|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:992149..993712+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_43840-T1 ID=CAN33_43840-T1|Name=CAN33_43840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1564bp|location=Sequence derived from alignment at NKJJ01000022.1:992149..993712+ (Aspergillus niger FDAARGOS_311)
ATGAGTTCTACAAATTTCGCCGCTGCCCAGGAAAGGGTTCTGGAACGTCG
TCGTCTCCGCGAAGCGGAAGCTCGCGCCCGGCTGGCGGAGCAGCAGCGGA
CGTCGCCGCTCAATCATCCAACCCTTCAGAGACTCCCTTATCCTCTGAAT
AAGCTGCCCCAGTCAGGTTTCTCGCTATGGAACGCCATCAGAGGCCGGGA
GGGTATCAGGCCTGCGTACCGCGTCGGTCAGGTCGACGCCGAACTGTTAG
ATGAAGAATTACTGGGACTGTTGAAAGGACAGGTCGGGGACGCATTGAAA
TATTACGGGGTTAGTCTAGGTCCGGATAGGATATTGGGTGATCTATCGTG
GATGAAGCTAACGCCCATCTGTACCAGCCTCAACTACGTGAAGACTGGTC
TCACGAGATTCAATTCGCCCTCCGTGCGATCCTTTTCAAGCTCTCGATAT
GGGACCACGATGCCTCCTATGGCGCGGCGTTACAGAACCTAAAATACATT
GATAGTCGCAGCAAAGGACCTGTGCATTCGGCTCCGACAAAGTGGCAGAA
ATCCCTATATGGTCTGCTTACGGTCGGTGGCCGCTACGCTTGGGGCAAAT
GGGAAAGCTGGCTGATCAACCAAGAAAGCGGATACGAAGAGGTAAGTATT
TAGGTTTATCGGATCCTTGTGCATGATTCTCACAAATGCAGCCATCTCAG
GAAGTACGCATGCTCGCCCGCATGACAGACCTCGTTTCCGCCTCTCATTC
GATCGCCGCGTTTGTCTCCTTCCTTGTATTCTTAGTGAATGGCCGATATC
GGACCCTGGTCGACCGCGTGCTTCGTATGCGCTTGATTCCACCTTCTGCA
CAGGCGAGCCGTGAGGTGTCATTTGAATATCTTAACCGTCAACTTGTGTG
GCACGCGATGACCGAATTTCTCCTCTTCCTTTTGCCGCTCGTGGGTATCA
GTCGGTGGCGTCGATGGCTCTCTAGACTGTGGCGGAAGACACTGTCTACC
CTCAAATCGGGCAGCGAGGACGAAGAACAGACCGGAAAGCAGGGAGAATT
GGCTTTCCTCCCAGAAAGGACTTGCGCTATCTGCTACAAAGACAATAACC
CCACGTCCACAACAGAGGGTGAAGCCATAGCCGCGTCAGCCTCGTCGGGA
GGTATTGTTGGGTCAGCCCAAACGGATATAACTAACCCCTATGAAATTAT
ACCCTGCGGTTGTATATATTGTTTTGTCTGTATTGTACAGAAGCTCGAAG
GCGAGGAAGGAGAAGGCTGGGTCTGTCTACGCTGTGGCGAGATTGTGAAG
AAATGCAAACCCTGGAATGGCGATGTACTGGAAGAAACGCGACCCCAGTC
AAGCTCGGGAAAGATGGTGGGGTTTGCGGTGGATGGCGATGACAGCGGCG
CGGACGAACTGGTGGCGGGGGATAGCACTGGGAAAACAAGCCCATTGCAG
GAGGTGACGTCTGATGAGGCGCTTCACCACTCAAGTCAATGGTCGACCAT
CGAGAAGGATGCACTGGAAGAGGTACAAGATGAGGAATCAGAGACGAACG
GATCAGTACAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:992149..993712+ >CAN33_43840-T1 ID=CAN33_43840-T1|Name=CAN33_43840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4338bp|location=Sequence derived from alignment at NKJJ01000022.1:992149..993712+ (Aspergillus niger FDAARGOS_311)
ATGAGTTCTACAAATTTCGCCGCTGCCCAGGAAAGGGTTCTGGAACGTCG
