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CAN33_43435-T1, CAN33_43435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43435-T1
Unique NameCAN33_43435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:744061..745582+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43435-T1 ID=CAN33_43435-T1|Name=CAN33_43435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1522bp|location=Sequence derived from alignment at NKJJ01000022.1:744061..745582+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAAGTATGCCATTCACCA
TCCCCATATCACACAATACTTGAGCATCCGCTAACTTGCACGTTCTCTCT
GTTCAGCGGTACCGGTTATTCCAAGCTTGGTAGGTCTCCTGATAGCTTCC
ACGTGGAGCTCCGCCGGCAAGCTCCAGGCTGACAAGTCTCCAGGTTTCGC
CGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAG
CTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCG
AACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATC
CGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGAAGCTC
TGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTCGCCAT
GGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAATTCCAT
CTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCTCACTG
AGCCGGTAAGACCCCTCGATTCCTTCCAATGGCTCTTCGAGGATGCAATG
CTGATCGGGTGTTGTAAACAAAGCCCTTGAACCCCCCGAGAACCGTGAGA
ACACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATT
GCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGT
GACCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCA
CACACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAG
AGTATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCT
CCGTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCA
AGGAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGC
TACGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAA
CGGCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCG
AGATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTG
CCTAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAG
GGGTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGG
ACTTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGC
ATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGA
CGTGGCAGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAG
GTAGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAG
GCAGAGTACGACGAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTT
GGGAGGCCCTGGCAGTTCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:744061..745582+

>CAN33_43435-T1 ID=CAN33_43435-T1|Name=CAN33_43435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5208bp|location=Sequence derived from alignment at NKJJ01000022.1:744061..745582+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTACCGGTTATTC
CAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCG
CAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGT
AGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGC
AGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCA
TTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCAAC
TACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGGTT
CTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACT
ACTTCCTCCTCACTGAGCCGAACCGTGAGAACACCGCCGAGATCATGTTC
GAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGC
CCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCG
GAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCC
GAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCG
CGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGG
ATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTG
TGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCG
CCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCG
ATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAG
ATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGT
GATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTG
TGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAG
CGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCG
CAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACACA
AGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACG
CCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGG
TCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGT
AAATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTACCGGTTAT
TCCAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCAC
CGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCG
GTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGG
GCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTT
CATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCA
ACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGG
TTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCA
CTACTTCCTCCTCACTGAGCCGAACCGTGAGAACACCGCCGAGATCATGT
TCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTG
GCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCAC
CGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCCGTCG
CCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGCCGGT
CGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCC
GGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACG
TGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGAC
CGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGAGCAT
CGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCG
AGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGC
GTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGAACAT
TGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGTCTTC
AGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCG
CGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACA
CAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGA
CGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGAGATT
GGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTC
GTAAATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTACCGGTT
ATTCCAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCC
ACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGC
CGGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTG
GGGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTC
TTCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGAT
CAACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGC
GGTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGAC
CACTACTTCCTCCTCACTGAGCCGAACCGTGAGAACACCGCCGAGATCAT
GTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGT
TGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTC
ACCGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCCGT
CGCCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGCCG
GTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAG
CCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTA
CGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGG
ACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGAGC
ATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCC
CGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGACG
GCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGAAC
ATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGTCT
TCAGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGAGG
CGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGTGACA
CACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACA
GACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGAGA
TTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGT
TCGTAAATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTACCGG
TTATTCCAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTC
CCACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCT
GCCGGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGG
TGGGGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACT
TCTTCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCG
ATCAACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGA
GCGGTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGG
ACCACTACTTCCTCCTCACTGAGCCGAACCGTGAGAACACCGCCGAGATC
ATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGT
GTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTC
TCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCC
GTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGC
CGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTG
AGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGC
TACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCC
GGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGA
GCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAAC
CCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGA
CGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGA
ACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGT
CTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGA
GGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGTGA
CACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGA
CAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGA
GATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCA
GTTCGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARP3CAN33_43435Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43435-T1.exon1CAN33_43435-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_43435-T1.exon2CAN33_43435-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43435-T1.exon3CAN33_43435-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43435-T1.exon4CAN33_43435-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43435-T1.cdsCAN33_43435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43435-T1CAN33_43435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004000
DBxrefPFAM:PF00022
Product actin nucleation center
ProductArp2/3 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:744061..745582 +
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