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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1505427..1506615- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44665-T1 ID=CAN33_44665-T1|Name=CAN33_44665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1189bp|location=Sequence derived from alignment at NKJJ01000022.1:1505427..1506615- (Aspergillus niger FDAARGOS_311)
ATGGCAGTGCCTGCCTTGCTCGTGCCATTCGCTATACCCCAGGGTTGATA
ATATCGCAGGGCTCATTAAAGATGCACGTCCCCCCGCAGCCCAAGGGATT
AAGTATTGTTGAAGTTATCTAAACTAGTCTCGAGTCATTCGTTTACGAAC
CCCTCTTTCTCACCCTCTTCCCCCCCCTCCTCCTCCTCCCTCACCTTCGC
AGCTCGTATTCCTCATCCTCCTATTCCTGTCCCCAATAAATATAGCTAGT
AGCCTCACGGGCTCCAGTTGTATACCTACATTTGATTACTACCTCCACCA
CAACATAAACAAACAGATAACCCACACGAACCACCACCACCACCGCAACC
ATGTTCTGGTTCTCATCCCACCAACAACAACAGCAACAACAGACTCCTCT
CCTCCCACCCCTACCCACTTCGAAATCCAAAATCCGTAGAACCCTCAAAG
CCCCCGGCCGTCCCATCGCCATCCGCAAAGACCAAATCACCGACACCAAA
ACCCTTCTAATCGTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGGCATA
CAAAATCCAAGATGCCGACGGCATAACGCTCTACACCGCTACGGGGCGCA
AATTCAGCGACCGACCCTGTCGCGAGTTTCGTGATGCCTCGGGACTTCCG
CTCTTTGAACTACACCGCAAGACCTCTTTCAAGAACAACTGGTCCGTCAC
CTTACCCGGCAGCAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTGCAGC
GCTCATCCTTCAGCGCCGCTGGCTGGGGGAACTGCAACTTCACCATCACA
TTCGACAATGTAGCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTACCCT
GACGTTGGAGGTACAACGGCATGGGAATGTGTTGGCGCTGTTTGATATCG
TGGATGGGGATCGCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCATAAT
GAGAAGTTGGCGCTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTGTTCT
GGATGTCATTGTTACTCCCGGGGTAGATATGGCTTTGGTGAGTTTTCATC
TTATTCTTTTCACGGAGTATATTTACTGCATACAATATATCATACTTTCT
ACAGGATTATGTCTAACCATCTCGCGGTTCTTTAGATTGCAACGATTGCG
GTCATCGCATCAGACACAGTGTTTGCTTCGAATTATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1505427..1506615- >CAN33_44665-T1 ID=CAN33_44665-T1|Name=CAN33_44665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2052bp|location=Sequence derived from alignment at NKJJ01000022.1:1505427..1506615- (Aspergillus niger FDAARGOS_311)
ATTGCAACGATTGCGGTCATCGCATCAGACACAGTGTTTGCTTCGAATTA
TTGACCCCCGGCCGTCCCATCGCCATCCGCAAAGACCAAATCACCGACAC
CAAAACCCTTCTAATCGTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGG
CATACAAAATCCAAGATGCCGACGGCATAACGCTCTACACCGCTACGGGG
CGCAAATTCAGCGACCGACCCTGTCGCGAGTTTCGTGATGCCTCGGGACT
TCCGCTCTTTGAACTACACCGCAAGACCTCTTTCAAGAACAACTGGTCCG
TCACCTTACCCGGCAGCAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTG
CAGCGCTCATCCTTCAGCGCCGCTGGCTGGGGGAACTGCAACTTCACCAT
CACATTCGACAATGTAGCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTA
CCCTGACGTTGGAGGTACAACGGCATGGGAATGTGTTGGCGCTGTTTGAT
ATCGTGGATGGGGATCGCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCA
TAATGAGAAGTTGGCGCTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTG
TTCTGGATGTCATTGTTACTCCCGGGGTAGATATGGCTTTGATGGCAGTG
CCTGCCTTGCTCGTGCCATTCGCTATACCCCAGGATTGCAACGATTGCGG
TCATCGCATCAGACACAGTGTTTGCTTCGAATTATTGACCCCCGGCCGTC
CCATCGCCATCCGCAAAGACCAAATCACCGACACCAAAACCCTTCTAATC
GTGCGTCCCCAAGGCGACGCCCAATCCGCCGTGGCATACAAAATCCAAGA
TGCCGACGGCATAACGCTCTACACCGCTACGGGGCGCAAATTCAGCGACC
GACCCTGTCGCGAGTTTCGTGATGCCTCGGGACTTCCGCTCTTTGAACTA
CACCGCAAGACCTCTTTCAAGAACAACTGGTCCGTCACCTTACCCGGCAG
CAACCCAGCCAGTCCGATAGCCAAAGGTGCTCTGCAGCGCTCATCCTTCA
GCGCCGCTGGCTGGGGGAACTGCAACTTCACCATCACATTCGACAATGTA
GCTGCGGCGGACGGGAAGCAGCCTGAGGAGCGTACCCTGACGTTGGAGGT
ACAACGGCATGGGAATGTGTTGGCGCTGTTTGATATCGTGGATGGGGATC
GCAAGATCGCTGAGGTGAAGGAGAGTATTCGCCATAATGAGAAGTTGGCG
CTTATGCCTGCGTCTCGGCTTGGGTATCGCCCTGTTCTGGATGTCATTGT
TACTCCCGGGGTAGATATGGCTTTGATGGCAGTGCCTGCCTTGCTCGTGC
CATTCGCTATACCCCAGGATTGCAACGATTGCGGTCATCGCATCAGACAC
AGTGTTTGCTTCGAATTATTGACCCCCGGCCGTCCCATCGCCATCCGCAA
AGACCAAATCACCGACACCAAAACCCTTCTAATCGTGCGTCCCCAAGGCG
ACGCCCAATCCGCCGTGGCATACAAAATCCAAGATGCCGACGGCATAACG
CTCTACACCGCTACGGGGCGCAAATTCAGCGACCGACCCTGTCGCGAGTT
TCGTGATGCCTCGGGACTTCCGCTCTTTGAACTACACCGCAAGACCTCTT
TCAAGAACAACTGGTCCGTCACCTTACCCGGCAGCAACCCAGCCAGTCCG
ATAGCCAAAGGTGCTCTGCAGCGCTCATCCTTCAGCGCCGCTGGCTGGGG
GAACTGCAACTTCACCATCACATTCGACAATGTAGCTGCGGCGGACGGGA
AGCAGCCTGAGGAGCGTACCCTGACGTTGGAGGTACAACGGCATGGGAAT
GTGTTGGCGCTGTTTGATATCGTGGATGGGGATCGCAAGATCGCTGAGGT
GAAGGAGAGTATTCGCCATAATGAGAAGTTGGCGCTTATGCCTGCGTCTC
GGCTTGGGTATCGCCCTGTTCTGGATGTCATTGTTACTCCCGGGGTAGAT
ATGGCTTTGATGGCAGTGCCTGCCTTGCTCGTGCCATTCGCTATACCCCA
GG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR025659 |
| DBxref | InterPro:IPR038595 |
| DBxref | InterPro:IPR007612 |
| DBxref | PFAM:PF04525 |
| Product | Tubby C 2 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1505427..1506615 - |
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