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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1409139..1410567- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44515-T1 ID=CAN33_44515-T1|Name=CAN33_44515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1429bp|location=Sequence derived from alignment at NKJJ01000022.1:1409139..1410567- (Aspergillus niger FDAARGOS_311)
ATGTCGACGTGGGGTGATTACTTCCGGGTCACCACGTAAGTCTTCTGAGT
CAGCCCCAGTCTATGATGATGGTGACATCGCACACCATCACCACCACACA
GACATAAACACCTCTGTTCATATACGCCCACATACTAATCGCATTGTTTC
TCTTCTCAGTTATGGTGAATCGCACTGCCGCTCTGTCGGCTGCATCGTCG
ACGGCTGCCCCCCAGGAATGGAACTCACCGAGGACGACATCCAGCCCCAG
ATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGACGACGCCTCGTAATGA
GAAGGACCGCGTTGAAATCCAGTCCGGAACGGAGTTTGGAGTTACCCTGG
GAACTCCGATTGGCATGATGGTGCGCAACGAAGACCAGAGACCCAAGGAC
TACGGCAACAGCACCATGGACCTGTACCCCCGCCCCAGTCACGCCGACTT
GACCTATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCGGTGGTGGTCGCA
GTAGTGCCCGTGAGACGATTGGTGAGTGAACCGCTTATCCCCAGATGGAG
TCCCATTGACACAATTTTTCCCCGGTTTCAGGCCGTGTGGCTGCCGGTGC
CATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAGATTGTCGCTT
TCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTACTCCCGAGCAC
CCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCAAGACCATCAC
CCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCCAACGCCGATG
CCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGACAACCACGAC
AGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCT
GGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGC
TCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGC
TGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCGTCTCCGATGT
CCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCGCCTCACCACCA
AGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCAACGGTGCCGAC
ATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTGGCCAGGCCCA
GAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAAGCCAAGGGCC
GTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGTCGAGGCCATG
TCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACTCCCGCGAGAG
CGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCCACTCGTCCCA
CTCTCGGCACCAACGGTCACAGCGCATAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1409139..1410567- >CAN33_44515-T1 ID=CAN33_44515-T1|Name=CAN33_44515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4668bp|location=Sequence derived from alignment at NKJJ01000022.1:1409139..1410567- (Aspergillus niger FDAARGOS_311)
GGCGGTATCTCCAACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCC
CCCGGCCACCATTGGCCAGGCCCAGAACACCGCCACCTACGACTTCGGCG
AGGGTATCCTCGAAGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGC
GCCGTCCCCATTGTCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCT
GATGGCTCAGTACTCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGC
CCAAGACCCTGCCCACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCA
TAAGCCGTGTGGCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCG
CACGGCGTCGAGATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCT
GTTCCCTCCTACTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACC
TCAACCTCCTCAAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCC
ACCCGCTGCCCCAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGA
GCAGTTCCGCGACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTA
TCCGTAACGTCCCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAG
GCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGA
GATCGGCTCCGGTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACG
ACCCCTTCATCGTCTCCGATTTATGGTGAATCGCACTGCCGCTCTGTCGG
CTGCATCGTCGACGGCTGCCCCCCAGGAATGGAACTCACCGAGGACGACA
TCCAGCCCCAGATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGACGACG
CCTCGTAATGAGAAGGACCGCGTTGAAATCCAGTCCGGAACGGAGTTTGG
AGTTACCCTGGGAACTCCGATTGGCATGATGGTGCGCAACGAAGACCAGA
GACCCAAGGACTACGGCAACAGCACCATGGACCTGTACCCCCGCCCCAGT
CACGCCGACTTGACCTATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCGG
TGGTGGTCGCAGTAGTGCCCGTGAGACGATTGATGTCGACGTGGGGTGAT
TACTTCCGGGTCACCACGGCGGTATCTCCAACGGTGCCGACATCTACTTC
CGCATCGCCTTCAAGCCCCCGGCCACCATTGGCCAGGCCCAGAACACCGC
CACCTACGACTTCGGCGAGGGTATCCTCGAAGCCAAGGGCCGTCACGACC
CCTGCGTCACTCCCCGCGCCGTCCCCATTGTCGAGGCCATGTCCGCGCTG
GTCGTCATGGACGCTCTGATGGCTCAGTACTCCCGCGAGAGCGCCAAGTC
TCTCCTGCCCCCGTTGCCCAAGACCCTGCCCACTCGTCCCACTCTCGGCA
CCAACGGTCACAGCGCATAAGCCGTGTGGCTGCCGGTGCCATCGCCGAAA
AGTACTTGCGCCTCTCGCACGGCGTCGAGATTGTCGCTTTCGTCTCCTCT
