|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1922848..1923584+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45280-T1 ID=CAN33_45280-T1|Name=CAN33_45280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=737bp|location=Sequence derived from alignment at NKJJ01000022.1:1922848..1923584+ (Aspergillus niger FDAARGOS_311)
ATGGCTGTCGACGCTGCTACCCCCTCTTCGGTGTGTCACCACCATCCCCG
TGCAATGATCGTACCTGGATAGCCCGCAATCCGAACGTCATCCGACTCCT
CTCGCGTACCTATCCAGACGGACTACTCGTGACAATATACTTACTTTTCG
ACTCGCATAGCCCGTTCCGATCCCCGAATTGACCAAGATCGCCACCGAGG
TGCGTTCACTCATACCCTCACTTCCACCGACAAAGTACAACTACACCTTC
TTTACCCCAGCTAACCACCGACCCCTCACCCCAATATAGGCCTGCGACAC
TGCCCTCAAAGAAGTGACCGAATACGAACACACCAAAGTCGGCGACTGGA
ACTCCCAAATTATTGTATCTACCCCACAACAACAACAACAACAACAACAA
CAACAACAACAACCCCTCCTTGATCAAGCTAACCACTAAATCAAATCCAA
CAGAACACTATCCTGAAAGCCCTCATCACCGCCACCGCCCCTCCACCCCC
TCGACTGCCCCTCCTTACCGCTTCACCGTGAACAGCACCATCGTGCAACA
AGGCCTCATCGACAAGTCCGCTGCCGCTGACGGCGCGACCAGCAACACCG
GCAAGCGCGGGATGCACTCTGCGTCTGGTGCTTTCTGGGATGTGAACCGC
GATGGTATGTGGACGTTCAAGTATCCGGGTGCTGAGGAACGGGGTCTGGA
TGTTGTTGTTAGTGTGACGTGGTTTGCGCTGGGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1922848..1923584+ >CAN33_45280-T1 ID=CAN33_45280-T1|Name=CAN33_45280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1812bp|location=Sequence derived from alignment at NKJJ01000022.1:1922848..1923584+ (Aspergillus niger FDAARGOS_311)
ATGGCTGTCGACGCTGCTACCCCCTCTTCGCCCGTTCCGATCCCCGAATT
GACCAAGATCGCCACCGAGGCCTGCGACACTGCCCTCAAAGAAGTGACCG
AATACGAACACACCAAAGTCGGCGACTGGAACTCCCAAATTATTCTAACC
ACTAAATCAAATCCAACAGAACACTATCCTGAAAGCCCTCATCACCGCCA
CCGCCCCTCCACCCCCTCGACTGCCCCTCCTTACCGCTTCACCGTGAACA
GCACCATCGTGCAACAAGGCCTCATCGACAAGTCCGCTGCCGCTGACGGC
GCGACCAGCAACACCGGCAAGCGCGGGATGCACTCTGCGTCTGGTGCTTT
CTGGGATGTGAACCGCGATGGTATGTGGACGTTCAAGTATCCGGGTGCTG
AGGAACGGGGTCTGGATGTTGTTGTTAGTGTGACGTGGTTTGCGCTGGGT
TAGATGGCTGTCGACGCTGCTACCCCCTCTTCGCCCGTTCCGATCCCCGA
ATTGACCAAGATCGCCACCGAGGCCTGCGACACTGCCCTCAAAGAAGTGA
CCGAATACGAACACACCAAAGTCGGCGACTGGAACTCCCAAATTATTCTA
ACCACTAAATCAAATCCAACAGAACACTATCCTGAAAGCCCTCATCACCG
CCACCGCCCCTCCACCCCCTCGACTGCCCCTCCTTACCGCTTCACCGTGA
ACAGCACCATCGTGCAACAAGGCCTCATCGACAAGTCCGCTGCCGCTGAC
GGCGCGACCAGCAACACCGGCAAGCGCGGGATGCACTCTGCGTCTGGTGC
TTTCTGGGATGTGAACCGCGATGGTATGTGGACGTTCAAGTATCCGGGTG
CTGAGGAACGGGGTCTGGATGTTGTTGTTAGTGTGACGTGGTTTGCGCTG
GGTTAGATGGCTGTCGACGCTGCTACCCCCTCTTCGCCCGTTCCGATCCC
CGAATTGACCAAGATCGCCACCGAGGCCTGCGACACTGCCCTCAAAGAAG
TGACCGAATACGAACACACCAAAGTCGGCGACTGGAACTCCCAAATTATT
CTAACCACTAAATCAAATCCAACAGAACACTATCCTGAAAGCCCTCATCA
CCGCCACCGCCCCTCCACCCCCTCGACTGCCCCTCCTTACCGCTTCACCG
TGAACAGCACCATCGTGCAACAAGGCCTCATCGACAAGTCCGCTGCCGCT
GACGGCGCGACCAGCAACACCGGCAAGCGCGGGATGCACTCTGCGTCTGG
TGCTTTCTGGGATGTGAACCGCGATGGTATGTGGACGTTCAAGTATCCGG
GTGCTGAGGAACGGGGTCTGGATGTTGTTGTTAGTGTGACGTGGTTTGCG
CTGGGTTAGATGGCTGTCGACGCTGCTACCCCCTCTTCGCCCGTTCCGAT
CCCCGAATTGACCAAGATCGCCACCGAGGCCTGCGACACTGCCCTCAAAG
AAGTGACCGAATACGAACACACCAAAGTCGGCGACTGGAACTCCCAAATT
ATTCTAACCACTAAATCAAATCCAACAGAACACTATCCTGAAAGCCCTCA
TCACCGCCACCGCCCCTCCACCCCCTCGACTGCCCCTCCTTACCGCTTCA
CCGTGAACAGCACCATCGTGCAACAAGGCCTCATCGACAAGTCCGCTGCC
GCTGACGGCGCGACCAGCAACACCGGCAAGCGCGGGATGCACTCTGCGTC
TGGTGCTTTCTGGGATGTGAACCGCGATGGTATGTGGACGTTCAAGTATC
CGGGTGCTGAGGAACGGGGTCTGGATGTTGTTGTTAGTGTGACGTGGTTT
GCGCTGGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR005334 |
| DBxref | InterPro:IPR038586 |
| DBxref | PFAM:PF03645 |
| Product | Tctex-1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1922848..1923584 + |
|
