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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1200064..1201525+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44180-T1 ID=CAN33_44180-T1|Name=CAN33_44180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1462bp|location=Sequence derived from alignment at NKJJ01000022.1:1200064..1201525+ (Aspergillus niger FDAARGOS_311)
ATGGTAAGTATATCCAAAATGTTTCATCGTCTTCCAAATAGATGCTAATA
TACCTATCAGAAAATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGG
CTCCGGGAACCGCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAG
CATCCATTCGAACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAA
GCTAGAGCGCCTGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCC
ACGTGGACGGTGTGTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGG
TTCGCCAGTGGTAGTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCAC
TCAGGGAGAGGTGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTG
TCTGCTGGACCCCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACC
ATCAAGCTTTTCGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGC
AACCTACCTGGGCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACC
TGCCATACTTCGCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCC
CGTCCTTCCTCCACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGA
TACCATCACCTCCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTT
CGACCGGTATTGATCGCTCGATTATCATGTACGACCTTCGGACATCGTCC
CCTCTACATAAAATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAA
TCCGATGGAAGCATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCT
ACCTGTTCGATATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGAT
CACGTCGCCGCTGTGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATT
GGTCACTGCCTCTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGG
GCCACTCTCGCGACATCTACCACACCAAGCGTATGCAACGGTATGTATTT
CACTTTCGCTCTCCTTATCCAAGCAATTACAGTGCTGACTTCGTTCTACA
GTGTCTTCTCCGCCAAGTTTACCCCCGATAACAAGTACGTCTTGTCCGGC
TCCGACGATGGCAACATCCGACTTTGGCGCGCAAACGCATCCGACCGCAG
CGGTGTAAAGAGCGCTCGTCAACGGGCCAAGCTCGAGTACGACCAGGCCT
TGATCCAGAGATACTCGCACATGCCGGAAATCCGCCGAATCCGACGCCAG
CGTCACGTGCCGAAGCCGATCAAGAAGGCGCGCGAGATCAAGCGGGAGGA
GCTGATGGCGATCAAGAGACGCGAGGAGAACGTGCGCAAGCACACCAAGA
AGGAGAACCTGCCCAAGAGACAGAGCGAGCGCGAGAAGATGATCCTGGCC
AAGGAGCAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1200064..1201525+ >CAN33_44180-T1 ID=CAN33_44180-T1|Name=CAN33_44180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4980bp|location=Sequence derived from alignment at NKJJ01000022.1:1200064..1201525+ (Aspergillus niger FDAARGOS_311)
ATGAAAATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGG
AACCGCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCAT
TCGAACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAG
CGCCTGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGA
CGAGGTGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCT
GGACCCCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAG
CTTTTCGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTA
CCTGGGCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCAT
ACTTCGCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCT
TCCTCCACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCAT
CACCTCCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCG
GTATTGATCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTA
CATAAAATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGAT
GGAAGCATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGT
TCGATATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTC
GCCGCTGTGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCAC
TGCCTCTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACT
CTCGCGACATCTACCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAG
TTTACCCCCGATAACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACAT
CCGACTTTGGCGCGCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTC
GTCAACGGGCCAAGCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCG
CACATGCCGGAAATCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCC
GATCAAGAAGGCGCGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGA
GACGCGAGGAGAACGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAG
AGACAGAGCGAGCGCGAGAAGATGATCCTGGCCAAGGAGCAATAGATGAA
AATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCG
CTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAA
CGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCT
GTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGACGAGG
TGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACC
CCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTT
CGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGG
GCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTC
GCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTC
CACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCT
CCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATT
GATCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAA
AATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAG
CATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGAT
ATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGC
TGTGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCT
CTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGC
GACATCTACCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGTTTAC
CCCCGATAACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACATCCGAC
TTTGGCGCGCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAA
CGGGCCAAGCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCGCACAT
GCCGGAAATCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCGATCA
AGAAGGCGCGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGC
GAGGAGAACGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACA
GAGCGAGCGCGAGAAGATGATCCTGGCCAAGGAGCAATAGATGAAAATCA
AAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCGCTGTC
GTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAACGGGC
TCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCTGTTTG
CTGCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGACGAGGTGTGG
AACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACCCCCGA
TCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTTCGACC
CGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGGGCCAG
GGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTCGCCGC
CTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTCCACTC
CGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCTCCATC
GCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATTGATCG
CTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAAAATGG
TTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAGCATTC
AACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGATATGCG
CAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGCTGTGA
TGGATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCTCTTAC
GATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGCGACAT
CTACCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGTTTACCCCCG
ATAACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACATCCGACTTTGG
CGCGCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAACGGGC
CAAGCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCGCACATGCCGG
AAATCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCGATCAAGAAG
GCGCGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGCGAGGA
GAACGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACAGAGCG
AGCGCGAGAAGATGATCCTGGCCAAGGAGCAATAGATGAAAATCAAAGCT
CTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCGCTGTCGTTCG
ACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAACGGGCTCGTG
AGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCTGTTTGCTGCG
CCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGACGAGGTGTGGAACAC
CCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACCCCCGATCGGA
AGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTTCGACCCGTAC
AACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGGGCCAGGGCGC
TTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTCGCCGCCTCTT
CTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTCCACTCCGTCC
CAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCTCCATCGCTTT
CAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATTGATCGCTCGA
TTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAAAATGGTTCTG
CGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAGCATTCAACTT
TGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGATATGCGCAAGA
TGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGCTGTGATGGAT
GTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCTCTTACGATCG
AACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGCGACATCTACC
ACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGTTTACCCCCGATAAC
AAGTACGTCTTGTCCGGCTCCGACGATGGCAACATCCGACTTTGGCGCGC
AAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAACGGGCCAAGC
TCGAGTACGACCAGGCCTTGATCCAGAGATACTCGCACATGCCGGAAATC
CGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCGATCAAGAAGGCGCG
CGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGCGAGGAGAACG
TGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACAGAGCGAGCGC
GAGAAGATGATCCTGGCCAAGGAGCAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR007287 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF04158 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1200064..1201525 + |
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