You are here

Home

CAN33_43900-T1, CAN33_43900-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43900-T1
Unique NameCAN33_43900-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1026154..1027506+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43900-T1 ID=CAN33_43900-T1|Name=CAN33_43900-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1353bp|location=Sequence derived from alignment at NKJJ01000022.1:1026154..1027506+ (Aspergillus niger FDAARGOS_311)
ATGGCGCGCCAGAAACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGA
ACTGATGCATGTGCCTTCGGAAGATTCACAGTCGCCAGGCAAGAGGATTA
TTGGGAAATCTTCCGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCG
CAGGAGAATGCGCCGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGT
TTTGGGAATCTACGCTTCATTGTATGTCTTCCGTTCGTGGTGTCGAGAAC
TTCCGAAGTCATCAAAATGCTGACTGCGATTTCTTAGTCTGTCCTGGGGC
GTGCTTCAAGAAGCCATCACCACAGTGTCCTATCCTACTCATCCTCCGAC
TGCTGAAGTCCCCGAACCTCCGACAGAGCGCTTCACCTACTCGATTGTCC
TGAACACGATCCAGTCGACCTTTGCCGCCATCACCGGCTTCCTGTACCTG
TTCTTTTCGACTCCGTCCGGCCAGAAGATCCCCTCTCCCTTCCCAACCAA
GAAAATCGTCTTCCCCTTGCTCCTGGTCAGCATCTCTTCGTCTCTCGCAT
CGCCTTTCGGATATGCCAGTCTCGCGCACATCGATTACCTCACCTTCATC
CTCGCCAAATCGTGCAAGCTCCTGCCCGTCATGTTCCTCCACCTGACCAT
TTTCCGCAAGAGATACCCCTTGTACAAGTACGGTGTCGTTCTCCTGGTCA
CACTCGGAGTCGCCACATTCACCCTCCACCACCCCGGTACTAGCAAGAAG
GTCGCCGCATCAGCCGCTAAGGGCCAGTCGGGCTCGAGCACATGGGGAAT
CTTCCTCCTCTCCATCAACCTGCTCCTGGACGGCCTCACGAACACCACCC
AGGACCACGTCTTCAGCTCTCCGCAGCTGTACACGCGCTTCACCGGGCCG
CAAATGATGGTTGCCCAGAATGTCCTCTCGACTGTCCTGACGAGCAGCTA
CCTGTTGATCATGCCCCATCTGTCATCTACCGGCATTCTGCACAACCTCC
TCCCGTTCCCGATTCCCCCATCCACAGAGACGGAGCTGAACTCCGCCATT
GGCTTCCTATCCCGTCACCCGGAAGCCCTGAAGAATGTGCTCGGATTCGC
TGCCTGCGGAGCCATCGGACAGCTGTTTATCTTCTACACGCTGTCGCGCT
TCTCATCCTTGCTTCTGGTCACGGTGACGGTCACGCGCAAGATGCTGACC
ATGCTCCTGAGTGTGTTCTGGTTCGGCCACTCCCTCTCGGCGGGCCAGTG
GTTGGGCGTGGGCCTTGTCTTTGGTGGTATTGGTGCCGAAGCTATTGTTC
AACGGCAGGAGAAGGCCGCCAAAGAGCGAGCGAAGGCTGCTAAGAAGCAG
TAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:1026154..1027506+

