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CAN33_44275-T1, CAN33_44275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44275-T1
Unique NameCAN33_44275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1260942..1261798-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44275-T1 ID=CAN33_44275-T1|Name=CAN33_44275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=857bp|location=Sequence derived from alignment at NKJJ01000022.1:1260942..1261798- (Aspergillus niger FDAARGOS_311)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAA
CTAGGCAACAACAAATGATGTCTAACGGGTTATTGATCTGTATAGCGGCT
AAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGAC
GACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGG
CGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCG
ATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAAT
GTATGTTGTTTCGTTACGGTATCATTTGAGTGATGGGAACACGGCAACTG
ACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1260942..1261798-

>CAN33_44275-T1 ID=CAN33_44275-T1|Name=CAN33_44275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2676bp|location=Sequence derived from alignment at NKJJ01000022.1:1260942..1261798- (Aspergillus niger FDAARGOS_311)
TCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAG
AAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAAC
GCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGC
GCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATA
TCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCG
AAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATATGTGG
TCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAA
TGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGA
AGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAAC
GTAACGTCAAACAAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGA
CGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAACGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGA
ACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTAC
TCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGC
GGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGATACGG
TGGATCAGACAATATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGC
GGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGAT
ATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGA
TGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGTCAAATCCAAAC
CTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCG
GAAATGGCCATGGGATAAGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAACGCCCTTCGACGG
AAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCA
GCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGA
CTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGC
TCCATGACGCTTGATACGGTGGATCAGACAATATGTGGTCTTGGTTCGGC
GGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCAT
GCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGA
ATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAAC
AAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGA
ACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGC
TAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGA
CGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCG
GCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGC
GATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAA
TATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGC
CCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAG
CGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCG
GAAGAACGTAACGTCAAACAAGGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7CAN33_44275Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44275-T1CAN33_44275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44275-T1.cdsCAN33_44275-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44275-T1.exon4CAN33_44275-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_44275-T1.exon3CAN33_44275-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44275-T1.exon2CAN33_44275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44275-T1.exon1CAN33_44275-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264W71
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1260942..1261798 -
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