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CAN33_44740-T1, CAN33_44740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44740-T1
Unique NameCAN33_44740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1550842..1551549+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44740-T1 ID=CAN33_44740-T1|Name=CAN33_44740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=708bp|location=Sequence derived from alignment at NKJJ01000022.1:1550842..1551549+ (Aspergillus niger FDAARGOS_311)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACGTTAGTCTTGAATACTGCTTCCC
AATTCAAAGTGGGCACCATGGCTGACCCCAATTGCAGTTTGTATTGTACC
AACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATAT
GCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTCGCCATGAAGACCC
AAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGC
ACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAAT
GGTATGTTTTTGCATAGTGCAGTGCGGTTGTTCCTCGCTCATTGACTCGG
GAATATAGAAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGG
CTGCGCGGAACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCAC
GGGAGCATCCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGAT
CGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAA
GCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGA
AGCCCCTATGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATG
AAGATTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1550842..1551549+

>CAN33_44740-T1 ID=CAN33_44740-T1|Name=CAN33_44740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1773bp|location=Sequence derived from alignment at NKJJ01000022.1:1550842..1551549+ (Aspergillus niger FDAARGOS_311)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACTTTGTATTGTACCAACCTCCCAG
ACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATATGCTTTTTTCA
ACCTACGGCACCGTTCTTGATGTTGTCGCCATGAAGACCCAAAAGATGCG
TGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGCACACAGGCTA
TGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAATGAAAATCGTG
TATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAA
TGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGC
TCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCG
AAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAA
GCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGG
ACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAAATGGCAACC
AGAGTTCTTCCAGCGCGCGGTGGTGATCAAGGTAAACCCGCTTCTGCTAC
CGGACTCCCTAACCAAACTTTGTATTGTACCAACCTCCCAGACAAGCTGC
GCAAGCATGACCTACGGCTATCCCTCTATATGCTTTTTTCAACCTACGGC
ACCGTTCTTGATGTTGTCGCCATGAAGACCCAAAAGATGCGTGGTCAGGC
CCATATTGTTTTTAAGGATGTTCAAGCTAGCACACAGGCTATGCGGGCTC
TTCAGGGGTTTGAGTTTTTCGGCAAACAAATGAAAATCGTGTATGCTAAG
GGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCAC
TACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAAT
CGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGC
GGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCG
TGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATG
TGCCAATGGAAGCTTCATCGGATGAAGATTAAATGGCAACCAGAGTTCTT
CCAGCGCGCGGTGGTGATCAAGGTAAACCCGCTTCTGCTACCGGACTCCC
TAACCAAACTTTGTATTGTACCAACCTCCCAGACAAGCTGCGCAAGCATG
ACCTACGGCTATCCCTCTATATGCTTTTTTCAACCTACGGCACCGTTCTT
GATGTTGTCGCCATGAAGACCCAAAAGATGCGTGGTCAGGCCCATATTGT
TTTTAAGGATGTTCAAGCTAGCACACAGGCTATGCGGGCTCTTCAGGGGT
TTGAGTTTTTCGGCAAACAAATGAAAATCGTGTATGCTAAGGGTCCCTCG
GACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCACTACAACATC
TGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAATCGATATTTA
GCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTT
AATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGA
AAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATGTGCCAATGG
AAGCTTCATCGGATGAAGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44740CAN33_44740Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44740-T1.exon1CAN33_44740-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44740-T1.exon2CAN33_44740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44740-T1.exon3CAN33_44740-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44740-T1.cdsCAN33_44740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44740-T1CAN33_44740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1550842..1551549 +
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