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CAN33_44205-T1, CAN33_44205-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44205-T1
Unique NameCAN33_44205-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1209580..1210547+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44205-T1 ID=CAN33_44205-T1|Name=CAN33_44205-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=968bp|location=Sequence derived from alignment at NKJJ01000022.1:1209580..1210547+ (Aspergillus niger FDAARGOS_311)
ATGTTCACCGGTCTCGTTGAGAAGATTGGGAGTGAGTCTCTAATCCTGCG
ACCATGACCACATAAACAGCAAAACTAATCACTCTCCTCTATCGCAGCGG
TCTCGTCCCTCGAGCCTCTCGATACCTCGTCAAGCGGGGGCGGGGGTACA
TCATTGACTATCACGGACTGTGAGGAGATCCTCACAGATTGCCATCTCGG
CGACAGTATAGCCGTCAATGGTATGAACTGCATTGCATGATACCAATTGA
CACACTCACATTCATTCCCATTGCACTTGATCCCTTTTTCCTCTGCTCTT
CCCTCGCCATCGTTGCCCCTCCCCCTTACCCCCACTCCCCCCAAAATCTC
GAAACAATAACCCCCACCAAACCCCCCGAAAAGAGAAATCCACCAAGCCA
ACATAATCGCATCAAACCAGGAACCTGCCTTACAGTAACGGCCTTCGATA
AAACCTGGTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAAAT
CTCGGCTCCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGCCGTCCT
GGGCGAAACGCGCATGGGCGGTCATTTCGTGCAGGGCCACGTCGACACCA
TCGCTAAGATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGT
ATGCAGCCGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAAGGGATA
TGTTACGCTGGATGGGGCTAGTTTGACTGTGACGAATGTTGTGGATGGCC
AGGAGGGATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAGAAGATT
GTCACGGCGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGATTGATAT
TGTGGGCAAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTG
CGGGTGGGGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATCGTGGAG
GAGAAGTTGAAAAGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1209580..1210547+

>CAN33_44205-T1 ID=CAN33_44205-T1|Name=CAN33_44205-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2061bp|location=Sequence derived from alignment at NKJJ01000022.1:1209580..1210547+ (Aspergillus niger FDAARGOS_311)
ATGTTCACCGGTCTCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAGCC
TCTCGATACCTCGTCAAGCGGGGGCGGGGGTACATCATTGACTATCACGG
ACTGTGAGGAGATCCTCACAGATTGCCATCTCGGCGACAGTATAGCCGTC
AATGTAACGGCCTTCGATAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGA
AACCCTCCGCCGCACAAATCTCGGCTCCCTGCAGACCAACTCCCGCGTGA
ACCTCGAACGCGCCGTCCTGGGCGAAACGCGCATGGGCGGTCATTTCGTG
CAGGGCCACGTCGACACCATCGCTAAGATCCTCTCCGTGACGCCGGAGGG
CAATGCGCTGGTGTTCCGTATGCAGCCGCGCGATATCGGCGTGATGCGGT
ATATCGTGGAGAAGGGATATGTTACGCTGGATGGGGCTAGTTTGACTGTG
ACGAATGTTGTGGATGGCCAGGAGGGATATTTTGAGGTGATGCTTATTGC
GTACACGCAGGAGAAGATTGTCACGGCGGCAAAGAAGCCCGGGGATTATG
TGAATGTGGAGATTGATATTGTGGGCAAATATGTTGAGAAGAGTGTGCAG
GGGTATTTTGCTGGTACTGCGGGTGGGGATATGAAGATGTTGGAGAAGAT
GGTAGAGAGGATCGTGGAGGAGAAGTTGAAAAGGTAGATGTTCACCGGTC
TCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAGCCTCTCGATACCTCG
TCAAGCGGGGGCGGGGGTACATCATTGACTATCACGGACTGTGAGGAGAT
CCTCACAGATTGCCATCTCGGCGACAGTATAGCCGTCAATGTAACGGCCT
TCGATAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGC
ACAAATCTCGGCTCCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGC
CGTCCTGGGCGAAACGCGCATGGGCGGTCATTTCGTGCAGGGCCACGTCG
ACACCATCGCTAAGATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTG
TTCCGTATGCAGCCGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAA
GGGATATGTTACGCTGGATGGGGCTAGTTTGACTGTGACGAATGTTGTGG
ATGGCCAGGAGGGATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAG
AAGATTGTCACGGCGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGAT
TGATATTGTGGGCAAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTG
GTACTGCGGGTGGGGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATC
GTGGAGGAGAAGTTGAAAAGGTAGATGTTCACCGGTCTCGTTGAGAAGAT
TGGGACGGTCTCGTCCCTCGAGCCTCTCGATACCTCGTCAAGCGGGGGCG
GGGGTACATCATTGACTATCACGGACTGTGAGGAGATCCTCACAGATTGC
CATCTCGGCGACAGTATAGCCGTCAATGTAACGGCCTTCGATAAAACCTG
GTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAAATCTCGGCT
CCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGCCGTCCTGGGCGAA
ACGCGCATGGGCGGTCATTTCGTGCAGGGCCACGTCGACACCATCGCTAA
GATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGTATGCAGC
CGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAAGGGATATGTTACG
CTGGATGGGGCTAGTTTGACTGTGACGAATGTTGTGGATGGCCAGGAGGG
ATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAGAAGATTGTCACGG
CGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGATTGATATTGTGGGC
AAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTGCGGGTGG
GGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATCGTGGAGGAGAAGT
TGAAAAGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44205CAN33_44205Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44205-T1.exon1CAN33_44205-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44205-T1.exon2CAN33_44205-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44205-T1.exon3CAN33_44205-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44205-T1.cdsCAN33_44205-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44205-T1CAN33_44205-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR026017
DBxrefInterPro:IPR001783
DBxrefInterPro:IPR023366
DBxrefPFAM:PF00677
Productriboflavin synthase alpha subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1209580..1210547 +
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