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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2040495..2042750+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45470-T1 ID=CAN33_45470-T1|Name=CAN33_45470-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2256bp|location=Sequence derived from alignment at NKJJ01000022.1:2040495..2042750+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCTTCATTTTCCTACGCTCAAGCAGCAAAGGGCATTGCCCCCGC
GCAGTCCCCAGCAAAAACATCACCGGAAGAGCAGACCCAAGCGGGTTCGA
AGCCGGAGGAGCAGAGTGTGGACTCTAGCTCGCAGACGAATGCAGATGCC
GTGCCTTCCAAGGCCGAAACAGCCCAGGAAACCGAGGTGACCCACACTAT
CGAGAAGGAAGTCGATTCTACAGCTACCAAGGCCAACGCTTCTGAAGCAT
CGAGTGATGGCAACTCTTCCACGTCATCTGTCCCCAAGGATGAGGACGGA
ACAGATACTCCCAACGGTACTTCGGAATCTACTTGGGACAACAAGTCCCA
AGCCTCGGGTACCGAGAAGACGAATACTGGAGCAGACAGCACGAAGGACA
AGAACGCTGAGAAGGAAAAGGCTGTGCCTGCTAAGGAACTGAAGGCTGCC
CCGCTCCCTTCCGTGAACATTTGGCAGCAGCGGAAAGAGGCGCAGGAGGC
CAAGGCCAAGGCCGTTGCCGCATTGAAGCCTGCCTCCAAGACGGGCACCT
CGAAGACTGCATCTGCCGCTTCCTCAGTGTCTGGTGATCACCAAGCCGAG
TCGAAACCGGCCTCCAAGAAGAAGGGATCTGACGTTCCTTCGGATGGCGC
CAAGGACCGGAAGAAGGCTGACGGAAATAAGGCACGTGATGACGGCGCCA
GCATCCCTCCTGTTGGAGACGAGAGCCTCTGGCCCACACCCCAGGTTGCT
CAGGGTGAAGAGAAGAAGAAGGCTCAGGAGAAGTCCGAGAAGACTGAGAA
GAGCCCTGTCATCCGCCCTCACGGCAAGGAGAAGTGGATGCCCGTTCCTT
ACGTTCCTACCGCTGTGTTCAACACCCCTCTTCCCTCTGCTCGTAGAGGC
GGAAGGGCTGCCCGCGGTGGACGCGAAAACTCCCGCAACGGAACACATGG
TGCTGGAGCCGGTGCTGATAAGGCTTCCGGCCAGGCTGCGCAGGGCTCTA
CGCCAAAGCAGGCCACCTCTGCTGACAGAGGAAGAAACGAGCAGAACTCC
GGTCGCGCCAACTCGCTTCCCGCCCAGTCAAGGCGCTCTAACAGCGCTGA
CGCTGGACTGCCAGATGCGCGTAAACACCAGGCAGCGGACCGCAACCGCG
GGCCCAAGGGAGAGAATGCAAATGGAGCACCGGCCGGAAGAAACGCCAAC
GGGGCGGACACTTACCCCCGCCACCATGCCAAGCAGTTCGCGAAGGGCCA
TGATGCAGGCCACAAGGGTGGCGAGCATGGCGCTCGTAACCCTCAGCTTT
CTGTGGATGCCCAGGCTGGTCCTCGCCAGGACCGTCGCTTCGAGAATGGC
CCCAAGTCGGCAGATTTCGCTAGCTTCCACGCCGATCGCGAGCGCAAGGA
GAAGGACTTCCCTCGTGAGTCGCGCCCCGAACGGGGACGAGGCGGACATC
GGGGAGGCCGTGGAGGCCATGCTGGCTTCAACGGTGCTCAGAACGCTCAC
TTCCCCAACAACCACATGTCGCACCACAATTTCATGCACCCCAAGTTTGG
CTTCAACGATCGCCAGAGGTCGCAACAACATGGCCCTGTCAATGGTTCTG
GAGGACACAGAATGAACATCAGGTCGCCTTCCCTGCCGAATTCCACTGCC
ATGTATGGTGTCTACCCCTACCCTGGTGATATCAACACGATGTATGGCTA
CCAGCCCATGCATGCTGGGCCGATGACCGCATATCCCTATGGCCAGTACT
ACGACCCTTACTCCCAGATTGGCATGATCTCGATGCAGGTCGAGTACTAC
TTCTCCGTGGATAACTTGTGCAAGGATCTTTTCCTCCGCAAACATATGGA
CTCCCAGGGCTATGTTGGGCTGGCTTTCATTGCTAGCTTCAAGCGCGTCA
AGAGCTTGACCGAAGACTTCGAGCTTTTGCGCCATGTTGCTCGCCAGCTG
AGGAGCGTCGAGTATGTTCAAGCTGAAGATGGGCTGGACCGTCTGCGGCC
GAGAGAGAAGTGGGAGCAATGGGTTCTCCCTATGGACCAGCGTGACCCTT
CTGCCCAGAATGACGGTCCTTCTCCTAGCAGTTCTGCGAAGCCTGAAGAC
GTCTACGTTGATGGGGCTGTCAATGGACAAGTTCTTAACGGTACCGCTGA
TTTCCACGGTCCCAAGACGTCGCTATCGTCTACTGCTCCGGAGTTTTCGC
CTGCTGGCACTCAGAATGGCCAAACTGAAATCACAAATGTACGAAATCCC
CTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2040495..2042750+ >CAN33_45470-T1 ID=CAN33_45470-T1|Name=CAN33_45470-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2256bp|location=Sequence derived from alignment at NKJJ01000022.1:2040495..2042750+ (Aspergillus niger FDAARGOS_311)
ATGGCCGCTTCATTTTCCTACGCTCAAGCAGCAAAGGGCATTGCCCCCGC
GCAGTCCCCAGCAAAAACATCACCGGAAGAGCAGACCCAAGCGGGTTCGA
AGCCGGAGGAGCAGAGTGTGGACTCTAGCTCGCAGACGAATGCAGATGCC
GTGCCTTCCAAGGCCGAAACAGCCCAGGAAACCGAGGTGACCCACACTAT
CGAGAAGGAAGTCGATTCTACAGCTACCAAGGCCAACGCTTCTGAAGCAT
CGAGTGATGGCAACTCTTCCACGTCATCTGTCCCCAAGGATGAGGACGGA
ACAGATACTCCCAACGGTACTTCGGAATCTACTTGGGACAACAAGTCCCA
AGCCTCGGGTACCGAGAAGACGAATACTGGAGCAGACAGCACGAAGGACA
AGAACGCTGAGAAGGAAAAGGCTGTGCCTGCTAAGGAACTGAAGGCTGCC
CCGCTCCCTTCCGTGAACATTTGGCAGCAGCGGAAAGAGGCGCAGGAGGC
CAAGGCCAAGGCCGTTGCCGCATTGAAGCCTGCCTCCAAGACGGGCACCT
CGAAGACTGCATCTGCCGCTTCCTCAGTGTCTGGTGATCACCAAGCCGAG
TCGAAACCGGCCTCCAAGAAGAAGGGATCTGACGTTCCTTCGGATGGCGC
CAAGGACCGGAAGAAGGCTGACGGAAATAAGGCACGTGATGACGGCGCCA
GCATCCCTCCTGTTGGAGACGAGAGCCTCTGGCCCACACCCCAGGTTGCT
CAGGGTGAAGAGAAGAAGAAGGCTCAGGAGAAGTCCGAGAAGACTGAGAA
GAGCCCTGTCATCCGCCCTCACGGCAAGGAGAAGTGGATGCCCGTTCCTT
ACGTTCCTACCGCTGTGTTCAACACCCCTCTTCCCTCTGCTCGTAGAGGC
GGAAGGGCTGCCCGCGGTGGACGCGAAAACTCCCGCAACGGAACACATGG
TGCTGGAGCCGGTGCTGATAAGGCTTCCGGCCAGGCTGCGCAGGGCTCTA
CGCCAAAGCAGGCCACCTCTGCTGACAGAGGAAGAAACGAGCAGAACTCC
GGTCGCGCCAACTCGCTTCCCGCCCAGTCAAGGCGCTCTAACAGCGCTGA
CGCTGGACTGCCAGATGCGCGTAAACACCAGGCAGCGGACCGCAACCGCG
GGCCCAAGGGAGAGAATGCAAATGGAGCACCGGCCGGAAGAAACGCCAAC
GGGGCGGACACTTACCCCCGCCACCATGCCAAGCAGTTCGCGAAGGGCCA
TGATGCAGGCCACAAGGGTGGCGAGCATGGCGCTCGTAACCCTCAGCTTT
CTGTGGATGCCCAGGCTGGTCCTCGCCAGGACCGTCGCTTCGAGAATGGC
CCCAAGTCGGCAGATTTCGCTAGCTTCCACGCCGATCGCGAGCGCAAGGA
GAAGGACTTCCCTCGTGAGTCGCGCCCCGAACGGGGACGAGGCGGACATC
GGGGAGGCCGTGGAGGCCATGCTGGCTTCAACGGTGCTCAGAACGCTCAC
TTCCCCAACAACCACATGTCGCACCACAATTTCATGCACCCCAAGTTTGG
CTTCAACGATCGCCAGAGGTCGCAACAACATGGCCCTGTCAATGGTTCTG
GAGGACACAGAATGAACATCAGGTCGCCTTCCCTGCCGAATTCCACTGCC
ATGTATGGTGTCTACCCCTACCCTGGTGATATCAACACGATGTATGGCTA
CCAGCCCATGCATGCTGGGCCGATGACCGCATATCCCTATGGCCAGTACT
ACGACCCTTACTCCCAGATTGGCATGATCTCGATGCAGGTCGAGTACTAC
TTCTCCGTGGATAACTTGTGCAAGGATCTTTTCCTCCGCAAACATATGGA
CTCCCAGGGCTATGTTGGGCTGGCTTTCATTGCTAGCTTCAAGCGCGTCA
AGAGCTTGACCGAAGACTTCGAGCTTTTGCGCCATGTTGCTCGCCAGCTG
AGGAGCGTCGAGTATGTTCAAGCTGAAGATGGGCTGGACCGTCTGCGGCC
GAGAGAGAAGTGGGAGCAATGGGTTCTCCCTATGGACCAGCGTGACCCTT
CTGCCCAGAATGACGGTCCTTCTCCTAGCAGTTCTGCGAAGCCTGAAGAC
GTCTACGTTGATGGGGCTGTCAATGGACAAGTTCTTAACGGTACCGCTGA
TTTCCACGGTCCCAAGACGTCGCTATCGTCTACTGCTCCGGAGTTTTCGC
CTGCTGGCACTCAGAATGGCCAAACTGAAATCACAAATGTACGAAATCCC
CTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR006630 |
| DBxref | PFAM:PF05383 |
| Product | La domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2040495..2042750 + |
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