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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1879943..1880623- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45185-T1 ID=CAN33_45185-T1|Name=CAN33_45185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=681bp|location=Sequence derived from alignment at NKJJ01000022.1:1879943..1880623- (Aspergillus niger FDAARGOS_311)
ATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCTCA
CAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAAT
CCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAG
AAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGC
ATTGTCGACGTTTTATGTATGACGCAGTCCTTATCTTCTCTTTCTCAAAC
ACATACATACATACCGTGGAGGACATACGATAGAGGAAAGCGAACATTTT
CAACTAACCAAGGAATAATAGACCCCCCACGAACTCCTCCCCAAACTCTT
CGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACACGCGAG
TTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAATCCTG
GAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCGCGGAC
GGTTGCTAGACAGCGGTCTCAGGGCTTGGAGACCCTCAATGAACTCACTA
CGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTGCTGAT
CTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAGGAGGA
CGCGGGGAAGGCGAAGCCTGCGAAGCAATAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1879943..1880623- >CAN33_45185-T1 ID=CAN33_45185-T1|Name=CAN33_45185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1152bp|location=Sequence derived from alignment at NKJJ01000022.1:1879943..1880623- (Aspergillus niger FDAARGOS_311)
ACCCCCCACGAACTCCTCCCCAAACTCTTCGGTCCTCTTCGTGAACGCTA
CGCCGAACGCCCCGGTGGCTACACGCGAGTTCTGCGCGTCGAACCCAAGA
AGGACGATCAAGCCGCCAGCGCAATCCTGGAGTTGGTAGATGGACCTAAA
GATATGCGGTTTGCTTTGACGGCGCGGACGGTTGCTAGACAGCGGTCTCA
GGGCTTGGAGACCCTCAATGAACTCACTACGATGAATGTCAATAAGGTCA
CACGGTTCCGGAAAGGAGGGATTGCTGATCTGGAGAGGGAGATCAAGCGG
TTAGAGATCACGGGTCACGGGAAGGAGGACGCGGGGAAGGCGAAGCCTGC
GAAGCAATAAATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCA
AGTCCTCTCACAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTC
CAGCATGAATCCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACG
ACTGGCCGAGAAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTC
GGAAACGCGCATTGTCGACGTTTTATACCCCCCACGAACTCCTCCCCAAA
CTCTTCGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACAC
GCGAGTTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAA
TCCTGGAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCG
CGGACGGTTGCTAGACAGCGGTCTCAGGGCTTGGAGACCCTCAATGAACT
CACTACGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTG
CTGATCTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAG
GAGGACGCGGGGAAGGCGAAGCCTGCGAAGCAATAAATGGCCGGAGGTGC
TACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCTCACAGACAGGCTCTGC
TCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAATCCATCACAACCACA
TGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAGAAGTTGATCACCCT
GGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGCATTGTCGACGTTTT
AT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264MZ1 |
| DBxref | InterPro:IPR036373 |
| DBxref | InterPro:IPR000456 |
| DBxref | PFAM:PF01196 |
| Product | ribosomal protein L17 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1879943..1880623 - |
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