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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:405416..406293- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4380-T1 ID=CAN33_4380-T1|Name=CAN33_4380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=878bp|location=Sequence derived from alignment at NKJJ01000019.1:405416..406293- (Aspergillus niger FDAARGOS_311)
ATGGCCTGTCCGTTGACCGAGAAAAGTTCGAACAGCTCTCTTAAGAGTAT
CAATGGTGAGTGATTATTTCGCTACAACAGTGAAACATACCGGGCCTTCC
TGATCCCTTTATTATGGTCTATCGCTTGCAATAGCTAACCAACATTCTAG
ATATAGCTCGTCATAAAGCCTCCTCTGTGGAGTCTGAGTCTGTACAGTCA
GAGCTACCTGCTAATTTTGGAGAGGTCGTGAAAGGGATATATCGCTCTTC
CTTTCCCTATCCCTGGAATCTTACAGCACTCAAGAAGTTGGGTCTGAAGA
CCATAATGTACGTGTCTCTGCGGAATTGCACACCCATGACACTTAACTAA
CAAGGCCTTAGCACACTGGTTGATGAACCGTACCCTCCAAGCCATGTGAT
GTTCGTCAAGGAGAACGGCATTGCACATCACCGCATTTTGGTTCAGGCAA
ACAAGGACCCTGCTGTTAAGATACCTGACTCTGTCATGTGTCGAATCCTT
GAGCTTCTGCTTGATAAAAGCAACCATCCTATTCTCGTCCATTGCAACAA
GGGAAAGGTAAGCACTTGTTCTTATTTATGGTTAACGCGTAACTAATTGC
TCTTGTAGCATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAG
GCCTGGGATTCATGCGACGTCATCGAAGAATACCTTCGATATGCTTTTCC
GAAACCGAGATTACTTGATGAAAACTACATCGACGGATTTGACCCATCCA
AACTTCATCAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCT
GGGCTCTTCAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAACTCAC
TAACTGCCACGTCCCTCCGTCTCTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:405416..406293- >CAN33_4380-T1 ID=CAN33_4380-T1|Name=CAN33_4380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2712bp|location=Sequence derived from alignment at NKJJ01000019.1:405416..406293- (Aspergillus niger FDAARGOS_311)
CATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAGGCCTGGGA
TTCATGCGACGTCATCGAAGAATACCTTCGATATGCTTTTCCGAAACCGA
GATTACTTGATGAAAACTACATCGACGGATTTGACCCATCCAAACTTCAT
CAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCTGGGCTCTT
CAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAACTCACTAACTGCC
ACGTCCCTCCGTCTCTTTAACACACTGGTTGATGAACCGTACCCTCCAAG
CCATGTGATGTTCGTCAAGGAGAACGGCATTGCACATCACCGCATTTTGG
TTCAGGCAAACAAGGACCCTGCTGTTAAGATACCTGACTCTGTCATGTGT
CGAATCCTTGAGCTTCTGCTTGATAAAAGCAACCATCCTATTCTCGTCCA
TTGCAACAAGGGAAAGATATAGCTCGTCATAAAGCCTCCTCTGTGGAGTC
TGAGTCTGTACAGTCAGAGCTACCTGCTAATTTTGGAGAGGTCGTGAAAG
GGATATATCGCTCTTCCTTTCCCTATCCCTGGAATCTTACAGCACTCAAG
AAGTTGGGTCTGAAGACCATAATATGGCCTGTCCGTTGACCGAGAAAAGT
TCGAACAGCTCTCTTAAGAGTATCAATGCATCGTACTGGATGCGTGGTTG
CCTGTTTTCGAAAACTTCAGGCCTGGGATTCATGCGACGTCATCGAAGAA
TACCTTCGATATGCTTTTCCGAAACCGAGATTACTTGATGAAAACTACAT
