|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1149705..1151070- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44090-T1 ID=CAN33_44090-T1|Name=CAN33_44090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1366bp|location=Sequence derived from alignment at NKJJ01000022.1:1149705..1151070- (Aspergillus niger FDAARGOS_311)
ATGGCGCACCTGCGCCCAACATCTCCACGCATCCACCCACCCCCCAAAAC
CCGCCTCTACAGCACAACCCGCACCCTCCGCTCCAGCACCACTGCCAGCA
GCACCACTACCGCCAGCAGCAACCCCCTCCGCAACGCCCGGCCCATCCGC
AGCCGCGAGCAGGACCTCGCGCGGAGCAAACGCTCGATGTACATCTCCGC
GACGGGGATGATCGTATGCGCAATCGGGATGTACGGGGTGATCAAAGCGG
ACGTGTTCGGGCTGGAACAAGCAACCCCCACCAGTACCACCGAGGGCATT
GACATCGAAAACGCCACCAGCAGCAACAGCAGTGCGACCAAACTCGACGG
CCCAAGCACAGGCTTCCCGACGAAACCCACCCTAACGCACATCAAAGCCG
CCGACGGCACAACCGACCAAGTGGAGACAGGAACGAGCACGATCCCACAT
TTCCCGGCGGTGATTCATCTGCCGAAGTGGTTGGAGAGTGAGAATCCTCC
TGCGTCTGCGACGGATTTGCCGACGCAGAGTGGTACTGGTACTGGGGAAG
GAGAAGGGGAGGAATATCATCTTCTAGGGTTGGGGATTCGCACTGTCTCA
TTCCTCAATTTCCAGGTGTATGTGGTGGGGTTGTATGTTGCGAAGGAGGA
TTTGGCGGAGCTGCAATCGCGACTTGTGCGCACGGCGGTGCATCCGCCTG
GAAAGGGGACGGAGTCGGTGATTGATAATGAGGTGGGAGCTACGGCGGCG
ACGTCGTTGGTGTCGATGGAGAGGGATAAGTTGAGGGAGTTGTTGTTGGA
TGCGGAGAAGGGGGAGCAGGCGTGGGATATGTTGCTGAGGAAGGATGGGT
TGAGGACGGCGTTCCGGGTCGTGCCGACGAGGAATACGGATTTCTTGCAT
CTGAGGGATGGGTGGGTGAGGGGGATTACGGGTAGGGCGCAGAAGTATAA
TAAGGAGAGTGGGGGAGAGTTTGAAGGGGAGGAGTTTGGACAGGCGATGG
GGGAGTTTAAGGGCCTGTTTGGAGGTGGGCAGAGGAAGAGTGTGCCCAAG
GGACAGGTGTTGGTATTGGCGAGAGGGGCGAAGGGACAGTTGGATGTGTT
GGTACAAGGTGGTGGTAGTGGGAAGGATGGAGTGCCGGACCGGTATCTGG
GACGGGTGAAGGATGAGAGGATCAGTCGGTTGGTGTGGATGAATTATTTG
GCGGGGAAGAATGTCTCCAGTGAGGGGCCAGACAGAGTGTCGTGGATGGG
ATTATGGGGGTGGTGGAGAGGCCAGTTGGGACTGTATAATCCCCTCTTTT
CCTTTGGTTCAAGGATTTATGTAGTGTAGTGTATGTATTATATATGATCT
GATTTCAACCAGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1149705..1151070- >CAN33_44090-T1 ID=CAN33_44090-T1|Name=CAN33_44090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2364bp|location=Sequence derived from alignment at NKJJ01000022.1:1149705..1151070- (Aspergillus niger FDAARGOS_311)
CTGAATGGCGCACCTGCGCCCAACATCTCCACGCATCCACCCACCCCCCA
AAACCCGCCTCTACAGCACAACCCGCACCCTCCGCTCCAGCACCACTGCC
AGCAGCACCACTACCGCCAGCAGCAACCCCCTCCGCAACGCCCGGCCCAT
CCGCAGCCGCGAGCAGGACCTCGCGCGGAGCAAACGCTCGATGTACATCT
CCGCGACGGGGATGATCGTATGCGCAATCGGGATGTACGGGGTGATCAAA
GCGGACGTGTTCGGGCTGGAACAAGCAACCCCCACCAGTACCACCGAGGG
CATTGACATCGAAAACGCCACCAGCAGCAACAGCAGTGCGACCAAACTCG
