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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2018338..2021454- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45430-T1 ID=CAN33_45430-T1|Name=CAN33_45430-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3117bp|location=Sequence derived from alignment at NKJJ01000022.1:2018338..2021454- (Aspergillus niger FDAARGOS_311)
ATGGTGCAGCAGGACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGA
GGCTGCCAGCAGGAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGT
GCAAGAAATCTACCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCAT
TCGTGGAAGTTCATGGACTGGGATTATAAACGCGACGATCTGCCGACCTA
TGCGCGAGGGCTGTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTG
CGGTTCGCGGATACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACA
AAGTGGAGGAACATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGT
GAAGGAGAACGGATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCT
TGTTGGTCTGCAGCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTC
AGCCATGCTCAAGCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGT
TGGAAGAAATGTAAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCA
CCGCAGTAGGCGAGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCT
TACGACGAAAGCGCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGT
GCCCCAATTTGCCACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATG
CATGGGGATTTAAGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAG
GTCAAGAAATTCCTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCG
GGAGACCGAGGGGTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTC
CCCCCTACCGGGATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTG
ATGTACAGGCAATGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGT
TCCTAACATCAAGAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACG
CGCGAAGACAGCTCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAA
AACCACGGCATCATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCT
CAACGGATCTGAGATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGA
CGCACGACGTAATTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACG
ACAGTGGCTTTGGCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAA
CGATAACATTCCGAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACA
TTACAAACCTCCTTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAAC
CACATGCGACGCGAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAAT
TTCCAAAGCTCGCTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGAC
AATTACTTCCTGGCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGT
GGAGACAACCACCAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGT
CATCGGAATCATGGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCG
ACCGTGAGCCAGACTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGT
GCTTCTTCCCGGGAGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATT
CTATCCCAAGCTCGTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACG
CCATCTACTGGTCGATGAACGAATACCAAGTGCAGCTGGATTGGAGCCAT
CAATACGGATCCCAGAAACCGAAGAACAAGAACAAGAACCAGAATCAGAA
CCCCGGCAGCCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCA
AGAAGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAAT
ATCCTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCT
CTACAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGA
CGTTGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAA
TACGTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCC
CACCATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTA
TATGGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGAT
GATCAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCAC
TGTGGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGT
TGAAGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAA
GCCGAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGGTGTGGTGAT
GAGTCGAGGCAAATAAGTTAATGACTGATGACGACGAGTCATGAGTGATG
ATTGCAAAGGAAAAGTACATAGTTAGTTACCATAGACATGAAAGTCGCCT
AGTTTGGCACCATGCAAGTGTTCTCGCTCTATTGTAAAAGACATTGTTTC
AAGTAAAAGTAGTGACAGACAATCGCAGAGGGGTGGTCAAAAGCAGACAA
ACAATCAAGGGCTATTTAAATAGTCATGATTTTCCCTTCACACTTGAATC
ATCTTAGATGACTGTAGTTTCACTTGATTTGATTGTCTTGTGGAATCCTG
GGAGACCGAAAGTTATAGTTCGCTTCGATATATTCTTTTCATGAGACGTT
CATCGCCCCGTTCGCTCCGAGTAGCCAGCGACATATCGCTTTGGCCTACA
CTTCGCAACAACTGCGCTGCATTTGGACTTTTCTTGTGACAAAGGCAGAT
CTCTAGAATCTGGTCATGTCCTGCCTTCTAACCTTTTGAACTTAAGTACT
TGGTCAATACTCAAATTGCTTTCTCAAATGATGTATTCACTCTAAATGGC
TTTTCCATTTCCATGAAGAAATTTATATTCGAATATAGACAGACAACTGT
AACTATATGCAACCAATCTGTCTTTATGTGATATTGTACTCACAACTCAA
GATATCTAGTATTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2018338..2021454- >CAN33_45430-T1 ID=CAN33_45430-T1|Name=CAN33_45430-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7047bp|location=Sequence derived from alignment at NKJJ01000022.1:2018338..2021454- (Aspergillus niger FDAARGOS_311)
TATTCTAACCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCAA
GAAGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAATA
TCCTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCTC
TACAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGAC
GTTGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAAT
ACGTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCCC
ACCATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTAT
ATGGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGATG
ATCAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCACT
GTGGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGTT
GAAGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAAG
CCGAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGATGGTGCAGCA
GGACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGAGGCTGCCAGCA
GGAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGTGCAAGAAATCT
ACCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCATTCGTGGAAGTT
CATGGACTGGGATTATAAACGCGACGATCTGCCGACCTATGCGCGAGGGC
TGTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTGCGGTTCGCGGA
TACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACAAAGTGGAGGAA
CATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGTGAAGGAGAACG
GATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCTTGTTGGTCTGC
AGCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTCAGCCATGCTCA
AGCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGTTGGAAGAAATG
TAAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCACCGCAGTAGGC
GAGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCTTACGACGAAAG
CGCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGTGCCCCAATTTG
CCACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATGCATGGGGATTT
AAGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAGGTCAAGAAATT
CCTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCGGGAGACCGAGG
GGTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTCCCCCCTACCGG
GATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTGATGTACAGGCA
ATGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGTTCCTAACATCA
AGAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACGCGCGAAGACAG
CTCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAAAACCACGGCAT
CATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCTCAACGGATCTG
AGATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGACGCACGACGTA
ATTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACGACAGTGGCTTT
GGCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAACGATAACATTC
CGAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACATTACAAACCTC
CTTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAACCACATGCGACG
CGAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAATTTCCAAAGCTC
GCTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGACAATTACTTCCT
GGCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGTGGAGACAACCA
CCAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGTCATCGGAATCA
TGGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCGACCGTGAGCCA
GACTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGTGCTTCTTCCCG
GGAGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATTCTATCCCAAGC
TCGTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACGCCATCTACTGT
ATTCTAACCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCAAG
AAGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAATAT
CCTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCTCT
ACAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGACG
TTGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAATA
CGTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCCCA
CCATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTATA
TGGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGATGA
TCAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCACTG
TGGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGTTG
AAGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAAGC
CGAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGATGGTGCAGCAG
GACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGAGGCTGCCAGCAG
GAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGTGCAAGAAATCTA
CCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCATTCGTGGAAGTTC
ATGGACTGGGATTATAAACGCGACGATCTGCCGACCTATGCGCGAGGGCT
GTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTGCGGTTCGCGGAT
ACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACAAAGTGGAGGAAC
ATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGTGAAGGAGAACGG
ATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCTTGTTGGTCTGCA
GCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTCAGCCATGCTCAA
GCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGTTGGAAGAAATGT
AAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCACCGCAGTAGGCG
AGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCTTACGACGAAAGC
GCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGTGCCCCAATTTGC
CACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATGCATGGGGATTTA
AGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAGGTCAAGAAATTC
CTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCGGGAGACCGAGGG
GTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTCCCCCCTACCGGG
ATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTGATGTACAGGCAA
TGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGTTCCTAACATCAA
GAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACGCGCGAAGACAGC
TCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAAAACCACGGCATC
ATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCTCAACGGATCTGA
GATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGACGCACGACGTAA
TTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACGACAGTGGCTTTG
GCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAACGATAACATTCC
GAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACATTACAAACCTCC
TTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAACCACATGCGACGC
GAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAATTTCCAAAGCTCG
CTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGACAATTACTTCCTG
GCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGTGGAGACAACCAC
CAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGTCATCGGAATCAT
GGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCGACCGTGAGCCAG
ACTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGTGCTTCTTCCCGG
GAGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATTCTATCCCAAGCT
CGTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACGCCATCTACTGTA
TTCTAACCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCAAGA
AGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAATATC
CTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCTCTA
CAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGACGT
TGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAATAC
GTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCCCAC
CATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTATAT
GGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGATGAT
CAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCACTGT
GGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGTTGA
AGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAAGCC
GAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGATGGTGCAGCAGG
ACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGAGGCTGCCAGCAGG
AAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGTGCAAGAAATCTAC
CTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCATTCGTGGAAGTTCA
TGGACTGGGATTATAAACGCGACGATCTGCCGACCTATGCGCGAGGGCTG
TTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTGCGGTTCGCGGATA
CGACAAGTTCTTCAACGTGGACGAGGTGAATGACACAAAGTGGAGGAACA
TCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGTGAAGGAGAACGGA
TGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCTTGTTGGTCTGCAG
CAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTCAGCCATGCTCAAG
CTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGTTGGAAGAAATGTA
AAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCACCGCAGTAGGCGA
GCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCTTACGACGAAAGCG
CTTCGGGCATCTATCTGCATGGACTCAACTTCAACGTGCCCCAATTTGCC
ACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATGCATGGGGATTTAA
GAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAGGTCAAGAAATTCC
TCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCGGGAGACCGAGGGG
TTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTCCCCCCTACCGGGA
TTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTGATGTACAGGCAAT
GGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGTTCCTAACATCAAG
AAGCACAAGAAGATCACTGAGGAGTATCTCCATTACGCGCGAAGACAGCT
CGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAAAACCACGGCATCA
TTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCTCAACGGATCTGAG
ATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGACGCACGACGTAAT
TCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACGACAGTGGCTTTGG
CTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAACGATAACATTCCG
AAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACATTACAAACCTCCT
TGCCCAACATCCTGTGGTGATAGCAGACCGGAACAACCACATGCGACGCG
AACGGCAGCAACTTATAGACGATGTGTCGGTTGTAATTTCCAAAGCTCGC
TATGTCGCACTCCAGTACGTCCACGAACCTAAAGGACAATTACTTCCTGG
CATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGTGGAGACAACCACC
AGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGTCATCGGAATCATG
GAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCGACCGTGAGCCAGA
CTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGTGCTTCTTCCCGGG
AGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATTCTATCCCAAGCTC
GTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACGCCATCTACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003972 | RNA ligase (ATP) activity |
| GO:0008081 | phosphoric diester hydrolase activity |
| GO:0005524 | ATP binding |
| GO:0051730 | GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261IBJ |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR015966 |
| DBxref | InterPro:IPR019039 |
| DBxref | InterPro:IPR015965 |
| DBxref | InterPro:IPR012387 |
| DBxref | PFAM:PF08303 |
| DBxref | PFAM:PF09511 |
| Product | Fungal tRNA ligase phosphodiesterase domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2018338..2021454 - |
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