You are here

Home

CAN33_43685-T1, CAN33_43685-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43685-T1
Unique NameCAN33_43685-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:889790..891806-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43685-T1 ID=CAN33_43685-T1|Name=CAN33_43685-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2017bp|location=Sequence derived from alignment at NKJJ01000022.1:889790..891806- (Aspergillus niger FDAARGOS_311)
ATGAGACACATTCCATGCCGATCAGCCTTCCATATCCACGGTGAGCGAAA
CCAGGACGCAACTGAGCACGACCAGGGCTCCGTTCCCGCACACTTGATCC
CCATCCCGACGGCGGTCCCGATGCCCCGCCAAAGGCAACCCGCTCGGTTC
TCGAGCGAAGCTCCCTCCGAATCTTCGACCTCGTCGACGTCCCCGGATCG
CACCGCGGACGAAGATACCGACTTCTTCACAGCCCAGGCAAATGACTCGC
AATCGTCGGTCGGCGTCGCGACCCGTGACGCCCATCCCCACCATGACACC
GACTTGGACCTGCCGCCGATCGGGCGTCTACCCCCGGAGATTCTCATCGC
CATCTTCGCGAAATTGTCCTCGCCCTCCGACATGTTGAGCTGCATGCGCG
TATGCAGGGGATGGGCGGCGAACTGCGTGGGCATCCTCTGGCACCGGCCC
TCGTGCAACAACTGGGACAACATGAAGAGCATTACGGCCTCGGTGGGCAA
ATCAGACAGCTTCTTTCCGTACTCGCAGCTGATCCGGAGACTCAACCTCT
CTGCGTTGACGGACGACGTCAGCGATGGCACTGTCGTGCCCTTTGCCCAG
TGCAACCGCATCGAGCGTCTCACGTTGACCAACTGCTCGAAACTCACGGA
TAAGGGTGTATCGGACTTGGTGGAAGGCAATCGGCATCTGCAGGCTTTGG
ATGTCTCTGATCTGCGGCATCTTACGGATCATACCTTGTACACGATAGCT
CGGAACTGTGCGCGGCTACAGGGCCTCAATATTACGGGATGCGTCAATGT
AACGGACGACTCGTTAATTACGGTGTCTCGGAATTGTCGACAAATTAAAA
GGGTAGGCGCTTGTGCCGGTGCATCTGTACCATGTATTTGGGAGACTCGA
CTAACCCATCGCAGTTGAAATTGAATGGAGTAACGCAGGTCACCGACAAG
GCCATCATGTCGTTCGCCCAGAGTTGCCCGGCCATCCTGGAGATTGACCT
GCATGACTGTAAGCTCGTCACCAACCCGTCGGTGACCTCGCTCATGACGA
CGCTCCAAAACCTGCGCGAGCTGCGACTAGCCCATTGTACAGAAATTGAC
GACACGGCTTTCCTCGAGCTGCCCCGGCAGCTGTCGATGGACAGTCTTCG
CATCCTCGACCTGACGTCATGCGAGAGCGTCCGGGACGATGCCGTTGAGC
GCATCGTGGCTGCAGCCCCGCGTCTACGGAATTTGGTGCTGGCCAAGTGT
CGGTTCATCACCGATCGTGCGGTCTGGGCCATTTGCCGCCTCGGCAAGAA
TCTACATTATGTCCACCTGGGCCACTGCTCCAACATCACCGATGCCGCGG
TGATCCAGCTGGTCAAATCCTGCAACCGCATCCGGTATATCGATCTGGCC
TGCTGCATTCGTTTGACGGACACGAGCGTGCAGCAGCTGGCCACGTTGCC
CAAGCTGCGGCGAATTGGCTTGGTCAAGTGCCAGAATATCACGGACAATA
GCATTCGCGCCTTGGCAGGATCCAAGGCGGCCCACCATTCGGGGGAGTCA
GTAGCTTGGAGCGGGTGCATCTGAGTTACTGCGTTCGCCTGACGATTGAG
GTACGTTTTGGAGGGATAATCTACGTGGCAATCCATAGTATGCTGACTAG
CGCACAGGGAATCCATGCTTTATTGAATAGTTGTCCGCGACTGACACATC
TGAGTCTGACGGGCGTCCAGGCCTTCCTGCGGGAAGAGCTGACGGTCTTC