TCGTCTCCGCGAAGCGGAAGCTCGCGCCCGGCTGGCGGAGCAGCAGCGGA
CGTCGCCGCTCAATCATCCAACCCTTCAGAGACTCCCTTATCCTCTGAAT
AAGCTGCCCCAGTCAGGTTTCTCGCTATGGAACGCCATCAGAGGCCGGGA
GGGTATCAGGCCTGCGTACCGCGTCGGTCAGGTCGACGCCGAACTGTTAG
ATGAAGAATTACTGGGACTGTTGAAAGGACAGGTCGGGGACGCATTGAAA
TATTACGGGCCTCAACTACGTGAAGACTGGTCTCACGAGATTCAATTCGC
CCTCCGTGCGATCCTTTTCAAGCTCTCGATATGGGACCACGATGCCTCCT
ATGGCGCGGCGTTACAGAACCTAAAATACATTGATAGTCGCAGCAAAGGA
CCTGTGCATTCGGCTCCGACAAAGTGGCAGAAATCCCTATATGGTCTGCT
TACGGTCGGTGGCCGCTACGCTTGGGGCAAATGGGAAAGCTGGCTGATCA
ACCAAGAAAGCGGATACGAAGAGCCATCTCAGGAAGTACGCATGCTCGCC
CGCATGACAGACCTCGTTTCCGCCTCTCATTCGATCGCCGCGTTTGTCTC
CTTCCTTGTATTCTTAGTGAATGGCCGATATCGGACCCTGGTCGACCGCG
TGCTTCGTATGCGCTTGATTCCACCTTCTGCACAGGCGAGCCGTGAGGTG
TCATTTGAATATCTTAACCGTCAACTTGTGTGGCACGCGATGACCGAATT
TCTCCTCTTCCTTTTGCCGCTCGTGGGTATCAGTCGGTGGCGTCGATGGC
TCTCTAGACTGTGGCGGAAGACACTGTCTACCCTCAAATCGGGCAGCGAG
GACGAAGAACAGACCGGAAAGCAGGGAGAATTGGCTTTCCTCCCAGAAAG
GACTTGCGCTATCTGCTACAAAGACAATAACCCCACGTCCACAACAGAGG
GTGAAGCCATAGCCGCGTCAGCCTCGTCGGGAGGTATTGTTGGGTCAGCC
CAAACGGATATAACTAACCCCTATGAAATTATACCCTGCGGTTGTATATA
TTGTTTTGTCTGTATTGTACAGAAGCTCGAAGGCGAGGAAGGAGAAGGCT
GGGTCTGTCTACGCTGTGGCGAGATTGTGAAGAAATGCAAACCCTGGAAT
GGCGATGTACTGGAAGAAACGCGACCCCAGTCAAGCTCGGGAAAGATGGT
GGGGTTTGCGGTGGATGGCGATGACAGCGGCGCGGACGAACTGGTGGCGG
GGGATAGCACTGGGAAAACAAGCCCATTGCAGGAGGTGACGTCTGATGAG
GCGCTTCACCACTCAAGTCAATGGTCGACCATCGAGAAGGATGCACTGGA
AGAGGTACAAGATGAGGAATCAGAGACGAACGGATCAGTACAGTAGATGA
GTTCTACAAATTTCGCCGCTGCCCAGGAAAGGGTTCTGGAACGTCGTCGT
CTCCGCGAAGCGGAAGCTCGCGCCCGGCTGGCGGAGCAGCAGCGGACGTC
GCCGCTCAATCATCCAACCCTTCAGAGACTCCCTTATCCTCTGAATAAGC
TGCCCCAGTCAGGTTTCTCGCTATGGAACGCCATCAGAGGCCGGGAGGGT
ATCAGGCCTGCGTACCGCGTCGGTCAGGTCGACGCCGAACTGTTAGATGA
AGAATTACTGGGACTGTTGAAAGGACAGGTCGGGGACGCATTGAAATATT
ACGGGCCTCAACTACGTGAAGACTGGTCTCACGAGATTCAATTCGCCCTC
CGTGCGATCCTTTTCAAGCTCTCGATATGGGACCACGATGCCTCCTATGG
CGCGGCGTTACAGAACCTAAAATACATTGATAGTCGCAGCAAAGGACCTG
TGCATTCGGCTCCGACAAAGTGGCAGAAATCCCTATATGGTCTGCTTACG
GTCGGTGGCCGCTACGCTTGGGGCAAATGGGAAAGCTGGCTGATCAACCA
AGAAAGCGGATACGAAGAGCCATCTCAGGAAGTACGCATGCTCGCCCGCA
TGACAGACCTCGTTTCCGCCTCTCATTCGATCGCCGCGTTTGTCTCCTTC
CTTGTATTCTTAGTGAATGGCCGATATCGGACCCTGGTCGACCGCGTGCT
TCGTATGCGCTTGATTCCACCTTCTGCACAGGCGAGCCGTGAGGTGTCAT
TTGAATATCTTAACCGTCAACTTGTGTGGCACGCGATGACCGAATTTCTC
CTCTTCCTTTTGCCGCTCGTGGGTATCAGTCGGTGGCGTCGATGGCTCTC
