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CAN33_44170-T1, CAN33_44170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44170-T1
Unique NameCAN33_44170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1196334..1198006-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44170-T1 ID=CAN33_44170-T1|Name=CAN33_44170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1673bp|location=Sequence derived from alignment at NKJJ01000022.1:1196334..1198006- (Aspergillus niger FDAARGOS_311)
ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCACAAGCC
GCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGGTGA
GCCTCCACCCTTTAACCCAATCAAACCCCGGCGGAACTATTTCTTCTAAC
TCCTTCTCCCTCGTATAGCTGCTGCGATGCCTGTCCCATGCCTCAGCACG
CCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATGCAGCCTCCCAAT
GACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCCGA
CGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCC
TCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCCTG
GACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATGCG
CATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACG
GTGCCGCCCCGGAAGCAACCCCGGCTCCGGACGGTACAAGGTACGCATCG
AGGGACGTCTTCTGGACGACGACACCGACCCGACCGCCCCGGAGGATAGT
GACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGA
TGGACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCACCA
AGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTCGATAAG
TCCTCCACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTGGACCAAACC
GCAATTACCCCTAACACTGTCACTCTGCCGCCCACAGCAGACTTCGACTC
GATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTCAGTC
TCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCA
GAAGTACTAGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCGGAAT
CTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAGCGAC
TCGTCCGCTGTGACCATCGTCTACGATCGGTACCTCCCCTCCCCATCCCC
ATCCCCATTCCCGATATAATCCAAGACTAACCCGACCCAACCGCGCAGAT
CTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGGCC
CTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTC
GACGAAGACTACCACAAGGACCCGACCCCTACCGTCTACGACATCCAAGT
CGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACC
CGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTC
GCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTA
CACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATT
CCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGT
GGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGT
TTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGC
CGGAGGCGGCGATGGGGAGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1196334..1198006-

>CAN33_44170-T1 ID=CAN33_44170-T1|Name=CAN33_44170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6810bp|location=Sequence derived from alignment at NKJJ01000022.1:1196334..1198006- (Aspergillus niger FDAARGOS_311)
ATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGG
CCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCG
TCGACGAAGACTACCACAAGGACCCGACCCCTACCGTCTACGACATCCAA
GTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAA
CCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGG
TCGCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTC
TACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAA
TTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTG
GTGGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGC
GTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAA
GCCGGAGGCGGCGATGGGGAGGTGATTCACCCGCGCGTCACAGGAGAACC
TGAACGTGACATTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAG
CTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAG
CGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAG
AAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGTGA
CGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATG
GACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCACCAAG
CAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTCGATAAGTC
CTCCACCGCCAGCCCGGAAGAACACGCCGTTCCACCTCAATACATCCCTC
CCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGC
AAACCCACCGACAAGAACATCCCCGACGGCATTGAGGAAGTAATTATCGG
CGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTCG
ATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAG
ACTGTCAAGAAGTACCGCACGATGCGCATTTGGATCTCGAACACTGTCGA
AAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCGGAAGCAACCCCGG
CTCCGGACGGTACAAGATGAATGCCCAGATCCCACCCAACTACGGCCGTG
GGTTCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTC
CTCCAGGTCCTGATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCC
CGAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCT
ACACCATCCGCGTCGACGAAGACTACCACAAGGACCCGACCCCTACCGTC
TACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGC
CCTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGC
TAGACGACCAGGTCGCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCC
CGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCG
CCGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGG
CGACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGT
GGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTA
TATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGATTCACCCGCGCGT
CACAGGAGAACCTGAACGTGACATTCAGTCTCGTGCGCGACGAGACACCA
GAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGA
AGAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCA
TGGGCCTTCAAGAAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATCGT
CTACGATCGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGA
TGGAGCAAGATGGACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAAC
AAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGA
CTTCGATAAGTCCTCCACCGCCAGCCCGGAAGAACACGCCGTTCCACCTC
AATACATCCCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTG
CGTCGCAGCCGCAAACCCACCGACAAGAACATCCCCGACGGCATTGAGGA
AGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGG
AGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGAC
TCCATCAGCAAGACTGTCAAGAAGTACCGCACGATGCGCATTTGGATCTC
GAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCGG
AAGCAACCCCGGCTCCGGACGGTACAAGATGAATGCCCAGATCCCACCCA
ACTACGGCCGTGGGTTCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGC
CTCGTCGCGGTCCTCCAGGTCCTGATCTTCGGCCGCGACCAAATGTTCTT
CCCTCAAATCCCCGAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCA
TCCACCTCCCCTACACCATCCGCGTCGACGAAGACTACCACAAGGACCCG
ACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTC
CAAGATGCTCGCCCTCACCCAGAACCCGCAATACACGGCCTCCATGCGCC
AGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTGCAAGCCCTGACG
CACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGC
TACGTTCGTCCGCCGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTA
TTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCTGAG
TTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGA
AGCGGTGCGGTATATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGAT
TCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTCAGTCTCGTGCGC
GACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACT
AGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACT
ACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAGCGACTCGTCCGC
TGTGACCATCGTCTACGATCGTGACGACGAAGCTACCGAGCAGACGGACA
ACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCCACTACCAAA
AAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATC
CATTACCGTCGACTTCGATAAGTCCTCCACCGCCAGCCCGGAAGAACACG
CCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATGCAGCCTCCCAAT
GACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCCGA
CGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCC
TCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCCTG
GACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATGCG
CATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACG
GTGCCGCCCCGGAAGCAACCCCGGCTCCGGACGGTACAAGATGAATGCCC
AGATCCCACCCAACTACGGCCGTGGGTTCCCCCACAAGCCGCCCAACGCT
CCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGATCTTCGGCCGCGA
CCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGGCCCTCACACCAGCC
CCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTAC
CACAAGGACCCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGA
CCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACCCGCAATACACGG
CCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTG
CAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAG
CAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATTCCCAGCGCAGAG
ACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCT
AGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTAC
TGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGCCGGAGGCGGCGA
TGGGGAGGTGATTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTC
AGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCT
AGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCG
GAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAG
CGACTCGTCCGCTGTGACCATCGTCTACGATCGTGACGACGAAGCTACCG
AGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAAT
GCCACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCA
CTTCTTCAAATCCATTACCGTCGACTTCGATAAGTCCTCCACCGCCAGCC
CGGAAGAACACGCCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATG
CAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAA
GAACATCCCCGACGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGC
AGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTC
CGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTA
CCGCACGATGCGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGC
AGACTGCCAACGGTGCCGCCCCGGAAGCAACCCCGGCTCCGGACGGTACA
AGATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCACAAG
CCGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGAT
CTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCCGAAAGCATCGGCC
CTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTC
GACGAAGACTACCACAAGGACCCGACCCCTACCGTCTACGACATCCAAGT
CGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACC
CGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTC
GCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTA
CACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATT
CCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGT
GGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGT
TTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGC
CGGAGGCGGCGATGGGGAGGTGATTCACCCGCGCGTCACAGGAGAACCTG
AACGTGACATTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCT
AAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAGCG
GCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAA
GATGAAGAGAAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGTGACG
ACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGA
CCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCA
GCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTCGATAAGTCCT
CCACCGCCAGCCCGGAAGAACACGCCGTTCCACCTCAATACATCCCTCCC
CAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAA
ACCCACCGACAAGAACATCCCCGACGGCATTGAGGAAGTAATTATCGGCG
AAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTCGAT
GCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGAC
TGTCAAGAAGTACCGCACGATGCGCATTTGGATCTCGAACACTGTCGAAA
ACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCGGAAGCAACCCCGGCT
CCGGACGGTACAAGATGAATGCCCAGATCCCACCCAACTACGGCCGTGGG
TTCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCT
CCAGGTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44170CAN33_44170Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44170-T1CAN33_44170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44170-T1.cdsCAN33_44170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44170-T1.exon5CAN33_44170-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_44170-T1.exon4CAN33_44170-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_44170-T1.exon3CAN33_44170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44170-T1.exon2CAN33_44170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44170-T1.exon1CAN33_44170-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262IY3
DBxrefInterPro:IPR003121
DBxrefInterPro:IPR036885
DBxrefInterPro:IPR019835
DBxrefPFAM:PF02201
ProductSWIB/MDM2 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1196334..1198006 -
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