TGCCGCGAGGCACCTTCCGAGTTCACGCATCAACAACGGGAGGTGTTCTG
CGTGTTCAGCGGCGAGGGCGTCAACCGTCTGCGCGATTTCCTGAACCGCA
TCATTCCGCCTCCTCCGCCGACGCGGGACATGACCGAAGCCACGATGTAT
GACGATGATGAAGAGCTAGAGGACGAGGAAAACCAGGTGACGGGCTTGAT
GCATGCGACCGCCGCGACGGCCATTCACGACGACGACTACATTGACATTG
GACATACCCATGGTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:889790..891806-

>CAN33_43685-T1 ID=CAN33_43685-T1|Name=CAN33_43685-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5391bp|location=Sequence derived from alignment at NKJJ01000022.1:889790..891806- (Aspergillus niger FDAARGOS_311)
TCTGACGGGCGTCCAGGCCTTCCTGCGGGAAGAGCTGACGGTCTTCTGCC
GCGAGGCACCTTCCGAGTTCACGCATCAACAACGGGAGGTGTTCTGCGTG
TTCAGCGGCGAGGGCGTCAACCGTCTGCGCGATTTCCTGAACCGCATCAT
TCCGCCTCCTCCGCCGACGCGGGACATGACCGAAGCCACGATGTATGACG
ATGATGAAGAGCTAGAGGACGAGGAAAACCAGGTGACGGGCTTGATGCAT
GCGACCGCCGCGACGGCCATTCACGACGACGACTACATTGACATTGGACA
TACCCATGGTTGATTGAAATTGAATGGAGTAACGCAGGTCACCGACAAGG
CCATCATGTCGTTCGCCCAGAGTTGCCCGGCCATCCTGGAGATTGACCTG
CATGACTGTAAGCTCGTCACCAACCCGTCGGTGACCTCGCTCATGACGAC
GCTCCAAAACCTGCGCGAGCTGCGACTAGCCCATTGTACAGAAATTGACG
ACACGGCTTTCCTCGAGCTGCCCCGGCAGCTGTCGATGGACAGTCTTCGC
ATCCTCGACCTGACGTCATGCGAGAGCGTCCGGGACGATGCCGTTGAGCG
CATCGTGGCTGCAGCCCCGCGTCTACGGAATTTGGTGCTGGCCAAGTGTC
GGTTCATCACCGATCGTGCGGTCTGGGCCATTTGCCGCCTCGGCAAGAAT
CTACATTATGTCCACCTGGGCCACTGCTCCAACATCACCGATGCCGCGGT
GATCCAGCTGGTCAAATCCTGCAACCGCATCCGGTATATCGATCTGGCCT
GCTGCATTCGTTTGACGGACACGAGCGTGCAGCAGCTGGCCACGTTGCCC
AAGCTGCGGCGAATTGGCTTGGTCAAGTGCCAGAATATCACGGACAATAG
CATTCGCGCCTTGGCAGGATCCAAGGCGGCCCACCATTCGGGGGAATGAG
ACACATTCCATGCCGATCAGCCTTCCATATCCACGGTGAGCGAAACCAGG
ACGCAACTGAGCACGACCAGGGCTCCGTTCCCGCACACTTGATCCCCATC
CCGACGGCGGTCCCGATGCCCCGCCAAAGGCAACCCGCTCGGTTCTCGAG
CGAAGCTCCCTCCGAATCTTCGACCTCGTCGACGTCCCCGGATCGCACCG
CGGACGAAGATACCGACTTCTTCACAGCCCAGGCAAATGACTCGCAATCG
TCGGTCGGCGTCGCGACCCGTGACGCCCATCCCCACCATGACACCGACTT
GGACCTGCCGCCGATCGGGCGTCTACCCCCGGAGATTCTCATCGCCATCT
TCGCGAAATTGTCCTCGCCCTCCGACATGTTGAGCTGCATGCGCGTATGC
AGGGGATGGGCGGCGAACTGCGTGGGCATCCTCTGGCACCGGCCCTCGTG
CAACAACTGGGACAACATGAAGAGCATTACGGCCTCGGTGGGCAAATCAG
ACAGCTTCTTTCCGTACTCGCAGCTGATCCGGAGACTCAACCTCTCTGCG
TTGACGGACGACGTCAGCGATGGCACTGTCGTGCCCTTTGCCCAGTGCAA
CCGCATCGAGCGTCTCACGTTGACCAACTGCTCGAAACTCACGGATAAGG
GTGTATCGGACTTGGTGGAAGGCAATCGGCATCTGCAGGCTTTGGATGTC