TAGACTGTGGCGGAAGACACTGTCTACCCTCAAATCGGGCAGCGAGGACG
AAGAACAGACCGGAAAGCAGGGAGAATTGGCTTTCCTCCCAGAAAGGACT
TGCGCTATCTGCTACAAAGACAATAACCCCACGTCCACAACAGAGGGTGA
AGCCATAGCCGCGTCAGCCTCGTCGGGAGGTATTGTTGGGTCAGCCCAAA
CGGATATAACTAACCCCTATGAAATTATACCCTGCGGTTGTATATATTGT
TTTGTCTGTATTGTACAGAAGCTCGAAGGCGAGGAAGGAGAAGGCTGGGT
CTGTCTACGCTGTGGCGAGATTGTGAAGAAATGCAAACCCTGGAATGGCG
ATGTACTGGAAGAAACGCGACCCCAGTCAAGCTCGGGAAAGATGGTGGGG
TTTGCGGTGGATGGCGATGACAGCGGCGCGGACGAACTGGTGGCGGGGGA
TAGCACTGGGAAAACAAGCCCATTGCAGGAGGTGACGTCTGATGAGGCGC
TTCACCACTCAAGTCAATGGTCGACCATCGAGAAGGATGCACTGGAAGAG
GTACAAGATGAGGAATCAGAGACGAACGGATCAGTACAGTAGATGAGTTC
TACAAATTTCGCCGCTGCCCAGGAAAGGGTTCTGGAACGTCGTCGTCTCC
GCGAAGCGGAAGCTCGCGCCCGGCTGGCGGAGCAGCAGCGGACGTCGCCG
CTCAATCATCCAACCCTTCAGAGACTCCCTTATCCTCTGAATAAGCTGCC
CCAGTCAGGTTTCTCGCTATGGAACGCCATCAGAGGCCGGGAGGGTATCA
GGCCTGCGTACCGCGTCGGTCAGGTCGACGCCGAACTGTTAGATGAAGAA
TTACTGGGACTGTTGAAAGGACAGGTCGGGGACGCATTGAAATATTACGG
GCCTCAACTACGTGAAGACTGGTCTCACGAGATTCAATTCGCCCTCCGTG
CGATCCTTTTCAAGCTCTCGATATGGGACCACGATGCCTCCTATGGCGCG
GCGTTACAGAACCTAAAATACATTGATAGTCGCAGCAAAGGACCTGTGCA
TTCGGCTCCGACAAAGTGGCAGAAATCCCTATATGGTCTGCTTACGGTCG
GTGGCCGCTACGCTTGGGGCAAATGGGAAAGCTGGCTGATCAACCAAGAA
AGCGGATACGAAGAGCCATCTCAGGAAGTACGCATGCTCGCCCGCATGAC
AGACCTCGTTTCCGCCTCTCATTCGATCGCCGCGTTTGTCTCCTTCCTTG
TATTCTTAGTGAATGGCCGATATCGGACCCTGGTCGACCGCGTGCTTCGT
ATGCGCTTGATTCCACCTTCTGCACAGGCGAGCCGTGAGGTGTCATTTGA
ATATCTTAACCGTCAACTTGTGTGGCACGCGATGACCGAATTTCTCCTCT
TCCTTTTGCCGCTCGTGGGTATCAGTCGGTGGCGTCGATGGCTCTCTAGA
CTGTGGCGGAAGACACTGTCTACCCTCAAATCGGGCAGCGAGGACGAAGA
ACAGACCGGAAAGCAGGGAGAATTGGCTTTCCTCCCAGAAAGGACTTGCG
CTATCTGCTACAAAGACAATAACCCCACGTCCACAACAGAGGGTGAAGCC
ATAGCCGCGTCAGCCTCGTCGGGAGGTATTGTTGGGTCAGCCCAAACGGA
TATAACTAACCCCTATGAAATTATACCCTGCGGTTGTATATATTGTTTTG
TCTGTATTGTACAGAAGCTCGAAGGCGAGGAAGGAGAAGGCTGGGTCTGT
CTACGCTGTGGCGAGATTGTGAAGAAATGCAAACCCTGGAATGGCGATGT
ACTGGAAGAAACGCGACCCCAGTCAAGCTCGGGAAAGATGGTGGGGTTTG
CGGTGGATGGCGATGACAGCGGCGCGGACGAACTGGTGGCGGGGGATAGC
ACTGGGAAAACAAGCCCATTGCAGGAGGTGACGTCTGATGAGGCGCTTCA
CCACTCAAGTCAATGGTCGACCATCGAGAAGGATGCACTGGAAGAGGTAC
AAGATGAGGAATCAGAGACGAACGGATCAGTACAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006845 |
| DBxref | PFAM:PF04757 |
| Product | Pex2 / Pex12 amino terminal region family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:992149..993712 + |
|
