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CAN33_44100-T1, CAN33_44100-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44100-T1
Unique NameCAN33_44100-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1154082..1155523+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44100-T1 ID=CAN33_44100-T1|Name=CAN33_44100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1442bp|location=Sequence derived from alignment at NKJJ01000022.1:1154082..1155523+ (Aspergillus niger FDAARGOS_311)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACAGTAAGACTCCCTCACTATCCATCTCGTGACTTGTGA
AACGCTGATTCGGTCCAGTTTTCCGACAACCTCACCTACTGGCGTAACAA
CTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCG
GCGACAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAAT
GGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCC
GATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCT
ACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAAC
ATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTG
GGGCGATAACTGGGTGCAGAATACGGATGGTTTCGGTATGATTCTTTTTG
TCCGCGCTCTAGTGGAATGGGTTAGGTTCTGACTAGCACTCGTATCCAGA
TACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCG
GAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAG
AATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCA
ATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATG
TACGTGATTGTTTCCCGGCCACCATCGCCATTAGTATTAACCGTAATCCA
GATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCT
GGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCT
CGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAA
TGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACA
ACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTT
GTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGT
CTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGG
TGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAA
TATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1154082..1155523+

>CAN33_44100-T1 ID=CAN33_44100-T1|Name=CAN33_44100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5088bp|location=Sequence derived from alignment at NKJJ01000022.1:1154082..1155523+ (Aspergillus niger FDAARGOS_311)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCC
TACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGA
CAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCA
ATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATG
CCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGT
CAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGC
GTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGC
GATAACTGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAA
CATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTA
TCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGA
GGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAG
TGTTGCTAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAG
ACATGCACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCC
CAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAG
CATCCGTAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTG
GCCCTTCCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACA
AGCAAGATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGT
GGATACTGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATC
CGTGCTACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAAT
GCCACAACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGT
GCATGGGTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCT
CTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAAC
CACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCC
CAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTT
TCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTG
AAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCT
CACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATG
CCGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACC
GGCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGA
CACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGG
TTATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAAC
ATCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCAC
GGCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTT
TCGATACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAA
GGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACAT
CCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGG
GTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTC
AATATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGAC
CTGGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTAC
CTCGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTC
AATGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGA
CAACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGT
TTGTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACG
GTCTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGT
GGTGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTA
AATATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATGCAA
CTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGTTGGCCA
TGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAGCAAACG
GGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAAGAGTGT
GGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTGGATTGC
GACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGCGGGGGA
AGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCCTACCCC
ATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGACAACAT
CACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAATACTT
GGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGCCATTT
GTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTCAAGGA
TCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCGTTTCA
ACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCGATAAC
TGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAACATCCA
GCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTATCAAGC
CCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGAGGCAAC
GGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAGTGTTGC
TAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAGACATGC
ACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGT
TCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCG
TAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTT
CCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAG
ATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATAC
TGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATCCGTGCT
ACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACA
ACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGG
GTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCC
TGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAACCACAAT
GTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCCCAATAT
TATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCG
AAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTGAAGGAC
GTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCTCACCTA
CTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCT
TCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACCGGCGGC
ATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCA
GCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTG
TTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATG
AACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGT
AGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTTTCGATA
CCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGA
GATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAA
TGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAAT
ATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATATC
ATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTGGGT
CGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTG
GCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAATGTA
CAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAACGG
TTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTTGTCA
ATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTCTCC
TGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGTGTT
GTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAATATA
CAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44100CAN33_44100Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44100-T1.exon1CAN33_44100-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44100-T1.exon2CAN33_44100-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44100-T1.exon3CAN33_44100-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44100-T1.exon4CAN33_44100-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44100-T1.cdsCAN33_44100-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44100-T1CAN33_44100-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
ProductGlycosyl hydrolases family 28 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1154082..1155523 +
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