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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1205193..1207178- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44195-T1 ID=CAN33_44195-T1|Name=CAN33_44195-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1986bp|location=Sequence derived from alignment at NKJJ01000022.1:1205193..1207178- (Aspergillus niger FDAARGOS_311)
ATGTCACCGCACAATGGAGCTCCTTCCTCCCAGGCGTCTATAGAAACAGC
GCCTTCATCAGCCCACGGAACACTCCATACCACTACCACCATTTCTGGCT
CACCCCCTTCGGATTCCTCGCGCAGCATCAGCATTGGTTCCTCCCTGGGA
CTTCCTCCCTCCTTACCCGGACGGCCGTCGAGCATTCCCTCGAAGAGGGT
CGAGATCCCCCGGCTCTCTGCAGCTACTACCGAGTTACTGGCGCGGGTTA
CCGGGAATCTCAAAGGACCGCAGCAGAGAAATGATAATGATAAATTTGTT
ACATGGAACCCATCAACAGTCACTCGGACGTTCGAAAGCCAGAATAGCAA
CTCAAAAATGGGAAAAATGAGGGCTTCTTCTACAATTATTGAATTGCCTA
CGGCGCCGTTCGTGTATTCGAACAATGTGGCGCCACCGGCGGTCCCTCAG
GCCGCCTCCCCAGTGCCTCAAGGAAACGCTGGAGACATAGTAAAGCCTAC
AAACCTACCGAATCTCGCTCCCAAACCACCCAGCATAATATCGGTCGACG
CATCACCAGCAAGTTCGGGGTCTCCAGTCCCGGTCAATGTCGACCTAAAA
CCAACAAGTTCAACGCCCGTCAATGCAGTTTCACGGCAGTCGGCGTCTCC
AATTCCAGTCAATATCGCTCCAAAGCCGAGCACAACGCCGGTCGGTGTTA
ATTCAGCACCAACACCATTGACTGCATCCATACCAGCAGAGCCCACAGCT
GCAATCAAAATCGCCCCTAAACCAAATGGGACATTGTCAGATGGTGCAGC
ACCAGCATCAACCTCATTGCCTACACCACAACAGCCACAGACGGCAGCCA
AGCCCAAGAAACCGCAAGCAGCAGCTGGCTCGCGCCAGCGAAAGGGTGCG
GCAAATGGTAACAAGCGCGGCAAGAAGCGCAGACGAAATAACGATAGTGA
CGGGGAAGATATCATAAGGGCCGGAGACTCCAGTAGCGACGAATCAGATG
TGGCACCAACAGCGACGCAAACGAAATCCGGCCGCCTGGTCAACCGGCCT
TCGTTATATGTACCTGCGCCGTCAACTCCTGCGGTAGCCAAGGAGGTAAG
CAACTCGGTGGACGCGTCTGATAATGCAGTCGTCGCACGAAAGCGTAAAC
GTATCCACCGCCGAGGGAAAGATGCGATCATCATTTGCTTGCATTGTCAA
AGGGGCCATAGCCCATTGAGCAATTCGATCGTATTCTGTGACGAGTGCAA
TGCTGCATGGCATCAGTGGTGTCACGACCCTCCTATTGGCGCAGACGTTG
TTGCGGTCAAGGAAAAGGAATGGTTCTGTCGAGAATGCCGACCTGTCCAA
ATTTCTGTCATTCAACCAACGGTCGTGCGGAGCAATCCCAACCTTACATC
TGGGCCATTAGTCCCTAATTATCCTCTATTATCAATCCCTAAAGGCGAGG
TTGGTGCAGCGGAGTTTTCGGCCGATGAGCGACGGGGCTTCCTGTCAAGT
CTTTCGCACGCCACCCTCGTTGAGCTGCTGATGACTATCTCGGACAACAA
CCCGATATTGCCGATGTTTCCTGAGAACATGAGGGACCTTCAGTCTTCAA
AGTTTGCTTTTCGTCTACCGATCTCCGATGCCCCGACTCCGTCGACATCC
GTGTCGGGTAATGTCTCGACAAGCAATGATACAAGGGATTCCGCGTCTGC
ATCTACTGAAGGGAACAAACAAAATGAGGATTCTGCACCCGAAGCTACAT
CTTCATCAACAACTCGAAGGCAGTATGAGGAGATCTCTGATGACGACTCG
GAATATGAATTCCAGGAGCACCGGTTGTATCCACGCGCTGGGAACGGGTT
CCGGCTATCGCTTAATGTGGATGACATGGATATTATGCGCGAAGACCCTG
CTTGTCCTACCTTCAGCTATTCGCTACACGGACCTGCGCAGGTACGCGCT
