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CAN33_45230-T1, CAN33_45230-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45230-T1
Unique NameCAN33_45230-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1895759..1896588+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45230-T1 ID=CAN33_45230-T1|Name=CAN33_45230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=830bp|location=Sequence derived from alignment at NKJJ01000022.1:1895759..1896588+ (Aspergillus niger FDAARGOS_311)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGTACGTTTTGACTGCTTGCGCTGAAAACCCA
AAGCTTGATGCTTTCTTTTGCTTGTTTCTTGGCTTGCTTCTATTTGACTT
GGCGATTTGTCTTTCACTGAATCTAGCTAACGTGACCTTCTTTTTTCATG
ACTTATAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGAA
TCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAATC
GGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTCG
TCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTTT
CAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCAC
CGGCCAGCCCAAGGGGTATGTTGCAGCGCATTCATTTGACAGGCTGGGGG
CATCATATGCTGATATGATTTACAGATACGCCTATGTAGAATTTGCGGAA
CCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCGG
CCGGAACCTGAAGGTAGATCGCATGATAGAGGCCATTGATCGACTGAATG
ATACTAATGCTCGATGCTTTACAGGTCGTTCCCAAGCGTACCAACCTGCC
GGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGG
GGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGT
GGCCGGGGTCGCGGCTATGCGCCCTACTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1895759..1896588+

>CAN33_45230-T1 ID=CAN33_45230-T1|Name=CAN33_45230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2280bp|location=Sequence derived from alignment at NKJJ01000022.1:1895759..1896588+ (Aspergillus niger FDAARGOS_311)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAG
CCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTT
GATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCG
GAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTC
AGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTG
GACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGTCGTTCCCAAGCGTACCAACCTGCCGGGCATGAGC
CGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGG
TGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTC
GCGGCTATGCGCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGAT
GAGCGCCTGCAACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGC
GGCGATGAAGAAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTAC
GCGAGATGCAAGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGAC
AAAGAGGAGATCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGG
TGCCTCTCCCGAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAA
ACCGTGTCACTATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATAC
GCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTT
GAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCCAAGCGTA
CCAACCTGCCGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGT
GGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGG
TGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCCTACTAAATGGCTACGG
AAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGAGGAGGCCGGT
GATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGA
ATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAAT
CGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTC
GTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTT
TCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCA
CCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGAACCCAGTTTA
GTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCGGCCGGAACCT
GAAGGTCGTTCCCAAGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTG
GACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCG
CCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGC
GCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGC
AACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAG
AAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCA
AGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGA
TCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCC
GAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCAC
TATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAG
AATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGT
GTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCCAAGCGTACCAACCTGCC
GGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGG
GGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGT
GGCCGGGGTCGCGGCTATGCGCCCTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45230CAN33_45230Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45230-T1.exon1CAN33_45230-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45230-T1.exon2CAN33_45230-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45230-T1.exon3CAN33_45230-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45230-T1.exon4CAN33_45230-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45230-T1.cdsCAN33_45230-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45230-T1CAN33_45230-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1895759..1896588 +
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