You are here

Home

CAN33_44000-T1, CAN33_44000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44000-T1
Unique NameCAN33_44000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1093978..1095625+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44000-T1 ID=CAN33_44000-T1|Name=CAN33_44000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1648bp|location=Sequence derived from alignment at NKJJ01000022.1:1093978..1095625+ (Aspergillus niger FDAARGOS_311)
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCT
CAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAA
GAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGGTGAGACCAC
TTACGAATGCGAAGAATTGCAACCAGACTGAATTCTACAGAACAAGCCTA
CCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCGAGGAATTTA
GCGCTGAAAAGGAGCTCTACAATGTGTATGTTCCCAACACCCAACGTATA
GCACCCGCTGACCGGCATTGGCGTGAAGCTCGCGACCTCTCACCCAGTAA
GTCTTGCCACCTTATGGTTCTGGCTCTCATACTGACCAGTCCCAGCCGAA
TTGAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGAC
AGACGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGG
TCAGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACA
GCGAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAA
TCTAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGTAGGA
GTTACACACGCCGTGAAACTGCGTTTGACTAACTCACAATAGGACTTCCT
TCTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCG
ACAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATG
CCCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAG
CTACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGT
GACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACAC
ATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCC
TGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCG
GGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAAC
GCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTG
TTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCG
GATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGG
TATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAA
GGAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCG
GGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTA
TTTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGA
ATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAG
AGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:1093978..1095625+

>CAN33_44000-T1 ID=CAN33_44000-T1|Name=CAN33_44000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6735bp|location=Sequence derived from alignment at NKJJ01000022.1:1093978..1095625+ (Aspergillus niger FDAARGOS_311)
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAAACAAGCCTAC
CGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCGAGGAATTTAG
CGCTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTG
AGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGA
CGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCA
GAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCG
AACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCT
AATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTT
CTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGA
CAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGC
CCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGC
TACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTG
ACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACA
TATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCT
GACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGG
GTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACG
CTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGT
TCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGG
ATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGT
ATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAG
GAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGG
GAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTAT
TTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAA
TGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGA
GCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATG
TCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCC
AGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAG
AAACCTCAGAAGATAAACCAGACTCGACCCCCACCAAACAAGCCTACCGG
TTTCGAAGAGTACTATGTCGACGCACCCATTACCCCGAGGAATTTAGCGC
TGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGAGG
ACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGA
GATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAG
GATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAAC
AGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAAT
CTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTT
TCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACAG
TCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCCG
GAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTAC
AAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACT
TCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATAT
ACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGAC
CACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTG
AGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTG
TGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCA
CCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATC
TTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATG
CCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAA
CTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAA
TGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTC
GAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATGA
CTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCA
AAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATGTCA
GACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCAGC
TGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAGAAA
CCTCAGAAGATAAACCAGACTCGACCCCCACCAAACAAGCCTACCGGTTT
CGAAGAGTACTATGTCGACGCACCCATTACCCCGAGGAATTTAGCGCTGA
AAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGAGGACG
CTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGAGAT
GTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAGGAT
GTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAACAGA
TCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAATCTT
GCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTTTCC
ATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACAGTCA
CCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCCGGAG
TACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTACAAG
GGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACTTCA
ACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATATACG
GAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGACCAC
TGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTGAGA
ATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTGTGC
GCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCACCC
TCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATCTTG
TCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATGCCT
GATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAACTT
TGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAATGA
AAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTCGAG
GATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATGACTT
GATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCAAAG
CAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATGTCAGAC
TCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCAGCTGC
ATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAGAAACCT
CAGAAGATAAACCAGACTCGACCCCCACCAAACAAGCCTACCGGTTTCGA
AGAGTACTATGTCGACGCACCCATTACCCCGAGGAATTTAGCGCTGAAAA
GGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGAGGACGCTC
TCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGAGATGTT
TTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAGGATGTT
CGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAACAGATCC
TACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAATCTTGCT
GTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTTTCCATA
CTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACAGTCACCA
TTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCCGGAGTAC
AACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTACAAGGGA
GCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACTTCAACT
CGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATATACGGAG
GGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGACCACTGA
GATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTGAGAATC
GCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTGTGCGCA
GTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCACCCTCC
CGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATCTTGTCC
CCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATGCCTGAT
TATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAACTTTGA
ATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAATGAAAG
TAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTCGAGGAT
GCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATGACTTGAT
GCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCAAAGCAG
AGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATGTCAGACTCT
CAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCAGCTGCATC
GAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAGAAACCTCAG
AAGATAAACCAGACTCGACCCCCACCAAACAAGCCTACCGGTTTCGAAGA
GTACTATGTCGACGCACCCATTACCCCGAGGAATTTAGCGCTGAAAAGGA
GCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGAGGACGCTCTCT
TACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGAGATGTTTTC
CTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAGGATGTTCGG
GGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAACAGATCCTAC
AAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAATCTTGCTGTT
GATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTTTCCATACTA
TTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACAGTCACCATTC
GGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCCGGAGTACAAC
GATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTACAAGGGAGCT
GTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACTTCAACTCGT
GCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATATACGGAGGGC
AATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGACCACTGAGAT
AGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTGAGAATCGCC
ATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTGTGCGCAGTG
CGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCACCCTCCCGG
CGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATCTTGTCCCCG
TCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATGCCTGATTAT
GATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAACTTTGAATT
CTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAATGAAAGTAA
TCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTCGAGGATGCG
TATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATGACTTGATGCT
AGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCAAAGCAGAGA
GCGATGGGGAGGATGACTCGTCTGTTACTCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033167ARC complex
Vocabulary: Biological Process
TermDefinition
GO:0031047gene silencing by RNA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44000CAN33_44000Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44000-T1CAN33_44000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44000-T1.exon1CAN33_44000-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44000-T1.exon2CAN33_44000-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44000-T1.exon3CAN33_44000-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44000-T1.exon4CAN33_44000-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_44000-T1.exon5CAN33_44000-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44000-T1.cdsCAN33_44000-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR018606
DBxrefPFAM:PF09692
ProductArgonaute siRNA chaperone (ARC) complex subunit Arb1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1093978..1095625 +
Powered by Drupal