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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1370229..1370988+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44455-T1 ID=CAN33_44455-T1|Name=CAN33_44455-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=760bp|location=Sequence derived from alignment at NKJJ01000022.1:1370229..1370988+ (Aspergillus niger FDAARGOS_311)
ATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGA
TGACGGCATCGAGGTCACCGTACGTATTGACCCTTGATTTCAACCCGGGC
ATTGGAATGGCAGGCAAGGATAAGACAAAGTGCTGGGAGAGAGCAGGAAA
AAAAAGGGTGTCGCGAGAAAGAGATGGATCTGGAGGATATCAAGGATTCG
GAACATGCAACAATTGCTGGGTTGAAAAATGCAAGGTTACAGGATCAAAT
TTGGACTAATAATGCAATTTCTTGAATATAGGCCGACAAGCTCCAGACTC
TCCTGTCTGCCGCCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATC
TTCGCCAAGGTAAATTAAATCCGTCCAAGCTTCGCAACACATCTCAGTTT
CATCATCGCATGCGATTCGCGATTCACCCGATTATCAATCATCACCACCC
TGGAATCAAACACACAAAACTTACACGTCGGTTTTTTCCAATAGGCTCTC
GAGGGCAAGGACATCAAGGAGCTCCTGACCAACGTCGGCTCCGCTGGCCC
TGCCGCCCCCGCTGCTGCTGCCGGTGGTGCTGCTGCCCCCGCTGAGGCTG
CTGCCGCTGAGGAGAAGAAGGAAGAAGGTACGGAACATCCAACATACCCA
TTGTCTTGGCGATTGCAATGGCAGGGCATAGGAAAAGGAACACTTGGACT
AACTTCTATACAGAGAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCT
TTTCGACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1370229..1370988+ >CAN33_44455-T1 ID=CAN33_44455-T1|Name=CAN33_44455-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1230bp|location=Sequence derived from alignment at NKJJ01000022.1:1370229..1370988+ (Aspergillus niger FDAARGOS_311)
ATGTCTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGA
TGACGGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCG
CCAAGGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCT
CTCGAGGGCAAGGACATCAAGGAGCTCCTGACCAACAAGAAGGAAGAAGA
GAAGGAGGAGTCCGACGAGGACATGGGCTTCGGTCTTTTCGACTAAATGT
CTACTGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGATGAC
GGCATCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAA
GGTTCCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCG
AGGGCAAGGACATCAAGGAGCTCCTGACCAACAAGAAGGAAGAAGAGAAG
GAGGAGTCCGACGAGGACATGGGCTTCGGTCTTTTCGACTAAATGTCTAC
TGCCGAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGATGACGGCA
TCGAGGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTT
CCCGAGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGG
CAAGGACATCAAGGAGCTCCTGACCAACAAGAAGGAAGAAGAGAAGGAGG
AGTCCGACGAGGACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCC
GAGCTCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGA
GGTCACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCG
AGGTTGAGCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAG
GACATCAAGGAGCTCCTGACCAACAAGAAGGAAGAAGAGAAGGAGGAGTC
CGACGAGGACATGGGCTTCGGTCTTTTCGACTAAATGTCTACTGCCGAGC
TCGCTTGCTCCTACGCCGCCCTCATCCTCGCCGATGACGGCATCGAGGTC
ACCGCCGACAAGCTCCAGACTCTCCTGTCTGCCGCCAAGGTTCCCGAGGT
TGAGCCCATCTGGACTTCCATCTTCGCCAAGGCTCTCGAGGGCAAGGACA
TCAAGGAGCTCCTGACCAACAAGAAGGAAGAAGAGAAGGAGGAGTCCGAC
GAGGACATGGGCTTCGGTCTTTTCGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006414 | translational elongation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027534 |
| DBxref | InterPro:IPR038716 |
| Product | 60s Acidic ribosomal protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1370229..1370988 + |
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