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CAN33_45165-T1, CAN33_45165-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45165-T1
Unique NameCAN33_45165-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1870976..1873384-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45165-T1 ID=CAN33_45165-T1|Name=CAN33_45165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2409bp|location=Sequence derived from alignment at NKJJ01000022.1:1870976..1873384- (Aspergillus niger FDAARGOS_311)
ATGTTACCTTGTCCGCACCATCTCCCGCGTTCCCGCGTCTGCGCTGGATT
GCCGTCCCATAGCCCGCAGCACAGGCTCCGCTTTGGGCGACGGAGAGAAG
GACACTACGATACAAGATCCTTTGTCGACAATGCGCCGCGATCGAATACG
TCGAGTCAGCTGGATGTTCTAACCAATGGTCTGAGGCCTTCCAGCGTCTA
CTGCACTGTTAACCCGGAAATGAAGCCCCAGCGCCTCTTCCATACAACTA
CCTTTGGCCGATCTGCAGGGAATCGTGTATTTCACAATCAGCCCTCGATT
ACCAAAAGGGAGTTCTCACTTCTGTCACCCGGAGCCGGTTCTCGCAATGC
AACTTTACTATCGATCATCAACAAACACACCACACTTTCCGTCGTGCAGA
AACGCAATTTGCGCACCCCACCTACCCTCGCGAGCTTCAGCGATGTGAAG
CCGCTCTTGACATTGCGGTTTGGAAAAGAAACCAAAGCCTTGGATTTGGC
TATTAGATCCGGATCATATATGTGCAGTGGAGATGATATTCGAAAATGGA
GATTTGCGCAAAGAGAGTTGTTTCAGGCGAAGTACGAGGAGAGAGAGGTG
CAGGAAGAGTTGGTGCCTTACCCTCTAGACTCAAAAGATAAGGAGCTGCT
GGAGGCCATTCAAACGGACAGCCTGGGAGCGTTCCGTGAGGCCTGGAATG
GCCTAACCCCGATGGAAATGGAGATCCACTGGGGGCGATTGTCGCTGTGG
CTATTACGGAATTCTCCTGAGCTGGCCTTGGAATTCCTCCTAGTCACTTG
TCAGGCTTCTGTTAAACCAGTATTTGCCATGATTGCGGACTGCCTGATCT
ATTTGGACACTCTTCATTCTGGTGAGATGCAGCGGTGGAGGAAAAATTCC
CACAACTATCAGTCTGTCATACGTATCTGCTTGGATCCCATGCAGTGGCC
TGTCTCCTATGTGCCGCAGAAGGGTGTGCGCTTCTACATAAAGAAGGCTG
ACCGTAGCGCAGTTTATGAGGCATGGAATCTTGTGGAGACTCGAAAGCAC
AGATTGAAGGGCGAGACCTACCTTGGTTTCATGGGCCGCTTCACGGAATT
CAAAGACGTTGACAACGCACTCCTGGCACTGCGCCGGGCTGGGCGGCAGT
TTTGGAGATTACATCAAAGTCCTATGGAGATAGCAGTTTCACGCCATTGC
AGCAAGCTCTTGGTTCTCGACTCGGTTGTGGATGGCCCGGATGGACGCAA
TTTCCGCATTCTTCCCGAACTCCTCAGTATGGGGGTGCAGCCTGACCGAG
ACATGATGAACGTGGTGCTCTCTAACGCCTTCAAGACAGGGGATCCTCAA
CTCGGGCTTGATGTATTGCGCCATATGAAGGCTCAAGGCTTCCAGCTCGA
TTCGTACACTTATCTGACTCTACTTAGCGATGCTGTCGCTCGTCAAGACA
GGGAGCGAATGACACACTTGATGGAGGAACTTGAAAGCCAGCCAGAGCTC
AAGAAGAACCCCTATATTGCGAGCAAGCTCTTCCACTCTCACTTCGTTTT
