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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1869121..1870061- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45160-T1 ID=CAN33_45160-T1|Name=CAN33_45160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=941bp|location=Sequence derived from alignment at NKJJ01000022.1:1869121..1870061- (Aspergillus niger FDAARGOS_311)
ATGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCA
TCGTTCCGCCGCAACTCCTGCTTCAATTCCCAACACACCTTCTGTCCGTC
CAGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGG
GCTTCACCAGCCTCTTCCCGTCAGCCCAGTACTGGCCATGTGTCGAGTCA
GCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCG
CCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAA
CAGTCCTCGACCAACAATAACAGCAATAGGAAAGGGCCCAATAAGAAGAA
TAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGA
ACTTTGCATCTGAACGTACGTCTGTCGCCGTCGATATGTAAATCGATAGC
TGGACCTATAGTTCTGGTTGCTAACATGAACCCTCACATCAGTCCGCCTC
CTCCTTCTTGCCTATGGTGACCCCCGTCCGCACCCTTCGTTTCCCGCCGA
ACCACTCCCCGAAACCATCCGTGTTCTGGACGAGATTGTCACCGACTTCG
TTCTCGAAATGTGTCACGGTGCGGCCCAGTACGCCAGCTACTCCCGCCGG
CAGAAGATCAAGGTCGATGACTTCCGGTTTGCGCTGCGCCGGGATCCCAA
CAAGCTTGGTCGTGTACAGGAACTTCTTCGCATGGAGCGTGAGCTGAAAG
AGGCTCGTAAGGCATTTGATCAGAATGACGATCAGGTCGGGAACTTGAAG
GATGCGGGCAAGAAGGGTCTTGAGGAACTTGGCGAAAGTGTTGATGGGAA
GAAGAGTAAGGGCAAGGGGAAGAGAAATGCAAGAAGGGATTCGGATGCCA
CGGAGGATACGGCGCCGAAGAAGAGAAAAGTTGTGGGATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1869121..1870061- >CAN33_45160-T1 ID=CAN33_45160-T1|Name=CAN33_45160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1728bp|location=Sequence derived from alignment at NKJJ01000022.1:1869121..1870061- (Aspergillus niger FDAARGOS_311)
TCCGCCTCCTCCTTCTTGCCTATGGTGACCCCCGTCCGCACCCTTCGTTT
CCCGCCGAACCACTCCCCGAAACCATCCGTGTTCTGGACGAGATTGTCAC
CGACTTCGTTCTCGAAATGTGTCACGGTGCGGCCCAGTACGCCAGCTACT
CCCGCCGGCAGAAGATCAAGGTCGATGACTTCCGGTTTGCGCTGCGCCGG
GATCCCAACAAGCTTGGTCGTGTACAGGAACTTCTTCGCATGGAGCGTGA
GCTGAAAGAGGCTCGTAAGGCATTTGATCAGAATGACGATCAGGTCGGGA
ACTTGAAGGATGCGGGCAAGAAGGGTCTTGAGGAACTTGGCGAAAGTGTT
GATGGGAAGAAGAGTAAGGGCAAGGGGAAGAGAAATGCAAGAAGGGATTC
GGATGCCACGGAGGATACGGCGCCGAAGAAGAGAAAAGTTGTGGGATGAA
TGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCAT
CGTTCCGCCGCAACTCCTGCTTCAATTCCCAACACACCTTCTGTCCGTCC
AGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGGG
CTTCACCAGCCTCTTCCCGTCAGCCCAGTACTGGCCATGTGTCGAGTCAG
CTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCGC
CGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAAC
AGTCCTCGACCAACAATAACAGCAATAGGAAAGGGCCCAATAAGAAGAAT
AATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGAA
CTTTGCATCTGAACTCCGCCTCCTCCTTCTTGCCTATGGTGACCCCCGTC
CGCACCCTTCGTTTCCCGCCGAACCACTCCCCGAAACCATCCGTGTTCTG
GACGAGATTGTCACCGACTTCGTTCTCGAAATGTGTCACGGTGCGGCCCA
GTACGCCAGCTACTCCCGCCGGCAGAAGATCAAGGTCGATGACTTCCGGT
TTGCGCTGCGCCGGGATCCCAACAAGCTTGGTCGTGTACAGGAACTTCTT
CGCATGGAGCGTGAGCTGAAAGAGGCTCGTAAGGCATTTGATCAGAATGA
CGATCAGGTCGGGAACTTGAAGGATGCGGGCAAGAAGGGTCTTGAGGAAC
TTGGCGAAAGTGTTGATGGGAAGAAGAGTAAGGGCAAGGGGAAGAGAAAT
GCAAGAAGGGATTCGGATGCCACGGAGGATACGGCGCCGAAGAAGAGAAA
AGTTGTGGGATGAATGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCGC
GGAAGTCCGGCCATCGTTCCGCCGCAACTCCTGCTTCAATTCCCAACACA
CCTTCTGTCCGTCCAGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGCA
GCAGACTTCTAGGGCTTCACCAGCCTCTTCCCGTCAGCCCAGTACTGGCC
ATGTGTCGAGTCAGCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACA
GAACTAATCCGCGCCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGC
CGCAGCGGACGAACAGTCCTCGACCAACAATAACAGCAATAGGAAAGGGC
CCAATAAGAAGAATAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCAC
AAGGGTCAGATGAACTTTGCATCTGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006366 | transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003195 |
| DBxref | InterPro:IPR009072 |
| DBxref | PFAM:PF02269 |
| Product | Transcription initiation factor IID 18kD subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1869121..1870061 - |
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