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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:512916..514827- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4555-T1 ID=CAN33_4555-T1|Name=CAN33_4555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1912bp|location=Sequence derived from alignment at NKJJ01000019.1:512916..514827- (Aspergillus niger FDAARGOS_311)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGTGGGC
TTCTCTCAGTTCCCTTACTCACCTAAAATTAATCTGACACATTCCCATCG
CTAGAGGGTATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCC
CCCGATCGCCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGA
GCAAAAAGCGCGTACAGCCATGGTACGCACACATCACCATATCAACTGCT
CTCCGATTCCAAATACTGACTCCATCAGGCGCATGACCCCCTTCATAAAC
AGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATGA
ATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAGA
AAGAGGACAACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGAC
TCCCTATTCGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACAC
AGACGAGGAATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAGG
AAACCGACTACCTCATGGACCTAGTCGAAGAATACGACCTCCGCTGGGTC
GTAATCGCCGATCGCTACGACTATCAACCGCACCCCGTCGATGGCGACAG
CAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAGC
AGATGAAATCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCACTCGAG
CACCCACCCTCCGAGATGTCGGAAGCCGAATTTGAACTGCACGAAAAGAT
GCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCCC
TCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTC
GAAGAACTCAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAACG
TCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACAA
CCATGTACCAATCCAGCCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTC
CAAGCCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCGAAGGCGGT
GCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAG
CGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGCCGCCGCCC
CAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCG
AACAAAGAAGCGCAACAACAAGCCGTCCGGACCCTCACACCCGCCGAAGA
AGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGGCGTGCAAT
TCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGAACGTGCAG
ACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCT
TGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATT
CGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGT
GAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAA
GGAGGCGCTGGAGAAGGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGG
AGGATCAGCCACTTCCTGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGT
GCTGGGGATGCGGAGGGGCAGGAGAAGGGTGCGACAGATAAATCGGGAGA
GAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATA
AACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGG
CAAAGGAAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:512916..514827- >CAN33_4555-T1 ID=CAN33_4555-T1|Name=CAN33_4555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=8145bp|location=Sequence derived from alignment at NKJJ01000019.1:512916..514827- (Aspergillus niger FDAARGOS_311)
ATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGAT
GTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAA
GAGTACGAAGCGGCAAAGGAAGTAACCGACAAGAGCAAGAAACGCCGCTC
CATCCTGGGCCCGAAGGCGGTGCCGCTCCCAGCCCCGCCGGCGCAACCCC
GGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCCCA
ACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAGCC
GCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTCCG
GACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGACC
GACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCACA
CAGGCGAAATCGAACGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCGGA
ACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAAGG
ATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGAAG
GTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAGGA
GGAACGTGAGAAGAAGGCGAAGGAGGCGCTGGAGAAGGATAGCGCATGAC
CCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGC
AACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATG
GACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTCCGATAACGT
GCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAGCCCGCGTAC
CCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAGAACGACGAC
TGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGAAGAATACGA
CCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAACCGCACCCCG
TCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATAC
CGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGCCGCGAGCAT
GCTCGCACTCGAGCACCCACCCTCCGAGATGTCGGAAGCCGAATTTGAAC
TGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAA
GAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGA
AAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACGAGCAAGATT
TCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGC
GTCGGCAACACAACCATAGGGTATCACCCGTGAGCTCTATGCTCTGCTAG
GCGAACGAGCGCCCCCGATCGCCATCAACGAGAACCGATACAAGGGACGT
CCGAAATGGACGAGCAAAAAGCGCGTACAGCCATGATGGCCGCCGCCGAT
GTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCAGCCCCGACCTCATAA
GAAACAGAAGGTCGTCGAGAAGCGTCCAGATAAATCGGGAGAGAAGGCAG
AAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCT
GCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAA
GTAACCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCGAAGGCGGT
GCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAG
CGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGCCGCCGCCC
CAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCG
AACAAAGAAGCGCAACAACAAGCCGTCCGGACCCTCACACCCGCCGAAGA
AGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGGCGTGCAAT
TCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGAACGTGCAG
ACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCT
TGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATT
CGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGT
GAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAA
GGAGGCGCTGGAGAAGGATAGCGCATGACCCCCTTCATAAACAGCGCCCG
CTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCA
AGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGAC
AACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATT
CGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGG
AATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGAC
TACCTCATGGACCTAGTCGAAGAATACGACCTCCGCTGGGTCGTAATCGC
CGATCGCTACGACTATCAACCGCACCCCGTCGATGGCGACAGCAACAACG
CCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAA
TCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCACTCGAGCACCCACC
CTCCGAGATGTCGGAAGCCGAATTTGAACTGCACGAAAAGATGCTCAAAT
TCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTC
AACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACT
CAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAAC
TCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATAGGG
TATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCCCCGATCG
CCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAG
CGCGTACAGCCATGATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTG
CCCGCGGAGGGCCAGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAA
GCGTCCAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAG
AGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCAATGCT
AGTGATAAGAGTACGAAGCGGCAAAGGAAGTAACCGACAAGAGCAAGAAA
CGCCGCTCCATCCTGGGCCCGAAGGCGGTGCCGCTCCCAGCCCCGCCGGC
GCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGA
CACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCG
CGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAA
GCCGTCCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCA
CCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGA
AGCTCACACAGGCGAAATCGAACGTGCAGACGCAGAAACTCGCTGCTGCG
CTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGT
CTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGG
CGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCT
GCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTGGAGAAGGATAG
CGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCCG
CCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGCT
CCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTCC
GATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAGC
CCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAGA
ACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGAA
GAATACGACCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAACC
GCACCCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCAA
AGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGCC
GCGAGCATGCTCGCACTCGAGCACCCACCCTCCGAGATGTCGGAAGCCGA
ATTTGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGCT
CCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGTC
CGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACGA
GCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTCC
CTATCAGCGTCGGCAACACAACCATAGGGTATCACCCGTGAGCTCTATGC
TCTGCTAGGCGAACGAGCGCCCCCGATCGCCATCAACGAGAACCGATACA
AGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCCATGATGGCCG
CCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCAGCCCCGA
CCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGATAAATCGGGAGA
GAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATA
AACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGG
CAAAGGAAGTAACCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCG
AAGGCGGTGCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCC
CCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGC
CGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCG
CAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTCCGGACCCTCACACCC
GCCGAAGAAGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGG
CGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGA
ACGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCG
CTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCT
GATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGG
TGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAG
AAGGCGAAGGAGGCGCTGGAGAAGGATAGCGCATGACCCCCTTCATAAAC
AGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATGA
ATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAGA
AAGAGGACAACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGAC
TCCCTATTCGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACAC
AGACGAGGAATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAGG
AAACCGACTACCTCATGGACCTAGTCGAAGAATACGACCTCCGCTGGGTC
GTAATCGCCGATCGCTACGACTATCAACCGCACCCCGTCGATGGCGACAG
CAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAGC
AGATGAAATCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCACTCGAG
CACCCACCCTCCGAGATGTCGGAAGCCGAATTTGAACTGCACGAAAAGAT
GCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCCC
TCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTC
GAAGAACTCAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAACG
TCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACAA
CCATAGGGTATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCC
CCCGATCGCCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGA
GCAAAAAGCGCGTACAGCCATGATGGCCGCCGCCGATGTTCGCGACATGC
TGGATCTGCCCGCGGAGGGCCAGCCCCGACCTCATAAGAAACAGAAGGTC
GTCGAGAAGCGTCCAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGC
TGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGA
GCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAACCGACAAGA
GCAAGAAACGCCGCTCCATCCTGGGCCCGAAGGCGGTGCCGCTCCCAGCC
CCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGC
CGCGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAA
GGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGC
AACAACAAGCCGTCCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGC
GTGCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCG
CGCGCAGAAGCTCACACAGGCGAAATCGAACGTGCAGACGCAGAAACTCG
CTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACG
GAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCT
GCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTT
TGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTGGAG
AAGGATAGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTC
GTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCT
GGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCT
CAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAAC
ATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCA
TCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACC
TAGTCGAAGAATACGACCTCCGCTGGGTCGTAATCGCCGATCGCTACGAC
TATCAACCGCACCCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGT
CCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACT
TCATCGCCGCGAGCATGCTCGCACTCGAGCACCCACCCTCCGAGATGTCG
GAAGCCGAATTTGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCG
TGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCG
ACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACC
GCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCT
TGAAGTCCCTATCAGCGTCGGCAACACAACCATAGGGTATCACCCGTGAG
CTCTATGCTCTGCTAGGCGAACGAGCGCCCCCGATCGCCATCAACGAGAA
CCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACAGCCAT
GATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCC
AGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0045892 | negative regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262OLP |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR032563 |
| DBxref | InterPro:IPR008468 |
| DBxref | PFAM:PF16282 |
| DBxref | PFAM:PF05499 |
| Product | swr complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:512916..514827 - |
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