CAACGTCAAGCATCTCGATGGTGCTACAGACCGCCGGGAGATTTTCTACT
CACTGCTGCGCATGTATTGTGAGCTGCATGACATAACGCCCCTAAAAGAG
CTCTCGATTGTCCCTCGTCAGTACGATCTTCCAACAACTGGCGAAAAGAC
CCCACCGTCCGTCATTGCCTTGTATCTCGTGATTGCGACTTGGCTCCGGT
GTCAAGCTCACGTGGGCAGCGTCGAACGTGTTTATACCAGGTTCCGGGAA
TTGGTGTTGCAAGGCCACAAAGACGTAGCCCCTCTAGCTGCGACCGACCA
TACCTACAATGAGTTCATGCTTGCGTATCGTAACAATCCACACGGGTTAC
GGCCCGCTGTGCGCGTTGTTGAAGACATGTTACAGTCTGCCACTGAGGTT
GGCGCCAAAACTGGCAATTCTGAGTCAACTTTCACGCAGACACAGCCAAC
GGTCTTGACTTGGACGCTGCTGTTGAGTGCTTTCATCTATAACAACCAGC
CACTCGCGGCTGAGAAGGTGAGAGAGATGATGGCTAAGCATGGTGTTGTA
TACAGCATGACTACTTGGAATGTCATCATCAGCGGGTTTGCGAGCCAGCA
AAATGCATCTGCCATCGCGCAGTCCATCAAAGATCTCGAAGATCAAGGCC
TTTCCATTGATGCTTATACGATGAAGGGCCTGCGCTACCTCCGAGACCCG
GAGCAGCTCTGGATTGCGGTGGAGCAGTTGGACCTGAAATCTGCATCTCA
CTTGAGGAGGGATGCTTTCAACCAGAACCCCGAATCTCCCCACCTGGACG
AAGCGGAAACTGAGCAGCTGCTCGATCGAGGCCTGCAGCGTCTAAAGGCC
AACGCATGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1870976..1873384-

>CAN33_45165-T1 ID=CAN33_45165-T1|Name=CAN33_45165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2409bp|location=Sequence derived from alignment at NKJJ01000022.1:1870976..1873384- (Aspergillus niger FDAARGOS_311)
ATGTTACCTTGTCCGCACCATCTCCCGCGTTCCCGCGTCTGCGCTGGATT
GCCGTCCCATAGCCCGCAGCACAGGCTCCGCTTTGGGCGACGGAGAGAAG
GACACTACGATACAAGATCCTTTGTCGACAATGCGCCGCGATCGAATACG
TCGAGTCAGCTGGATGTTCTAACCAATGGTCTGAGGCCTTCCAGCGTCTA
CTGCACTGTTAACCCGGAAATGAAGCCCCAGCGCCTCTTCCATACAACTA
CCTTTGGCCGATCTGCAGGGAATCGTGTATTTCACAATCAGCCCTCGATT
ACCAAAAGGGAGTTCTCACTTCTGTCACCCGGAGCCGGTTCTCGCAATGC
AACTTTACTATCGATCATCAACAAACACACCACACTTTCCGTCGTGCAGA
AACGCAATTTGCGCACCCCACCTACCCTCGCGAGCTTCAGCGATGTGAAG
CCGCTCTTGACATTGCGGTTTGGAAAAGAAACCAAAGCCTTGGATTTGGC
TATTAGATCCGGATCATATATGTGCAGTGGAGATGATATTCGAAAATGGA
GATTTGCGCAAAGAGAGTTGTTTCAGGCGAAGTACGAGGAGAGAGAGGTG
CAGGAAGAGTTGGTGCCTTACCCTCTAGACTCAAAAGATAAGGAGCTGCT
GGAGGCCATTCAAACGGACAGCCTGGGAGCGTTCCGTGAGGCCTGGAATG
GCCTAACCCCGATGGAAATGGAGATCCACTGGGGGCGATTGTCGCTGTGG
CTATTACGGAATTCTCCTGAGCTGGCCTTGGAATTCCTCCTAGTCACTTG
TCAGGCTTCTGTTAAACCAGTATTTGCCATGATTGCGGACTGCCTGATCT
ATTTGGACACTCTTCATTCTGGTGAGATGCAGCGGTGGAGGAAAAATTCC