ACGGCCCAAGCACAGGCTTCCCGACGAAACCCACCCTAACGCACATCAAA
GCCGCCGACGGCACAACCGACCAAGTGGAGACAGGAACGAGCACGATCCC
ACATTTCCCGGCGGTGATTCATCTGCCGAAGTGGTTGGAGAGTGAGAATC
CTCCTGCGTCTGCGACGGATTTGCCGACGCAGAGTGGTACTGGTACTGGG
GAAGGAGAAGGGGAGGAATATCATCTTCTAGGGTTGGGGATTCGCACTGT
CTCATTCCTCAATTTCCAGGTGTATGTGGTGGGGTTGTATGTTGCGAAGG
AGGATTTGGCGGAGCTGCAATCGCGACTTGTGCGCACGGCGGTGCATCCG
CCTGGAAAGGGGACGGAGTCGGTGATTGATAATGAGGTGGGAGCTACGGC
GGCGACGTCGTTGGTGTCGATGGAGAGGGATAAGTTGAGGGAGTTGTTGT
TGGATGCGGAGAAGGGGGAGCAGGCGTGGGATATGTTGCTGAGGAAGGAT
GGGTTGAGGACGGCGTTCCGGGTCGTGCCGACGAGGAATACGGATTTCTT
GCATCTGAGGGATGGGTGGGTGAGGGGGATTACGGGTAGGGCGCAGAAGT
ATAATAAGGAGAGTGGGGGAGAGTTTGAAGGGGAGGAGTTTGGACAGGCG
ATGGGGGAGTTTAAGGGCCTGTTTGGAGGTGGGCAGAGGAAGAGTGTGCC
CAAGGGACAGGTGTTGGTATTGGCGAGAGGGGCGAAGGGACAGTTGGATG
TGTTGGTACAAGGTGGTGGTAGTGGGAAGGATGGAGTGCCGGACCGGTAT
CTGGGACGGGTGAAGGATGAGAGGATCAGTCGCTGAATGGCGCACCTGCG
CCCAACATCTCCACGCATCCACCCACCCCCCAAAACCCGCCTCTACAGCA
CAACCCGCACCCTCCGCTCCAGCACCACTGCCAGCAGCACCACTACCGCC
AGCAGCAACCCCCTCCGCAACGCCCGGCCCATCCGCAGCCGCGAGCAGGA
CCTCGCGCGGAGCAAACGCTCGATGTACATCTCCGCGACGGGGATGATCG
TATGCGCAATCGGGATGTACGGGGTGATCAAAGCGGACGTGTTCGGGCTG
GAACAAGCAACCCCCACCAGTACCACCGAGGGCATTGACATCGAAAACGC
CACCAGCAGCAACAGCAGTGCGACCAAACTCGACGGCCCAAGCACAGGCT
TCCCGACGAAACCCACCCTAACGCACATCAAAGCCGCCGACGGCACAACC
GACCAAGTGGAGACAGGAACGAGCACGATCCCACATTTCCCGGCGGTGAT
TCATCTGCCGAAGTGGTTGGAGAGTGAGAATCCTCCTGCGTCTGCGACGG
ATTTGCCGACGCAGAGTGGTACTGGTACTGGGGAAGGAGAAGGGGAGGAA
TATCATCTTCTAGGGTTGGGGATTCGCACTGTCTCATTCCTCAATTTCCA
GGTGTATGTGGTGGGGTTGTATGTTGCGAAGGAGGATTTGGCGGAGCTGC
AATCGCGACTTGTGCGCACGGCGGTGCATCCGCCTGGAAAGGGGACGGAG
TCGGTGATTGATAATGAGGTGGGAGCTACGGCGGCGACGTCGTTGGTGTC
GATGGAGAGGGATAAGTTGAGGGAGTTGTTGTTGGATGCGGAGAAGGGGG
AGCAGGCGTGGGATATGTTGCTGAGGAAGGATGGGTTGAGGACGGCGTTC
CGGGTCGTGCCGACGAGGAATACGGATTTCTTGCATCTGAGGGATGGGTG
GGTGAGGGGGATTACGGGTAGGGCGCAGAAGTATAATAAGGAGAGTGGGG
GAGAGTTTGAAGGGGAGGAGTTTGGACAGGCGATGGGGGAGTTTAAGGGC
CTGTTTGGAGGTGGGCAGAGGAAGAGTGTGCCCAAGGGACAGGTGTTGGT
ATTGGCGAGAGGGGCGAAGGGACAGTTGGATGTGTTGGTACAAGGTGGTG
GTAGTGGGAAGGATGGAGTGCCGGACCGGTATCTGGGACGGGTGAAGGAT
GAGAGGATCAGTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016872 | intramolecular lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036298 |
| DBxref | InterPro:IPR016087 |
| DBxref | PFAM:PF16035 |
| Product | Chalcone-flavanone isomerase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1149705..1151070 - |
|