TCTGATCTGCGGCATCTTACGGATCATACCTTGTACACGATAGCTCGGAA
CTGTGCGCGGCTACAGGGCCTCAATATTACGGGATGCGTCAATGTAACGG
ACGACTCGTTAATTACGGTGTCTCGGAATTGTCGACAAATTAAAAGGTCT
GACGGGCGTCCAGGCCTTCCTGCGGGAAGAGCTGACGGTCTTCTGCCGCG
AGGCACCTTCCGAGTTCACGCATCAACAACGGGAGGTGTTCTGCGTGTTC
AGCGGCGAGGGCGTCAACCGTCTGCGCGATTTCCTGAACCGCATCATTCC
GCCTCCTCCGCCGACGCGGGACATGACCGAAGCCACGATGTATGACGATG
ATGAAGAGCTAGAGGACGAGGAAAACCAGGTGACGGGCTTGATGCATGCG
ACCGCCGCGACGGCCATTCACGACGACGACTACATTGACATTGGACATAC
CCATGGTTGATTGAAATTGAATGGAGTAACGCAGGTCACCGACAAGGCCA
TCATGTCGTTCGCCCAGAGTTGCCCGGCCATCCTGGAGATTGACCTGCAT
GACTGTAAGCTCGTCACCAACCCGTCGGTGACCTCGCTCATGACGACGCT
CCAAAACCTGCGCGAGCTGCGACTAGCCCATTGTACAGAAATTGACGACA
CGGCTTTCCTCGAGCTGCCCCGGCAGCTGTCGATGGACAGTCTTCGCATC
CTCGACCTGACGTCATGCGAGAGCGTCCGGGACGATGCCGTTGAGCGCAT
CGTGGCTGCAGCCCCGCGTCTACGGAATTTGGTGCTGGCCAAGTGTCGGT
TCATCACCGATCGTGCGGTCTGGGCCATTTGCCGCCTCGGCAAGAATCTA
CATTATGTCCACCTGGGCCACTGCTCCAACATCACCGATGCCGCGGTGAT
CCAGCTGGTCAAATCCTGCAACCGCATCCGGTATATCGATCTGGCCTGCT
GCATTCGTTTGACGGACACGAGCGTGCAGCAGCTGGCCACGTTGCCCAAG
CTGCGGCGAATTGGCTTGGTCAAGTGCCAGAATATCACGGACAATAGCAT
TCGCGCCTTGGCAGGATCCAAGGCGGCCCACCATTCGGGGGAATGAGACA
CATTCCATGCCGATCAGCCTTCCATATCCACGGTGAGCGAAACCAGGACG
CAACTGAGCACGACCAGGGCTCCGTTCCCGCACACTTGATCCCCATCCCG
ACGGCGGTCCCGATGCCCCGCCAAAGGCAACCCGCTCGGTTCTCGAGCGA
AGCTCCCTCCGAATCTTCGACCTCGTCGACGTCCCCGGATCGCACCGCGG
ACGAAGATACCGACTTCTTCACAGCCCAGGCAAATGACTCGCAATCGTCG
GTCGGCGTCGCGACCCGTGACGCCCATCCCCACCATGACACCGACTTGGA
CCTGCCGCCGATCGGGCGTCTACCCCCGGAGATTCTCATCGCCATCTTCG
CGAAATTGTCCTCGCCCTCCGACATGTTGAGCTGCATGCGCGTATGCAGG
GGATGGGCGGCGAACTGCGTGGGCATCCTCTGGCACCGGCCCTCGTGCAA
CAACTGGGACAACATGAAGAGCATTACGGCCTCGGTGGGCAAATCAGACA
GCTTCTTTCCGTACTCGCAGCTGATCCGGAGACTCAACCTCTCTGCGTTG
ACGGACGACGTCAGCGATGGCACTGTCGTGCCCTTTGCCCAGTGCAACCG
CATCGAGCGTCTCACGTTGACCAACTGCTCGAAACTCACGGATAAGGGTG
TATCGGACTTGGTGGAAGGCAATCGGCATCTGCAGGCTTTGGATGTCTCT
GATCTGCGGCATCTTACGGATCATACCTTGTACACGATAGCTCGGAACTG
TGCGCGGCTACAGGGCCTCAATATTACGGGATGCGTCAATGTAACGGACG
ACTCGTTAATTACGGTGTCTCGGAATTGTCGACAAATTAAAAGGTCTGAC
GGGCGTCCAGGCCTTCCTGCGGGAAGAGCTGACGGTCTTCTGCCGCGAGG
CACCTTCCGAGTTCACGCATCAACAACGGGAGGTGTTCTGCGTGTTCAGC
GGCGAGGGCGTCAACCGTCTGCGCGATTTCCTGAACCGCATCATTCCGCC
TCCTCCGCCGACGCGGGACATGACCGAAGCCACGATGTATGACGATGATG
AAGAGCTAGAGGACGAGGAAAACCAGGTGACGGGCTTGATGCATGCGACC
