You are here

Home

CAN33_44905-T1, CAN33_44905-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44905-T1
Unique NameCAN33_44905-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1740730..1741174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44905-T1 ID=CAN33_44905-T1|Name=CAN33_44905-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=445bp|location=Sequence derived from alignment at NKJJ01000022.1:1740730..1741174+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCCCCCATGCTCTCGCGACGCCTCCTGCTCACGGAAACCGTGTC
CTCCGCCGCCGCCGTAGGACGGTGGTCTCGTTTCGCTATCAATGCCTCCG
TCTGGTCTCACAACTGGCTTAAGCCCGCAGCCATCTCCTTGAACATCCCC
GGGATCATGGAGGGCCTTTGGGACTCTGTTCTCCGCGCCGTCCCCAAGAA
GAAGACCTCTCACATGAAGAAGCGTCATCGGCAAATGGCTGGCAAGGCTC
TGAAGGACGTCAAGAGTCTCAGCACATGCTCCGGATGTGGGCAGGTGAAG
CGCTCGCACGTCCTGTGCCCCCATTGCGTTGAAAGTAGGTGCACATCTCT
GCGATCGAGTTTCCCCCCAATATCATTCTTAGCGACTGACTGTGTACCGA
CCTCTAGGTGTCAAGAAGCAATGGAAGCAAACCCAGACGGCTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:1740730..1741174+

>CAN33_44905-T1 ID=CAN33_44905-T1|Name=CAN33_44905-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=744bp|location=Sequence derived from alignment at NKJJ01000022.1:1740730..1741174+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCCCCCATGCTCTCGCGACGCCTCCTGCTCACGGAAACCGTGTC
CTCCGCCGCCGCCGTAGGACGGTGGTCTCGTTTCGCTATCAATGCCTCCG
TCTGGTCTCACAACTGGCTTAAGCCCGCAGCCATCTCCTTGAACATCCCC
GGGATCATGGAGGGCCTTTGGGACTCTGTTCTCCGCGCCGTCCCCAAGAA
GAAGACCTCTCACATGAAGAAGCGTCATCGGCAAATGGCTGGCAAGGCTC
TGAAGGACGTCAAGAGTCTCAGCACATGCTCCGGATGTGGGCAGGTGAAG
CGCTCGCACGTCCTGTGCCCCCATTGCGTTGAAAGTGTCAAGAAGCAATG
GAAGCAAACCCAGACGGCTTAAATGTCCGCCCCCATGCTCTCGCGACGCC
TCCTGCTCACGGAAACCGTGTCCTCCGCCGCCGCCGTAGGACGGTGGTCT
CGTTTCGCTATCAATGCCTCCGTCTGGTCTCACAACTGGCTTAAGCCCGC
AGCCATCTCCTTGAACATCCCCGGGATCATGGAGGGCCTTTGGGACTCTG
TTCTCCGCGCCGTCCCCAAGAAGAAGACCTCTCACATGAAGAAGCGTCAT
CGGCAAATGGCTGGCAAGGCTCTGAAGGACGTCAAGAGTCTCAGCACATG
CTCCGGATGTGGGCAGGTGAAGCGCTCGCACGTCCTGTGCCCCCATTGCG
TTGAAAGTGTCAAGAAGCAATGGAAGCAAACCCAGACGGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44905CAN33_44905Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44905-T1.exon1CAN33_44905-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44905-T1.exon2CAN33_44905-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44905-T1.cdsCAN33_44905-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44905-T1CAN33_44905-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR002677
DBxrefPFAM:PF01783
ProductRibosomal L32p family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1740730..1741174 +
Powered by Drupal