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CAN33_4500-T1, CAN33_4500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4500-T1
Unique NameCAN33_4500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:475575..476451+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4500-T1 ID=CAN33_4500-T1|Name=CAN33_4500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=877bp|location=Sequence derived from alignment at NKJJ01000019.1:475575..476451+ (Aspergillus niger FDAARGOS_311)
ATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGC
ACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAA
TGCACGATGTCCCCCCACTGAGGTCCTGGTGCGGAACCGACCTCAACAAC
ACCAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCG
CAGGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAG
CCGCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCA
AGGAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTT
GTCGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCA
GCAGCGGGGAAAGCACTTGGATGGTGAGAGGTATGTCTAGTGTCCTCGAT
CTGTAGGCGGGAGGATCTCGCCAATAATTAGATATTTGATGCTAACTCCC
CCGGTTTCCGGTGAAATAGCGTTGTTCAGCGACAGCTTTGGCTCCTTAAT
AATGTCCCCGATATGACCAAGAGCGCCGCTTACGATATTGCACGCCGCGA
GTTCTACCGCCTCCGTCTACAGGAAGACATTGAACGACGTGTTGCTGCTG
AGGAAGCCGAAGCTACTGGTGCTGTGTTCGGACCGACACGTCTACAGATC
GGTATGGACCTCGAGAACAAGGAGTATGAGCGTTGGAAGGAATGGGCCAA
GTTGCAGGCCCAGCTTTCGGACCAGAGAATGGCTGCGTTCCTTGGGGCTC
CGGAAGTCCAAGCTGCTGAGGAGCAAGAGACGAGCTTGGATGATGACGCC
ACGGAAAAGGTTGCGGTAGCAGCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:475575..476451+

>CAN33_4500-T1 ID=CAN33_4500-T1|Name=CAN33_4500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2187bp|location=Sequence derived from alignment at NKJJ01000019.1:475575..476451+ (Aspergillus niger FDAARGOS_311)
ATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGC
ACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAA
TGCACGATCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCGCAGGCCGTC
TTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAGCCGCATGTT
CCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCAAGGAATTTT
TCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTTGTCGAAAAG
TCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCAGCAGCGGGG
AAAGCACTTGGATGGTGAGAGCGTTGTTCAGCGACAGCTTTGGCTCCTTA
ATAATGTCCCCGATATGACCAAGAGCGCCGCTTACGATATTGCACGCCGC
GAGTTCTACCGCCTCCGTCTACAGGAAGACATTGAACGACGTGTTGCTGC
TGAGGAAGCCGAAGCTACTGGTGCTGTGTTCGGACCGACACGTCTACAGA
TCGGTATGGACCTCGAGAACAAGGAGTATGAGCGTTGGAAGGAATGGGCC
AAGTTGCAGGCCCAGCTTTCGGACCAGAGAATGGCTGCGTTCCTTGGGGC
TCCGGAAGTCCAAGCTGCTGAGGAGCAAGAGACGAGCTTGGATGATGACG
CCACGGAAAAGGTTGCGGTAGCAGCCTGAATGGGCAAATATAACCTCACG
GCCCTCCGGGTTCGCCAAATCGCTGTGGCACAGCAATCCGCCGGCAAACT
TCGTCAAACACCCAAATGGCTTGATATAATGCACGATCGCCTGAAGACTG
TTCCTGGCGCATCGAGGCCGCAGGCCGTCTTCGAAGTCCAGGAGAAACGC
ATCAAGCCGAAGAAGGCAAGCCGCATGTTCCAGCCTGTCGAAATCAAATA
CGAGGAGGATCAACTGCGCAAGGAATTTTTCCGCGACCATCCTTGGGAGC
TTGCCCGACCCCGTGTGCTTGTCGAAAAGTCCGGCAAGGACTTTGAGAGA
TATAACTGGAGCCGGCTCCAGCAGCGGGGAAAGCACTTGGATGGTGAGAG
CGTTGTTCAGCGACAGCTTTGGCTCCTTAATAATGTCCCCGATATGACCA
AGAGCGCCGCTTACGATATTGCACGCCGCGAGTTCTACCGCCTCCGTCTA
CAGGAAGACATTGAACGACGTGTTGCTGCTGAGGAAGCCGAAGCTACTGG
TGCTGTGTTCGGACCGACACGTCTACAGATCGGTATGGACCTCGAGAACA
AGGAGTATGAGCGTTGGAAGGAATGGGCCAAGTTGCAGGCCCAGCTTTCG
GACCAGAGAATGGCTGCGTTCCTTGGGGCTCCGGAAGTCCAAGCTGCTGA
GGAGCAAGAGACGAGCTTGGATGATGACGCCACGGAAAAGGTTGCGGTAG
CAGCCTGAATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATC
GCTGTGGCACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCT
TGATATAATGCACGATCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCGC
AGGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAGC
CGCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCAA
GGAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTTG
TCGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCAG
CAGCGGGGAAAGCACTTGGATGGTGAGAGCGTTGTTCAGCGACAGCTTTG
GCTCCTTAATAATGTCCCCGATATGACCAAGAGCGCCGCTTACGATATTG
CACGCCGCGAGTTCTACCGCCTCCGTCTACAGGAAGACATTGAACGACGT
GTTGCTGCTGAGGAAGCCGAAGCTACTGGTGCTGTGTTCGGACCGACACG
TCTACAGATCGGTATGGACCTCGAGAACAAGGAGTATGAGCGTTGGAAGG
AATGGGCCAAGTTGCAGGCCCAGCTTTCGGACCAGAGAATGGCTGCGTTC
CTTGGGGCTCCGGAAGTCCAAGCTGCTGAGGAGCAAGAGACGAGCTTGGA
TGATGACGCCACGGAAAAGGTTGCGGTAGCAGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005763mitochondrial small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM25CAN33_4500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4500-T1.exon1CAN33_4500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4500-T1.exon2CAN33_4500-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4500-T1.exon3CAN33_4500-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4500-T1.cdsCAN33_4500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4500-T1CAN33_4500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264X41
DBxrefInterPro:IPR016939
DBxrefPFAM:PF13741
Productmitochondrial ribosomal small subunit component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:475575..476451 +
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