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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1039762..1040386+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_43925-T1 ID=CAN33_43925-T1|Name=CAN33_43925-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=625bp|location=Sequence derived from alignment at NKJJ01000022.1:1039762..1040386+ (Aspergillus niger FDAARGOS_311)
ATGGTGCGCCCACCCCCTTTCCTTCCTCCCCCCTCAATATACACAACAAC
ACCACCACCACCACCAACAATATACTAACAATGGATATTAAATGAATACA
GTCGGACGGAGAAGAGACCCAATCCAACCCCGTTGTCGCCGCCGATGAGG
TCGAGGTTTCGGCCGACGCTGGCGCCGGTGGCCAGATGTCCGTCCTGGAT
GCCCTGAAGGGAGTTCTCCGTATCTCTCTCATCCACGACGGACTTGCCCG
TGGTCTGCGCGAGGCCGCTAAGGCCCTGGACCGTCGTCAGGCTCACATGT
GTGTCCTGAACGAGGGCTGCGAGGAGGAGGCCTACAAGAAGCTTGTTGTG
GCTCTTTGCTCCGAGCACAAGATCCCCTCATCAAGGTCCCCGATGGAAAG
ATGCTTGGCGAGTGGGTTGGTCTTTGTAAGTACCCTTTGGTTCCTTTGAA
GATTTGACCGTGTGGGTGATGTGTTTTGCTAATTGGGGTTTGTGGTATAG
GCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTGC
GTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCCT
TAACTACTTCCAGACTGAGCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1039762..1040386+ >CAN33_43925-T1 ID=CAN33_43925-T1|Name=CAN33_43925-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1314bp|location=Sequence derived from alignment at NKJJ01000022.1:1039762..1040386+ (Aspergillus niger FDAARGOS_311)
ATGTCGGACGGAGAAGAGACCCAATCCAACCCCGTTGTCGCCGCCGATGA
GGTCGAGGTTTCGGCCGACGCTGGCGCCGGTGGCCAGATGTCCGTCCTGG
ATGCCCTGAAGGGAGTTCTCCGTATCTCTCTCATCCACGACGGACTTGCC
CGTGGTCTGCGCGAGGCCGCTAAGGCCCTGGACCGTCGTCAGGCTCACAT
GTGTGTCCTGAACGAGGGCTGCGAGGAGGAGGCCTACAAGAAGCTTGTTG
TGGCTCTTTGCTCCGAGCACAAGATCCCCTCATCAAGGTCCCCGATGGAA
AGATGCTTGGCGAGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGT
CAACTGCTCTTGCGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGC
GCTCTGTCCTCCTTAACTACTTCCAGACTGAGCAGTAAATGTCGGACGGA
GAAGAGACCCAATCCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTC
GGCCGACGCTGGCGCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGG
GAGTTCTCCGTATCTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGC
GAGGCCGCTAAGGCCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAA
CGAGGGCTGCGAGGAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCT
CCGAGCACAAGATCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCG
AGCCAGCTCGACCGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTG
CGTCGTCGTTAAGGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCC
TTAACTACTTCCAGACTGAGCAGTAAATGTCGGACGGAGAAGAGACCCAA
TCCAACCCCGTTGTCGCCGCCGATGAGGTCGAGGTTTCGGCCGACGCTGG
CGCCGGTGGCCAGATGTCCGTCCTGGATGCCCTGAAGGGAGTTCTCCGTA
TCTCTCTCATCCACGACGGACTTGCCCGTGGTCTGCGCGAGGCCGCTAAG
GCCCTGGACCGTCGTCAGGCTCACATGTGTGTCCTGAACGAGGGCTGCGA
GGAGGAGGCCTACAAGAAGCTTGTTGTGGCTCTTTGCTCCGAGCACAAGA
TCCCCTCATCAAGGTCCCCGATGGAAAGATGCTTGGCGAGCCAGCTCGAC
CGTGAGGGTAACGCCCGCAAGGTCGTCAACTGCTCTTGCGTCGTCGTTAA
GGACTGGGGTGAGGAGTCCCAGGAGCGCTCTGTCCTCCTTAACTACTTCC
AGACTGAGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CN0 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR000530 |
| DBxref | PFAM:PF01248 |
| Product | 40S ribosomal protein S12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1039762..1040386 + |
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