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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:457131..458152+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4460-T1 ID=CAN33_4460-T1|Name=CAN33_4460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1022bp|location=Sequence derived from alignment at NKJJ01000019.1:457131..458152+ (Aspergillus niger FDAARGOS_311)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAAGTAAGCATCTCCCTGTCTTTT
CCCAGGGCATTCGATGATAATTCCCTTGCTATGTGACCTTTGATGACTGA
CTGATATCAGTGTCTACCCCCATTCACACTCCCAACAACCGCAAACGGAA
AGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGCATCACCTACCA
ACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACCGAAACATCAAG
CGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTCCCCGACTGCTG
GAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCGGACCGTGTGTGA
GCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAGCACCTCGACCCA
GCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAATCTGCCCTTCAG
TCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTATGCATACAATCG
TGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGAGCGACTTCACTC
CACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTTTCCTTGAGTTAC
CTGGATGGTGCGACCGACATAATTCACGCACTGCCCCGTTGGAGTACACC
ACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGATCTGCAAGGCTT
GGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGTGGAATTCAGTTA
CAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAATCACAACTCGGG
CGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCAGTTTGGGATGGA
TGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGCGGCAATGACCTT
GGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGGGCTCGGTACCCC
CGTCAAGGTTGGGCCATGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:457131..458152+ >CAN33_4460-T1 ID=CAN33_4460-T1|Name=CAN33_4460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2646bp|location=Sequence derived from alignment at NKJJ01000019.1:457131..458152+ (Aspergillus niger FDAARGOS_311)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTC
CCAACAACCGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGA
ATGTCAGCATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCC
AGTCAACCGAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTC
TCGCTCTCCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGCA
TCCTTCGGACCCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAATC
TGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTATG
CATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGAGC
GACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTTTC
CTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCGTT
GGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGATC
TGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGTGG
AATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAATC
ACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCAGT
TTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGCGG
CAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGGGC
TCGGTACCCCCGTCAAGGTTGGGCCATGGTGAATGAACAGCTTGGTGGCT
ACACCACCTGTGCCTCCTCATCACTTTTACGAATACTCCCGTCCTTCTCC
CTCCCGTCCAATGTCTACCCCCATTCACACTCCCAACAACCGCAAACGGA
AAGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGCATCACCTACC
AACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACCGAAACATCAA
GCGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTCCCCGACTGCT
GGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCGGACCCGTGGCA
TCTGCCCTTCAAGTCCTTCGACATTACGAATCTGCCCTTCAGTCGTCGTT
CCCGCTCGGTGGCAACTCCGAATCAGATTATGCATACAATCGTGTCCGAC
AACCGCTGGGGAATCTTCTAGATGCTCTGAGCGACTTCACTCCACATTTC
CTACCCCCTCACGAGACGCAGTCGTCTGTTTCCTTGAGTTACCTGGATGG
TGCGACCGACATAATTCACGCACTGCCCCGTTGGAGTACACCACAGAACA
ACCTCGAGCGGGATTCTGCATACGATGAGATCTGCAAGGCTTGGATTTTG
GTGATTCGGGAAGCAGCCAAGCGTGGTGGTGGAATTCAGTTACAATACGG
TGGTTGGGATCAGAAGTTGGCGAAGCACAATCACAACTCGGGCGGTAAAC
TGCAGGCAGCCGTCAACGAGCTTGGTTCCAGTTTGGGATGGATGCACAGA
CCGGATGCCCAAGGTTATGGAAGCCCAGGCGGCAATGACCTTGGGTCCAT
CCGGGAGCAACTCCTGTCGGGCACATACGGGCTCGGTACCCCCGTCAAGG
TTGGGCCATGGTGAATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCT
CATCACTTTTACGAATACTCCCGTCCTTCTCCCTCCCGTCCAATGTCTAC
CCCCATTCACACTCCCAACAACCGCAAACGGAAAGCCGACGATGAGAATG
ATCACGATGGTCGAATGTCAGCATCACCTACCAACTCTCCCGCCTTGACC
CCGAGAACCCTTCCAGTCAACCGAAACATCAAGCGTGCTCGTCCGAATGT
TAGCGGACGGCCTCTCGCTCTCCCCGACTGCTGGAGACCTTGGACACAGA
CGCTCTTCGGGGCATCCTTCGGACCCGTGGCATCTGCCCTTCAAGTCCTT
CGACATTACGAATCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTC
CGAATCAGATTATGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTC
TAGATGCTCTGAGCGACTTCACTCCACATTTCCTACCCCCTCACGAGACG
CAGTCGTCTGTTTCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCA
CGCACTGCCCCGTTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTG
CATACGATGAGATCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCC
AAGCGTGGTGGTGGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTT
GGCGAAGCACAATCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACG
AGCTTGGTTCCAGTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTAT
GGAAGCCCAGGCGGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTC
GGGCACATACGGGCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0071630 | nuclear protein quality control by the ubiquitin-proteasome system |
| GO:0031144 | proteasome localization |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013868 |
| DBxref | InterPro:IPR038422 |
| DBxref | PFAM:PF08559 |
| Product | Tethering factor for nuclear proteasome sts1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:457131..458152 + |
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