You are here

Home

CAN33_44910-T1, CAN33_44910-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44910-T1
Unique NameCAN33_44910-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1741798..1742985+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44910-T1 ID=CAN33_44910-T1|Name=CAN33_44910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1188bp|location=Sequence derived from alignment at NKJJ01000022.1:1741798..1742985+ (Aspergillus niger FDAARGOS_311)
ATGGTTCGTATATCTTGAATGACTCCCTACAATCTCTGGCATCTACTAAT
ATCAAGAACAGCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACA
AGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACT
ACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGT
TGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTA
TCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGG
GCAAAGGATGAGGGGGCCTCTGGTAAGTAGTACTCCGCTGTGTCAATCCT
GCGTCTGACCATGATCCAGTCAACAAGGCGACGCCTGCAGATGTCTGGGC
CATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTATGCAAGATG
GTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGAC
TATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGGTAGGTGAAGA
CTAGTCTACTTCCGACACTGTTGGGGGCTCAAACTCATGGATCATCTTTC
TAGTCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGT
TTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGTG
CGTAATCTGTTGTGCTAGCTTCAAACGAAGCAGACACGAGTCCGGATGAT
TGTCTAACCTGTGTATACAGGCCTGGTTAAACCTGTACGAGCTGTTGCAT
TCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGATTCCAAGGTAATT
GTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAGTCTCTCGGGGCA
CACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGGGGGAGTATCTCC
TCAGCGGGTAAGTGCTATGCATATCCCCTGTGAATGCTATCTAACGCTCA
AAAGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCAATAGACACGAGAGCA
TGTGTGGCCACCCATTCCGAAACAGAGAAAGCAATATGGAGTGTCAAGTG
GCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCACGGCGGGTGCAAACC
GGAGCATATCATTCTACCGTGAAGCCACTGGTGGTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:1741798..1742985+

>CAN33_44910-T1 ID=CAN33_44910-T1|Name=CAN33_44910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5418bp|location=Sequence derived from alignment at NKJJ01000022.1:1741798..1742985+ (Aspergillus niger FDAARGOS_311)
ATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAAGCA
GATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTACAG
ACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTTGGG
TGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTATCGG
ATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGGCAA
AGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGGGCC
ATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTATGCAAGATGG
TCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGACT
ATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCGGATGGC
CGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAGTAC
AGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTGTAC
GAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGAT
TCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAG
TCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGG
GGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCA
ATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGCAAT
ATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCA
CGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGTGGT
TAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAA
GCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTA
CAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTT
GGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTAT
CGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGG
CAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGG
GCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTATGCAAGA
TGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAG
ACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCGGAT
GGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAG
TACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTG
TACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGA
GATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGC
AAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCA
CGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGG
TCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGC
AATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTG
CCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGT
GGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGA
CAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGA
CTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAA
GTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAG
TATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCT
GGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTC
TGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTATGCA
AGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCC
GAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCG
GATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTT
CAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAAC
CTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCT
GGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGT
GGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCC
CCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTT
TGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAA
AGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGAT
TTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACT
GGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGAC
TGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACT
CGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCAT
AAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGT
CAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAG
TCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGAT
GTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTAT
GCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAA
TCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCC
GCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACAT
TTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTA
AACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCT
GCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACA
AGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGA
GCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAA
GTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGA
GAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAG
GATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCC
ACTGGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGT
GACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCC
ACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCC
CATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGC
CGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACG
GAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCA
GATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGT
TATGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGG
AAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTG
TCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTA
CATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGG
TTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCT
GCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGA
ACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGT
GGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTC
AAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAAC
AGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAG
TAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAA
GCCACTGGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGC
CGTGACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAG
TCCACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGT
GCCCATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAG
GGCCGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACG
ACGGAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCT
GCAGATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGG
TGTTATGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCG
AGGAAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGAT
TTGTCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGT
TTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCC
TGGTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTT
GCTGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGG
TGAACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTT
CGTGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAG
GTCAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGA
AACAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGAT
CAGTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGT
GAAGCCACTGGTGGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44910CAN33_44910Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44910-T1CAN33_44910-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44910-T1.exon1CAN33_44910-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44910-T1.exon2CAN33_44910-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44910-T1.exon3CAN33_44910-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44910-T1.exon4CAN33_44910-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_44910-T1.exon5CAN33_44910-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_44910-T1.exon6CAN33_44910-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44910-T1.cdsCAN33_44910-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1741798..1742985 +
Powered by Drupal