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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1478179..1479235+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44620-T1 ID=CAN33_44620-T1|Name=CAN33_44620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1057bp|location=Sequence derived from alignment at NKJJ01000022.1:1478179..1479235+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCTTCAAAGTGGGGTATGTCCTCTTTTGGAGATTTTTGTGGCCC
TCGCCCGCAATAGGGACATACATTGCGGGACAACATGGCGAATCATTCAC
GATACTGACGGCTTCTTTCAGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTGAG
TTTTTGCCGCCCCTCCCCCTCCTTTTCCATTTTTGCCTCACAATTTGCCC
CGCGCTGTTTCTCTTGGCCTCAGTCGCTGAAAACTCGCGCCCCCCCCCCC
CCCCCCCCATCATTTTTTCCCCCGTCCACGATCTGACCGAATGAACTAGG
TCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAG
GCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGC
CAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGA
AGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCC
GAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCA
CGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCA
GCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCC
GTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTT
CACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGA
AGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAG
GACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCT
CAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGA
AGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAAC
AAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTT
CATGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1478179..1479235+ >CAN33_44620-T1 ID=CAN33_44620-T1|Name=CAN33_44620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2904bp|location=Sequence derived from alignment at NKJJ01000022.1:1478179..1479235+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCTCC
TGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCTCG
ACTCCTGGGACGCCGCCGAAGATTCCGAAAGCAAGGCACAGCGGATACAG
GAAAAGAAGGCCCAGCGGAAGGCAGATGCCGATGCTGAGGATTCGGACGA
CAGCGACGAGGACGAGGCCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGA
AGGACGCTGACCTTAAGCACGCCGAGGACCTGTTCGGCGACATCGACCTG
AACCGTATGCGCAACCGCAGCGCCCCCAAGGCCGTTGTCATCAGTGACGG
GACCGACCCGACCCAGGCCGTCGATCTGTCGGCTATGCCTCTCTTCAAGC
CCGCCACCAAGGACCAGTTCACCCGCGTTACGACCACCCTTATCCCTCTG
TTGACGACCCAGTCGAAGAAGCCCCAGTATGCTCTGTGGGCGCAGGACTT
CATCAAGCAGCTCGTCAAGGACCTGCCCAGCGGTGATGTCAAAAAGATCG
CTTCCTCGCTGACTACTCTCAGCAATGAGAAGATGAAGGAGGAGCGTGCT
GCCGATAAGGGTAACAAGAAGACCAAGGCGGCCAAGACCAAGGTCTCTCT
GGTCACCTCTAGAGAGAACAAGATTGAAACCAACTCTTATGATGATGATG
GGTTGGATGACGATGACTTCATGTGAATGGCTCCTTCAAAGTGGGATGAC
GAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCCGCCGCAAGTTCGA
CGACGAGGAAGAGGAAGATGTCCTCGACTCCTGGGACGCCGCCGAAGATT
CCGAAAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCA
GATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCG
GAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCG
AGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCC
CCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGA
TCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCC
GCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCC
CAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCT
GCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCA
ATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACC
AAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGAT
TGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGT
GAATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCT
CGACTCCTGGGACGCCGCCGAAGATTCCGAAAGCAAGGCACAGCGGATAC
AGGAAAAGAAGGCCCAGCGGAAGGCAGATGCCGATGCTGAGGATTCGGAC
GACAGCGACGAGGACGAGGCCGAGCGGAGAGCCCGTCTCCGCAAGACGGA
GAAGGACGCTGACCTTAAGCACGCCGAGGACCTGTTCGGCGACATCGACC
TGAACCGTATGCGCAACCGCAGCGCCCCCAAGGCCGTTGTCATCAGTGAC
GGGACCGACCCGACCCAGGCCGTCGATCTGTCGGCTATGCCTCTCTTCAA
GCCCGCCACCAAGGACCAGTTCACCCGCGTTACGACCACCCTTATCCCTC
TGTTGACGACCCAGTCGAAGAAGCCCCAGTATGCTCTGTGGGCGCAGGAC
TTCATCAAGCAGCTCGTCAAGGACCTGCCCAGCGGTGATGTCAAAAAGAT
CGCTTCCTCGCTGACTACTCTCAGCAATGAGAAGATGAAGGAGGAGCGTG
CTGCCGATAAGGGTAACAAGAAGACCAAGGCGGCCAAGACCAAGGTCTCT
CTGGTCACCTCTAGAGAGAACAAGATTGAAACCAACTCTTATGATGATGA
TGGGTTGGATGACGATGACTTCATGTGAATGGCTCCTTCAAAGTGGGATG
ACGAAGAAGAGAGTGTCTCTCCCCCTCCTGTGGTTGCCCGCCGCAAGTTC
GACGACGAGGAAGAGGAAGATGTCCTCGACTCCTGGGACGCCGCCGAAGA
TTCCGAAAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGG
CAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAG
CGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGC
CGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCG
CCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTC
GATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCAC
CCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGC
CCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGAC
CTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAG
CAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGA
CCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAG
ATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCAT
GTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013906 |
| DBxref | InterPro:IPR023194 |
| DBxref | PFAM:PF08597 |
| Product | Translation initiation factor 3 subunit J component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1478179..1479235 + |
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