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CAN33_43725-T1, CAN33_43725-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43725-T1
Unique NameCAN33_43725-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:917527..919320+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43725-T1 ID=CAN33_43725-T1|Name=CAN33_43725-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1794bp|location=Sequence derived from alignment at NKJJ01000022.1:917527..919320+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCT
CCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAA
CGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGC
GACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCA
TGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGC
TCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTC
AGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACG
CCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAA
ACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCC
GTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAA
GGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGC
AGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTC
ATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAA
AACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTG
GCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCC
AAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTA
TGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACA
TGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGAC
AAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACAC
AGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACT
TGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGA
TTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGT
CGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGG
TCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTT
GTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGA
TGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCA
TTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCT
GAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAG
TCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAAC
TTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCA
ATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGG
ACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGC
TATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACC
GTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTT
TATGGACCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTTG
GTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:917527..919320+

>CAN33_43725-T1 ID=CAN33_43725-T1|Name=CAN33_43725-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1794bp|location=Sequence derived from alignment at NKJJ01000022.1:917527..919320+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCCAACGATCAGCCTCCAGCCAAAAGGCTGAAGAGCTCCAATCT
CCCGCCACAGCTGCGCGACGCAAAGCGCAAGGATATCGACAACTGGGAAA
CGAACCGAATGCTCACATCTGGTGTCGCCCAGAGACGCGATTTCGATGGC
GACTTCATGCCCGAAGATGAAGAAGGCACCCGTGTTCATTTGCTGGTCCA
TGACCTCCGTCCGCCTTTCCTCGATGGCCGCACGATCTTCACCAAGCAGC
TCGAGCCCATCTCAGCTGTCCGAGACCCGCAGAGTGATATGGCAGTTTTC
AGTCGGAAAGGAAGCAAAGTGGTTCGCGAACGACGTCAGCAGCGGGAACG
CCAGAAGCAAGCGCAGGAGGCGACAACGATGGCAGGAACGGCGCTGGGAA
ACCTCATGGGTGTAAAGGAGGATGAGGGTGACAGTGCGGTCGCTATGCCC
GTGGAGGATGCCTATAAGAGCGGAAACAAGTTTGCCCAGCATCTGAAAAA
GGATGAAGGTGGACAAAGTTCGTTCAGCAAGAGCAAGACGCTCCGGGAGC
AGAGGGAATTCCTGCCGGCGTTTGCGGTCCGAGAGGATTTGTTGCGCGTC
ATTCGAGATAACCAGGTTGTGGTTGTGGTTGGTGAGACGGGGTCTGGAAA
AACAACACAGCTGACGCAGTTCCTGCACGAGGACGGTTATTCGAAGTTTG
GCATGATCGGGTGCACACAACCTCGTCGAGTGGCAGCTATGAGTGTTGCC
AAGCGTGTCAGTGAGGAAATGGAGGTTGATCTTGGTGATGAAGTTGGCTA
TGCTATTCGTTTCGAAGATTGCACAGGCCCGAAGACGGTCATCAAGTACA
TGACTGATGGTGTTCTTCTACGAGAGTCACTTGTCCAGCAGGACCTTGAC
AAGTATTCTTGTATCATCATGGATGAAGCGCATGAGAGAGCGCTGAACAC
AGACGTGCTCATGGGTCTTCTCAAGAAGGTCCTAGCTCGACGCAGGGACT
TGAAGCTTATCGTCACATCGGCCACCATGAACGCAGAGCGCTTCTCCAGA
TTCTACGGTGGCGCACCGGAGTTTATCATCCCCGGAAGAACGTTTCCTGT
CGATGTTCACTTCTCGCGCACACCATGCGAGGACTATGTTGACAGCGCGG
TCAAGCAGGTCTTGGCCATCCACGTGTCGCAAGGTCCCGGTGATATTCTT
GTGTTTATGACAGGTCAAGAAGATATTGAAGCGACATGCGAGCTGGTTGA
TGAGCGGTTAAAGCTGCTGAACGACCCGCCAAAATTGAGCATTCTTCCCA
TTTACAGTCAGATGCCTGCCGAGCAACAGGCCAAAATTTTCGAACGGGCT
GAGCCTGGCGTGCGCAAAGTGATTGTTGCCACCAATATTGCTGAAACCAG
TCTGACAGTTGACGGTATCATGTTCGTCGTGGATTCGGGGTACTCCAAAC
TTAAGGTGTACAACCCCAAGATGGGCATGGACACTCTGCAGATCACGCCA
ATATCACAGGCCAATGCCAACCAGCGTTCTGGCCGAGCAGGACGTACGGG
ACCGGGCAAGGCATATCGTCTGTATACCGAAGTGGCGTATAAGAACGAGC
TATACCTGCAAACGATTCCGGAAATCCAGCGGACCAGTCTTTCCAACACC
GTCCTTCTCCTCAAATCCCTTGGCGTCAAAGACCTCCTTGACTTTGATTT
TATGGACCCCCACCCCAGGAGACAATCACCACATCCCTCTTCGAGCTTTG
GTCACTCGGAGCACTCGACAATCTCGGCGACCTCACACCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DHX38CAN33_43725Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43725-T1.exon1CAN33_43725-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43725-T1.cdsCAN33_43725-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43725-T1CAN33_43725-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR042035
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductPre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:917527..919320 +
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