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CAN33_44025-T1, CAN33_44025-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44025-T1
Unique NameCAN33_44025-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1108788..1109790+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44025-T1 ID=CAN33_44025-T1|Name=CAN33_44025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1003bp|location=Sequence derived from alignment at NKJJ01000022.1:1108788..1109790+ (Aspergillus niger FDAARGOS_311)
ATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAA
GGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGGTATGTGCT
ATCTACGCTGGCCTACCCGCTCCCGGGCAATCCCATACCCCTCCCACTCC
CCGTGGTAGTAGCCTCGTGGCATCCAGCATCGCCGCCGCCTCCCCCCTTG
CTTGCTGCCCAGTCCCGTCAAACGTACAGCGCGAGCATTCCTGATAACCC
CACCGTTGAAATTGAATTTGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCCCGCAAACTTGGCTTTTTCTTGGAATCCTCCACTTGCCTCAAATTTCG
TATCTAATTCAAATCCCCCACAGACAAGAACGACGAGTCTCTCAACCGCT
GGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAAT
GATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACG
TCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCA
AGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTC
GTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGT
GGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGGTAA
GTACTCTCATCTCGACAATCGCAGGATGTAAGCCATGTACTCACTCGCTT
ATAGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGA
AGTGTAAGCCACTACCCTACTATATGACACAAGTAGAAAGGAAAAAGATA
TAAAAGTACTAACCCGACGCAGTCAACGCCGAGGAAGCCCCCTCAGGCAT
GATGTACCGTGGCCACTACAACGCCGTGTCCAAGTTCGTCGACGATGACA
ACCACACCCACCTCCAGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGG
TAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1108788..1109790+

>CAN33_44025-T1 ID=CAN33_44025-T1|Name=CAN33_44025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2376bp|location=Sequence derived from alignment at NKJJ01000022.1:1108788..1109790+ (Aspergillus niger FDAARGOS_311)
ATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAA
GGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACG
ACGAGTCTCTCAACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAAT
CCCATTGGCGACCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGC
CCTGGAGGTGCAGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCC
ATGCGCTCGAGACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCC
ACCTTCCACATCAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGG
TCTCAAGTACCTGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGG
ACGAGGAGATGCTGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTC
TACGAGAAGAAGTTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCG
TGGCCACTACAACGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCC
ACCTCCAGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCT
GAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGG
AGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGT
CTCTCAACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATT
GGCGACCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGA
GGTGCAGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGC
TCGAGACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTC
CACATCAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAA
GTACCTGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGG
AGATGCTGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAG
AAGAAGTTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCA
CTACAACGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCC
AGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCTGAGCAC
GAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAA
GAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGTCTCTCA
ACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGAC
CCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCA
GGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGA
CCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATC
AAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCT
GCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGC
TGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGAAG
TTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAA
CGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCG
AGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCTGAGCACGAAGAA
GACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAAGAAGAC
CATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGTCTCTCAACCGCT
GGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAAT
GATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACG
TCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCA
AGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTC
GTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGT
GGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGGGAA
GCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGAAGTTCAAC
GCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGT
GTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGT
CCTTCGACATCGCCAAGGACTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44025CAN33_44025Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44025-T1.exon1CAN33_44025-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44025-T1.exon2CAN33_44025-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44025-T1.exon3CAN33_44025-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44025-T1.exon4CAN33_44025-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44025-T1.cdsCAN33_44025-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44025-T1CAN33_44025-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264KK7
DBxrefInterPro:IPR014756
DBxrefInterPro:IPR000406
DBxrefInterPro:IPR024792
DBxrefPFAM:PF02115
ProductRHO protein GDP dissociation inhibitor family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1108788..1109790 +
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