CGACGGATTTGACCCATCCAAACTTCATCAACTTGCTCAGTCTTCCGGTG
TCAAGACGTGGCAGCCATCTGGGCTCTTCAAGATGCCATCGGGAGAACAG
GATAGAGATAAGGAACTCACTAACTGCCACGTCCCTCCGTCTCTTTAACA
CACTGGTTGATGAACCGTACCCTCCAAGCCATGTGATGTTCGTCAAGGAG
AACGGCATTGCACATCACCGCATTTTGGTTCAGGCAAACAAGGACCCTGC
TGTTAAGATACCTGACTCTGTCATGTGTCGAATCCTTGAGCTTCTGCTTG
ATAAAAGCAACCATCCTATTCTCGTCCATTGCAACAAGGGAAAGATATAG
CTCGTCATAAAGCCTCCTCTGTGGAGTCTGAGTCTGTACAGTCAGAGCTA
CCTGCTAATTTTGGAGAGGTCGTGAAAGGGATATATCGCTCTTCCTTTCC
CTATCCCTGGAATCTTACAGCACTCAAGAAGTTGGGTCTGAAGACCATAA
TATGGCCTGTCCGTTGACCGAGAAAAGTTCGAACAGCTCTCTTAAGAGTA
TCAATGCATCGTACTGGATGCGTGGTTGCCTGTTTTCGAAAACTTCAGGC
CTGGGATTCATGCGACGTCATCGAAGAATACCTTCGATATGCTTTTCCGA
AACCGAGATTACTTGATGAAAACTACATCGACGGATTTGACCCATCCAAA
CTTCATCAACTTGCTCAGTCTTCCGGTGTCAAGACGTGGCAGCCATCTGG
GCTCTTCAAGATGCCATCGGGAGAACAGGATAGAGATAAGGAACTCACTA
ACTGCCACGTCCCTCCGTCTCTTTAACACACTGGTTGATGAACCGTACCC
TCCAAGCCATGTGATGTTCGTCAAGGAGAACGGCATTGCACATCACCGCA
TTTTGGTTCAGGCAAACAAGGACCCTGCTGTTAAGATACCTGACTCTGTC
ATGTGTCGAATCCTTGAGCTTCTGCTTGATAAAAGCAACCATCCTATTCT
CGTCCATTGCAACAAGGGAAAGATATAGCTCGTCATAAAGCCTCCTCTGT
GGAGTCTGAGTCTGTACAGTCAGAGCTACCTGCTAATTTTGGAGAGGTCG
TGAAAGGGATATATCGCTCTTCCTTTCCCTATCCCTGGAATCTTACAGCA
CTCAAGAAGTTGGGTCTGAAGACCATAATATGGCCTGTCCGTTGACCGAG
AAAAGTTCGAACAGCTCTCTTAAGAGTATCAATGCATCGTACTGGATGCG
TGGTTGCCTGTTTTCGAAAACTTCAGGCCTGGGATTCATGCGACGTCATC
GAAGAATACCTTCGATATGCTTTTCCGAAACCGAGATTACTTGATGAAAA
CTACATCGACGGATTTGACCCATCCAAACTTCATCAACTTGCTCAGTCTT
CCGGTGTCAAGACGTGGCAGCCATCTGGGCTCTTCAAGATGCCATCGGGA
GAACAGGATAGAGATAAGGAACTCACTAACTGCCACGTCCCTCCGTCTCT
TTAACACACTGGTTGATGAACCGTACCCTCCAAGCCATGTGATGTTCGTC
AAGGAGAACGGCATTGCACATCACCGCATTTTGGTTCAGGCAAACAAGGA
CCCTGCTGTTAAGATACCTGACTCTGTCATGTGTCGAATCCTTGAGCTTC
TGCTTGATAAAAGCAACCATCCTATTCTCGTCCATTGCAACAAGGGAAAG
ATATAGCTCGTCATAAAGCCTCCTCTGTGGAGTCTGAGTCTGTACAGTCA
GAGCTACCTGCTAATTTTGGAGAGGTCGTGAAAGGGATATATCGCTCTTC
CTTTCCCTATCCCTGGAATCTTACAGCACTCAAGAAGTTGGGTCTGAAGA
CCATAATATGGCCTGTCCGTTGACCGAGAAAAGTTCGAACAGCTCTCTTA
AGAGTATCAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016311 | dephosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004725 | protein tyrosine phosphatase activity |
| GO:0016791 | phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016130 |
| DBxref | InterPro:IPR029021 |
| DBxref | InterPro:IPR004861 |
| DBxref | InterPro:IPR020428 |
| DBxref | PFAM:PF03162 |
| DBxref | PFAM:PF00782 |
| Product | Tyrosine phosphatase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:405416..406293 - |
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