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CAN33_44350-T1, CAN33_44350-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44350-T1
Unique NameCAN33_44350-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1304700..1305955-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44350-T1 ID=CAN33_44350-T1|Name=CAN33_44350-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1256bp|location=Sequence derived from alignment at NKJJ01000022.1:1304700..1305955- (Aspergillus niger FDAARGOS_311)
ATGATTGTTCGGCAACTTGTGCGGCAAAGTGAGTTACTCCATGGATTGGG
TTTATTGATAGGAAATATTGATGCTGATTCCCCCGTCCCCATCTAGGCCG
CCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTT
CCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAA
GCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGG
TACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGTAAGT
ACCGCAATATTCTAGCTGTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAA
TATACATCCTCTGGTTCAGGAGTCAAATTCCACAGTCTCGGTAGCGATGT
GACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCA
CCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACAC
TCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAG
GGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCC
GTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTC
TTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGA
ATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGA
CCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGC
TTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCG
TGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTG
TCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATC
GACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGA
CGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAG
GAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTG
ACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCT
AGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCT
CTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGAC
GAATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1304700..1305955-

>CAN33_44350-T1 ID=CAN33_44350-T1|Name=CAN33_44350-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3339bp|location=Sequence derived from alignment at NKJJ01000022.1:1304700..1305955- (Aspergillus niger FDAARGOS_311)
GAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCA
GAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAAT
GCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACC
CCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATC
TCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGA
GGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGG
GACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCAC
ATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTT
GGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATG
ATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTT
GTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGG
TCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCCTA
CCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTG
ACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAG
AAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGC
CACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAG
AAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGA
GAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAGGCCGCCAGCTTCG
GGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGA
CGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAA
TTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGG
TGCACAAGAGAGATTGGATCCGAACACGCTCCGCCATGATTGTTCGGCAA
CTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGG
CGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACG
TTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACT
TCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGG
AACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGG
CCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCG
GGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGC
TCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATG
GCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGAT
GAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACT
TAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGT
TGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATCGACACC
GACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGACGACAG
TTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAG
TGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTAT
GAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGAC
CGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGG
GAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
GCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTC
TCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGA
GCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGC
CTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCAT
GATTGTTCGGCAACTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCAT
CTTGTCCCGATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGA
CTATCGTTGCGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTT
GCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAA
CACGCTCCGCCATGATTGTTCGGCAACTTGTGCGGCAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44350CAN33_44350Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44350-T1CAN33_44350-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44350-T1.cdsCAN33_44350-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44350-T1.exon3CAN33_44350-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44350-T1.exon2CAN33_44350-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44350-T1.exon1CAN33_44350-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09263J7D
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR005706
DBxrefInterPro:IPR001865
DBxrefPFAM:PF00318
ProductRibosomal protein S2 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1304700..1305955 -
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