>CAN33_43900-T1 ID=CAN33_43900-T1|Name=CAN33_43900-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2574bp|location=Sequence derived from alignment at NKJJ01000022.1:1026154..1027506+ (Aspergillus niger FDAARGOS_311)
ATGGCGCGCCAGAAACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGA
ACTGATGCATGTGCCTTCGGAAGATTCACAGTCGCCAGGCAAGAGGATTA
TTGGGAAATCTTCCGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCG
CAGGAGAATGCGCCGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGT
TTTGGGAATCTACGCTTCATTTCTGTCCTGGGGCGTGCTTCAAGAAGCCA
TCACCACAGTGTCCTATCCTACTCATCCTCCGACTGCTGAAGTCCCCGAA
CCTCCGACAGAGCGCTTCACCTACTCGATTGTCCTGAACACGATCCAGTC
GACCTTTGCCGCCATCACCGGCTTCCTGTACCTGTTCTTTTCGACTCCGT
CCGGCCAGAAGATCCCCTCTCCCTTCCCAACCAAGAAAATCGTCTTCCCC
TTGCTCCTGGTCAGCATCTCTTCGTCTCTCGCATCGCCTTTCGGATATGC
CAGTCTCGCGCACATCGATTACCTCACCTTCATCCTCGCCAAATCGTGCA
AGCTCCTGCCCGTCATGTTCCTCCACCTGACCATTTTCCGCAAGAGATAC
CCCTTGTACAAGTACGGTGTCGTTCTCCTGGTCACACTCGGAGTCGCCAC
ATTCACCCTCCACCACCCCGGTACTAGCAAGAAGGTCGCCGCATCAGCCG
CTAAGGGCCAGTCGGGCTCGAGCACATGGGGAATCTTCCTCCTCTCCATC
AACCTGCTCCTGGACGGCCTCACGAACACCACCCAGGACCACGTCTTCAG
CTCTCCGCAGCTGTACACGCGCTTCACCGGGCCGCAAATGATGGTTGCCC
AGAATGTCCTCTCGACTGTCCTGACGAGCAGCTACCTGTTGATCATGCCC
CATCTGTCATCTACCGGCATTCTGCACAACCTCCTCCCGTTCCCGATTCC
CCCATCCACAGAGACGGAGCTGAACTCCGCCATTGGCTTCCTATCCCGTC
ACCCGGAAGCCCTGAAGAATGTGCTCGGATTCGCTGCCTGCGGAGCCATC
GGACAGCTGTTTATCTTCTACACGCTGTCGCGCTTCTCATCCTTGCTTCT
GGTCACGGTGACGGTCACGCGCAAGATGCTGACCATGCTCCTGAGTGTGT
TCTGGTTCGGCCACTCCCTCTCGGCGGGCCAGTGGTTGGGCGTGGGCCTT
GTCTTTGGTGGTATTGGTGCCGAAGCTATTGTTCAACGGCAGGAGAAGGC
CGCCAAAGAGCGAGCGAAGGCTGCTAAGAAGCAGTAGATGGCGCGCCAGA
AACAAGCTGCGCCTTTGCAACGCGCCACGTCCTCTGAACTGATGCATGTG
CCTTCGGAAGATTCACAGTCGCCAGGCAAGAGGATTATTGGGAAATCTTC
CGTCGCAAATGGAAGTGCGTCTGGAAAGCAAGCGGCGCAGGAGAATGCGC
CGGAGACTCCCGGTTTGATGCAGCTTGCGATCTGTGTTTTGGGAATCTAC
GCTTCATTTCTGTCCTGGGGCGTGCTTCAAGAAGCCATCACCACAGTGTC
CTATCCTACTCATCCTCCGACTGCTGAAGTCCCCGAACCTCCGACAGAGC
GCTTCACCTACTCGATTGTCCTGAACACGATCCAGTCGACCTTTGCCGCC
ATCACCGGCTTCCTGTACCTGTTCTTTTCGACTCCGTCCGGCCAGAAGAT
CCCCTCTCCCTTCCCAACCAAGAAAATCGTCTTCCCCTTGCTCCTGGTCA
GCATCTCTTCGTCTCTCGCATCGCCTTTCGGATATGCCAGTCTCGCGCAC
ATCGATTACCTCACCTTCATCCTCGCCAAATCGTGCAAGCTCCTGCCCGT
CATGTTCCTCCACCTGACCATTTTCCGCAAGAGATACCCCTTGTACAAGT
ACGGTGTCGTTCTCCTGGTCACACTCGGAGTCGCCACATTCACCCTCCAC
CACCCCGGTACTAGCAAGAAGGTCGCCGCATCAGCCGCTAAGGGCCAGTC
GGGCTCGAGCACATGGGGAATCTTCCTCCTCTCCATCAACCTGCTCCTGG
ACGGCCTCACGAACACCACCCAGGACCACGTCTTCAGCTCTCCGCAGCTG
TACACGCGCTTCACCGGGCCGCAAATGATGGTTGCCCAGAATGTCCTCTC
GACTGTCCTGACGAGCAGCTACCTGTTGATCATGCCCCATCTGTCATCTA
CCGGCATTCTGCACAACCTCCTCCCGTTCCCGATTCCCCCATCCACAGAG
ACGGAGCTGAACTCCGCCATTGGCTTCCTATCCCGTCACCCGGAAGCCCT
GAAGAATGTGCTCGGATTCGCTGCCTGCGGAGCCATCGGACAGCTGTTTA
TCTTCTACACGCTGTCGCGCTTCTCATCCTTGCTTCTGGTCACGGTGACG
GTCACGCGCAAGATGCTGACCATGCTCCTGAGTGTGTTCTGGTTCGGCCA
CTCCCTCTCGGCGGGCCAGTGGTTGGGCGTGGGCCTTGTCTTTGGTGGTA
TTGGTGCCGAAGCTATTGTTCAACGGCAGGAGAAGGCCGCCAAAGAGCGA
GCGAAGGCTGCTAAGAAGCAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HUT1CAN33_43900Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43900-T1.exon1CAN33_43900-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_43900-T1.exon2CAN33_43900-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43900-T1.cdsCAN33_43900-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43900-T1CAN33_43900-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264F1U
DBxrefInterPro:IPR013657
DBxrefPFAM:PF08449
DBxrefPFAM:PF00892
ProductUDP-galactose transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1026154..1027506 +
Powered by Drupal