGGTGGAAGGAGAGTGAGATTCAGAATTGACCCTACCATCTCACCCACCA
CAAGTCCCTCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGTCG
AAGCCTTCCTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTC
CAGATCTTCTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCCTT
CACCTCCATTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGACTACG
CTTTGACCAAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCCTT
CTGAGCTCCTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTCAT
CGCAGAGCACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTATCC
AAGAGCAGAAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCC
CCACCGGAAACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCTACAA
CGTGGGCCTGCATAACGAACACCACGACTTCCCCGCTATCCCCTGGACAA
GACTGCACGAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCCCC
TGCCACCACAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACAAGAA
CGTCGGCATGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTTACCAAG
CTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTC
CCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACT
GGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTCGAACCAGAAC
CTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGC
TATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGC
CCTATAGCGCTGCATTCCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCG
GATGCTTCACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCC
GCAAACCACCTCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAG
AAGCCTCCGCGGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCG
CATCGCTCCAGGCGACAAGCCATCATCAAAGCTCACCCGGAGGTGAAAGC
ATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAA
GGAGAGTGAGATTCAGAATTGACCCTACCATCTCACCCACCACAAGTCCC
TCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTC
CTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTT
CTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCA
TTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGACTACGCTTTGACC
AAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTC
CTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGC
ACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAG
AAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGA
AACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCC
TGCATAACGAACACCACGACTTCCCCGCTATCCCCTGGACAAGACTGCAC
GAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCA
CAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACAAGAACGTCGGCA
TGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTTACCAAGCTCTGCGG
ACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGA
TCCTCTGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTT
CTCGCGACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCT
CGCCATCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCA
ACCGTCTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGC
GCTGCATTCCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTC
ACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCA
CCTCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCC
GCGGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTC
CAGGCGACAAGCCATCATCAAAGCTCACCCGGAGGTGAAAGCATCTCGGC
TTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGAGTG
AGATTCAGAATTGACCCTACCATCTCACCCACCACAAGTCCCTCGGTGTC
GCAGGCCTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGA
CTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACG
CCGTCCGCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTC
CTGAACCTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTG
CGGCGGCTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAG
CCGGCTCTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTC
TTCTCCCGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAA
CCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACT
CCTACTACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAAC
GAACACCACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCA
CCGCATCGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGG
TGTGGGTGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGT
CGGGTTAAGCGTGCGCAGGGCGGTCGTTACCAAGCTCTGCGGACCAGAGC
CCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGC
GCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGCGAC
TGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCATCC
ACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGTCTC
TTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGCATT
CCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATC
TCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGAC
AAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGA
TGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGAC
AAGCCATCATCAAAGCTCACCCGGAGGTGAAAGCATCTCGGCTTCGTCGG
CTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGAGTGAGATTCAG
AATTGACCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCT
AGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTC
TAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGC
CCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCT
GATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCT
CCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCT
CTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCG
CGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGA
AGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTAC
GGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCA
CGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCG
CTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTG
ATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAA
GCGTGCGCAGGGCGGTCGTTACCAAGCTCTGCGGACCAGAGCCCCTGACC
AAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCT
GCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGCGACTGCATACG
TGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCATCCACGAGATC
TCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCAT
CTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCGGATGT
CTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCGCGTG
TCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAACAGA
GCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGATCACT
TCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGCCATC
ATCAAAGCTCACCCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0030148sphingolipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0042284sphingolipid delta-4 desaturase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4340CAN33_4340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4340-T1CAN33_4340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4340-T1.cdsCAN33_4340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4340-T1.exon4CAN33_4340-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4340-T1.exon3CAN33_4340-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4340-T1.exon2CAN33_4340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4340-T1.exon1CAN33_4340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR011388
DBxrefInterPro:IPR013866
DBxrefPFAM:PF08557
DBxrefPFAM:PF00487
ProductFatty acid desaturase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:379233..380661 -
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