CACAACTATCAGTCTGTCATACGTATCTGCTTGGATCCCATGCAGTGGCC
TGTCTCCTATGTGCCGCAGAAGGGTGTGCGCTTCTACATAAAGAAGGCTG
ACCGTAGCGCAGTTTATGAGGCATGGAATCTTGTGGAGACTCGAAAGCAC
AGATTGAAGGGCGAGACCTACCTTGGTTTCATGGGCCGCTTCACGGAATT
CAAAGACGTTGACAACGCACTCCTGGCACTGCGCCGGGCTGGGCGGCAGT
TTTGGAGATTACATCAAAGTCCTATGGAGATAGCAGTTTCACGCCATTGC
AGCAAGCTCTTGGTTCTCGACTCGGTTGTGGATGGCCCGGATGGACGCAA
TTTCCGCATTCTTCCCGAACTCCTCAGTATGGGGGTGCAGCCTGACCGAG
ACATGATGAACGTGGTGCTCTCTAACGCCTTCAAGACAGGGGATCCTCAA
CTCGGGCTTGATGTATTGCGCCATATGAAGGCTCAAGGCTTCCAGCTCGA
TTCGTACACTTATCTGACTCTACTTAGCGATGCTGTCGCTCGTCAAGACA
GGGAGCGAATGACACACTTGATGGAGGAACTTGAAAGCCAGCCAGAGCTC
AAGAAGAACCCCTATATTGCGAGCAAGCTCTTCCACTCTCACTTCGTTTT
CAACGTCAAGCATCTCGATGGTGCTACAGACCGCCGGGAGATTTTCTACT
CACTGCTGCGCATGTATTGTGAGCTGCATGACATAACGCCCCTAAAAGAG
CTCTCGATTGTCCCTCGTCAGTACGATCTTCCAACAACTGGCGAAAAGAC
CCCACCGTCCGTCATTGCCTTGTATCTCGTGATTGCGACTTGGCTCCGGT
GTCAAGCTCACGTGGGCAGCGTCGAACGTGTTTATACCAGGTTCCGGGAA
TTGGTGTTGCAAGGCCACAAAGACGTAGCCCCTCTAGCTGCGACCGACCA
TACCTACAATGAGTTCATGCTTGCGTATCGTAACAATCCACACGGGTTAC
GGCCCGCTGTGCGCGTTGTTGAAGACATGTTACAGTCTGCCACTGAGGTT
GGCGCCAAAACTGGCAATTCTGAGTCAACTTTCACGCAGACACAGCCAAC
GGTCTTGACTTGGACGCTGCTGTTGAGTGCTTTCATCTATAACAACCAGC
CACTCGCGGCTGAGAAGGTGAGAGAGATGATGGCTAAGCATGGTGTTGTA
TACAGCATGACTACTTGGAATGTCATCATCAGCGGGTTTGCGAGCCAGCA
AAATGCATCTGCCATCGCGCAGTCCATCAAAGATCTCGAAGATCAAGGCC
TTTCCATTGATGCTTATACGATGAAGGGCCTGCGCTACCTCCGAGACCCG
GAGCAGCTCTGGATTGCGGTGGAGCAGTTGGACCTGAAATCTGCATCTCA
CTTGAGGAGGGATGCTTTCAACCAGAACCCCGAATCTCCCCACCTGGACG
AAGCGGAAACTGAGCAGCTGCTCGATCGAGGCCTGCAGCGTCTAAAGGCC
AACGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45165CAN33_45165Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45165-T1.cdsCAN33_45165-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45165-T1.exon1CAN33_45165-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45165-T1CAN33_45165-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR002885
DBxrefPFAM:PF13812
DBxrefPFAM:PF01535
ProductPentatricopeptide repeat domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1870976..1873384 -
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