GTTGGCAACGAACACCTGTTCCCTCCTACTCCCGAGCACCCCACTGCCTC
CACCAACCCTGAATACCTCAACCTCCTCAAGACCATCACCCGCACTACCG
TCGACGAGTTCGCGCCCACCCGCTGCCCCAACGCCGATGCCGCCGCGCGC
ATGACCAAGGTGATCGAGCAGTTCCGCGACAACCACGACAGCATCGGTGG
TACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCTGGGTGAGCCCT
GCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCC
GCCACCAAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCGAGGTCCC
CGGCTCTATCCACAACGACCCCTTCATCGTCTCCGATTTATGGTGAATCG
CACTGCCGCTCTGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGAATGGA
ACTCACCGAGGACGACATCCAGCCCCAGATGACCCGCAGACGTCCCGGTC
AGAGTGCTCTGACGACGCCTCGTAATGAGAAGGACCGCGTTGAAATCCAG
TCCGGAACGGAGTTTGGAGTTACCCTGGGAACTCCGATTGGCATGATGGT
GCGCAACGAAGACCAGAGACCCAAGGACTACGGCAACAGCACCATGGACC
TGTACCCCCGCCCCAGTCACGCCGACTTGACCTATCTGGAGAAGTACGGC
GTCAAGGCCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGTGAGACGATTGA
TGTCGACGTGGGGTGATTACTTCCGGGTCACCACGGCGGTATCTCCAACG
GTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTGGC
CAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAAGC
CAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGTCG
AGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACTCC
CGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCCAC
TCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAAGCCGTGTGGCTGC
CGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAGATTG
TCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTACTCCC
GAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCAAGAC
CATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCCAACG
CCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGACAAC
CACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGT
CGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACG
CCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGGTTTC
GGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCGTCTC
CGATTTATGGTGAATCGCACTGCCGCTCTGTCGGCTGCATCGTCGACGGC
TGCCCCCCAGGAATGGAACTCACCGAGGACGACATCCAGCCCCAGATGAC
CCGCAGACGTCCCGGTCAGAGTGCTCTGACGACGCCTCGTAATGAGAAGG
ACCGCGTTGAAATCCAGTCCGGAACGGAGTTTGGAGTTACCCTGGGAACT
CCGATTGGCATGATGGTGCGCAACGAAGACCAGAGACCCAAGGACTACGG
CAACAGCACCATGGACCTGTACCCCCGCCCCAGTCACGCCGACTTGACCT
ATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCGGTGGTGGTCGCAGTAGT
GCCCGTGAGACGATTGATGTCGACGTGGGGTGATTACTTCCGGGTCACCA
CGGCGGTATCTCCAACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGC
CCCCGGCCACCATTGGCCAGGCCCAGAACACCGCCACCTACGACTTCGGC
GAGGGTATCCTCGAAGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCG
CGCCGTCCCCATTGTCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTC
TGATGGCTCAGTACTCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTG
CCCAAGACCCTGCCCACTCGTCCCACTCTCGGCACCAACGGTCACAGCGC
ATAAGCCGTGTGGCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTC
GCACGGCGTCGAGATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACC
TGTTCCCTCCTACTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATAC
CTCAACCTCCTCAAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCC
CACCCGCTGCCCCAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCG
AGCAGTTCCGCGACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTT
ATCCGTAACGTCCCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGA
GGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCG
AGATCGGCTCCGGTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAAC
GACCCCTTCATCGTCTCCGATTTATGGTGAATCGCACTGCCGCTCTGTCG
GCTGCATCGTCGACGGCTGCCCCCCAGGAATGGAACTCACCGAGGACGAC
ATCCAGCCCCAGATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGACGAC
GCCTCGTAATGAGAAGGACCGCGTTGAAATCCAGTCCGGAACGGAGTTTG
GAGTTACCCTGGGAACTCCGATTGGCATGATGGTGCGCAACGAAGACCAG
AGACCCAAGGACTACGGCAACAGCACCATGGACCTGTACCCCCGCCCCAG
TCACGCCGACTTGACCTATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCG
GTGGTGGTCGCAGTAGTGCCCGTGAGACGATTGATGTCGACGTGGGGTGA
TTACTTCCGGGTCACCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004107 | chorismate synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009073 | aromatic amino acid family biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262DUV |
| DBxref | InterPro:IPR020541 |
| DBxref | InterPro:IPR035904 |
| DBxref | InterPro:IPR000453 |
| DBxref | PFAM:PF01264 |
| Product | bifunctional chorismate synthase/riboflavin reductase [NAD(P)H] aro2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1409139..1410567 - |
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