CAAATGAATGATATCGTTCCTGTGTGGGGAACATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1205193..1207178- >CAN33_44195-T1 ID=CAN33_44195-T1|Name=CAN33_44195-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1986bp|location=Sequence derived from alignment at NKJJ01000022.1:1205193..1207178- (Aspergillus niger FDAARGOS_311)
ATGTCACCGCACAATGGAGCTCCTTCCTCCCAGGCGTCTATAGAAACAGC
GCCTTCATCAGCCCACGGAACACTCCATACCACTACCACCATTTCTGGCT
CACCCCCTTCGGATTCCTCGCGCAGCATCAGCATTGGTTCCTCCCTGGGA
CTTCCTCCCTCCTTACCCGGACGGCCGTCGAGCATTCCCTCGAAGAGGGT
CGAGATCCCCCGGCTCTCTGCAGCTACTACCGAGTTACTGGCGCGGGTTA
CCGGGAATCTCAAAGGACCGCAGCAGAGAAATGATAATGATAAATTTGTT
ACATGGAACCCATCAACAGTCACTCGGACGTTCGAAAGCCAGAATAGCAA
CTCAAAAATGGGAAAAATGAGGGCTTCTTCTACAATTATTGAATTGCCTA
CGGCGCCGTTCGTGTATTCGAACAATGTGGCGCCACCGGCGGTCCCTCAG
GCCGCCTCCCCAGTGCCTCAAGGAAACGCTGGAGACATAGTAAAGCCTAC
AAACCTACCGAATCTCGCTCCCAAACCACCCAGCATAATATCGGTCGACG
CATCACCAGCAAGTTCGGGGTCTCCAGTCCCGGTCAATGTCGACCTAAAA
CCAACAAGTTCAACGCCCGTCAATGCAGTTTCACGGCAGTCGGCGTCTCC
AATTCCAGTCAATATCGCTCCAAAGCCGAGCACAACGCCGGTCGGTGTTA
ATTCAGCACCAACACCATTGACTGCATCCATACCAGCAGAGCCCACAGCT
GCAATCAAAATCGCCCCTAAACCAAATGGGACATTGTCAGATGGTGCAGC
ACCAGCATCAACCTCATTGCCTACACCACAACAGCCACAGACGGCAGCCA
AGCCCAAGAAACCGCAAGCAGCAGCTGGCTCGCGCCAGCGAAAGGGTGCG
GCAAATGGTAACAAGCGCGGCAAGAAGCGCAGACGAAATAACGATAGTGA
CGGGGAAGATATCATAAGGGCCGGAGACTCCAGTAGCGACGAATCAGATG
TGGCACCAACAGCGACGCAAACGAAATCCGGCCGCCTGGTCAACCGGCCT
TCGTTATATGTACCTGCGCCGTCAACTCCTGCGGTAGCCAAGGAGGTAAG
CAACTCGGTGGACGCGTCTGATAATGCAGTCGTCGCACGAAAGCGTAAAC
GTATCCACCGCCGAGGGAAAGATGCGATCATCATTTGCTTGCATTGTCAA
AGGGGCCATAGCCCATTGAGCAATTCGATCGTATTCTGTGACGAGTGCAA
TGCTGCATGGCATCAGTGGTGTCACGACCCTCCTATTGGCGCAGACGTTG
TTGCGGTCAAGGAAAAGGAATGGTTCTGTCGAGAATGCCGACCTGTCCAA
ATTTCTGTCATTCAACCAACGGTCGTGCGGAGCAATCCCAACCTTACATC
TGGGCCATTAGTCCCTAATTATCCTCTATTATCAATCCCTAAAGGCGAGG
TTGGTGCAGCGGAGTTTTCGGCCGATGAGCGACGGGGCTTCCTGTCAAGT
CTTTCGCACGCCACCCTCGTTGAGCTGCTGATGACTATCTCGGACAACAA
CCCGATATTGCCGATGTTTCCTGAGAACATGAGGGACCTTCAGTCTTCAA
AGTTTGCTTTTCGTCTACCGATCTCCGATGCCCCGACTCCGTCGACATCC
GTGTCGGGTAATGTCTCGACAAGCAATGATACAAGGGATTCCGCGTCTGC
ATCTACTGAAGGGAACAAACAAAATGAGGATTCTGCACCCGAAGCTACAT
CTTCATCAACAACTCGAAGGCAGTATGAGGAGATCTCTGATGACGACTCG
GAATATGAATTCCAGGAGCACCGGTTGTATCCACGCGCTGGGAACGGGTT
CCGGCTATCGCTTAATGTGGATGACATGGATATTATGCGCGAAGACCCTG
CTTGTCCTACCTTCAGCTATTCGCTACACGGACCTGCGCAGGTACGCGCT
CAAATGAATGATATCGTTCCTGTGTGGGGAACATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR019786 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001965 |
| DBxref | PFAM:PF00628 |
| Product | PHD-finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1205193..1207178 - |
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