GCCGCGACGGCCATTCACGACGACGACTACATTGACATTGGACATACCCA
TGGTTGATTGAAATTGAATGGAGTAACGCAGGTCACCGACAAGGCCATCA
TGTCGTTCGCCCAGAGTTGCCCGGCCATCCTGGAGATTGACCTGCATGAC
TGTAAGCTCGTCACCAACCCGTCGGTGACCTCGCTCATGACGACGCTCCA
AAACCTGCGCGAGCTGCGACTAGCCCATTGTACAGAAATTGACGACACGG
CTTTCCTCGAGCTGCCCCGGCAGCTGTCGATGGACAGTCTTCGCATCCTC
GACCTGACGTCATGCGAGAGCGTCCGGGACGATGCCGTTGAGCGCATCGT
GGCTGCAGCCCCGCGTCTACGGAATTTGGTGCTGGCCAAGTGTCGGTTCA
TCACCGATCGTGCGGTCTGGGCCATTTGCCGCCTCGGCAAGAATCTACAT
TATGTCCACCTGGGCCACTGCTCCAACATCACCGATGCCGCGGTGATCCA
GCTGGTCAAATCCTGCAACCGCATCCGGTATATCGATCTGGCCTGCTGCA
TTCGTTTGACGGACACGAGCGTGCAGCAGCTGGCCACGTTGCCCAAGCTG
CGGCGAATTGGCTTGGTCAAGTGCCAGAATATCACGGACAATAGCATTCG
CGCCTTGGCAGGATCCAAGGCGGCCCACCATTCGGGGGAATGAGACACAT
TCCATGCCGATCAGCCTTCCATATCCACGGTGAGCGAAACCAGGACGCAA
CTGAGCACGACCAGGGCTCCGTTCCCGCACACTTGATCCCCATCCCGACG
GCGGTCCCGATGCCCCGCCAAAGGCAACCCGCTCGGTTCTCGAGCGAAGC
TCCCTCCGAATCTTCGACCTCGTCGACGTCCCCGGATCGCACCGCGGACG
AAGATACCGACTTCTTCACAGCCCAGGCAAATGACTCGCAATCGTCGGTC
GGCGTCGCGACCCGTGACGCCCATCCCCACCATGACACCGACTTGGACCT
GCCGCCGATCGGGCGTCTACCCCCGGAGATTCTCATCGCCATCTTCGCGA
AATTGTCCTCGCCCTCCGACATGTTGAGCTGCATGCGCGTATGCAGGGGA
TGGGCGGCGAACTGCGTGGGCATCCTCTGGCACCGGCCCTCGTGCAACAA
CTGGGACAACATGAAGAGCATTACGGCCTCGGTGGGCAAATCAGACAGCT
TCTTTCCGTACTCGCAGCTGATCCGGAGACTCAACCTCTCTGCGTTGACG
GACGACGTCAGCGATGGCACTGTCGTGCCCTTTGCCCAGTGCAACCGCAT
CGAGCGTCTCACGTTGACCAACTGCTCGAAACTCACGGATAAGGGTGTAT
CGGACTTGGTGGAAGGCAATCGGCATCTGCAGGCTTTGGATGTCTCTGAT
CTGCGGCATCTTACGGATCATACCTTGTACACGATAGCTCGGAACTGTGC
GCGGCTACAGGGCCTCAATATTACGGGATGCGTCAATGTAACGGACGACT
CGTTAATTACGGTGTCTCGGAATTGTCGACAAATTAAAAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_43685CAN33_43685Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43685-T1CAN33_43685-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43685-T1.cdsCAN33_43685-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43685-T1.exon3CAN33_43685-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43685-T1.exon2CAN33_43685-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43685-T1.exon1CAN33_43685-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09260GOF
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR006553
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:889790..891806 -
Powered by Drupal