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CAN33_45565-T1, CAN33_45565-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45565-T1
Unique NameCAN33_45565-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2087541..2088837+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45565-T1 ID=CAN33_45565-T1|Name=CAN33_45565-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1297bp|location=Sequence derived from alignment at NKJJ01000022.1:2087541..2088837+ (Aspergillus niger FDAARGOS_311)
ATGGCGGAGTAAGTCTTCCTGGCCCTATCAGTCTCATCTAGGGGTCTGCA
TGCTAATGCTCGCTATAGGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCG
AGGCCTTGGTATGCACACCATGAAAATCTCCCCCCACCCGCCTTTTTCAC
GGCCGGCGACGATACTTACAGCGTGGCATATAGGTGGTGATGAAGATCAT
CAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCG
GTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCC
GTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACCC
GGCTGCTGCTGCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAGAT
GGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGT
ACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAAC
CAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCA
CGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCC
TGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAG
GAGTACGTTCATAATACTATTGCCCCGGAGGGATGATAGACGCATGCTAA
TTGGTTGTTTTTGGCAGGCTCCAAAAGTCCAACCTCAGGTACCAGGACAT
CCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCT
TCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCC
CCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCT
GGCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGA
AGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACC
AACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGAT
CACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTC
TCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTG
CCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGA
GCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGA
TGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2087541..2088837+

>CAN33_45565-T1 ID=CAN33_45565-T1|Name=CAN33_45565-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5160bp|location=Sequence derived from alignment at NKJJ01000022.1:2087541..2088837+ (Aspergillus niger FDAARGOS_311)
ATGGCGGAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGT
GGTGATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGA
CCGGTTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAAC
AGTTTCCCTTTCCCCGTCGTTGAGGCCAACGCCGCCTACGAGGCTGAGAT
GGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGT
ACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAAC
CAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCA
CGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCC
TGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAG
GAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCC
CGTTGAAATCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCC
AGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCG
TTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGA
CAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTC
TGCTTGACAGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTAC
TACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAA
CAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGC
TCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGC
CGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCA
GGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGG
GCAACCTGCTTCCGGGTGAGACGGCCAAATAGATGGCGGAGAAAGAAGTC
CCTCTCACGGCCGTCAAGGTCGAGGCCTTGGTGGTGATGAAGATCATCAA
GCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTA
TGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTC
GTTGAGGCCAACGCCGCCTACGAGGCTGAGATGGTCCGTATGATGCGCGA
GGTTAACGTTGACGCCAACAACGTTGGTTGGTACACTAGCGCCAACATGG
GCAACTTCATCAACATGAACGTGATCGAGAACCAGTTCTTTTACCAGAAG
GAGATGAACGAGCGCACGGTCGCTCTGGTGCACGACGTCAGCCGCAGCGC
ACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTCTCCTAAGTTCATGG
CGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGAGCTCCAAAAGTCCAAC
CTCAGGTACCAGGACATCCTGGTCGAGCTCCCCGTTGAAATCCACAACTC
TCACCTGATCACCTCCTTCATTCACCAGCTCCAGACTCCCACTCAGGCGA
CTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTAC
GCCAAGTCGTCCGTGCTGGCACCCAACTTCGACAACCTCTCCCTCAGCAT
CGACCCGTTCCTGGAGAAGAACTGCGACCTTCTGCTTGACAGCATCGAGG
TGCACCACACCGAGACCAACAACTTCCAGTACTACCAGCGGTCGCTCGCC
CGTGAGCAGGCCAAGATCACCGCGTGGCAGAACAAGCGCAAGACCGAGAA
CGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGC
AGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTC
AACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTC
TGCGACGACGGGTAAGATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTG
AGACGGCCAAATAGATGGCGGAGAAAGAAGTCCCTCTCACGGCCGTCAAG
GTCGAGGCCTTGGTGGTGATGAAGATCATCAAGCACGGCTCTCAGGCCTT
CCCGACGACTGCGACCGGTTCGATCGTCGGTATGGATGTCGACGGTACCC
TGGAGATCACCAACAGTTTCCCTTTCCCCGTCGTTGAGGCCAACGCCGCC
TACGAGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAA
CAACGTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGA
ACGTGATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACG
GTCGCTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCT
GCGCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACA
AGTTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATC
CTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTT
CATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCC
CGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTG
GCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAA
GAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCA
ACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATC
ACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCT
CAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGC
CCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAG
CAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGAT
GTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGATGG
CGGAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGTGGTG
ATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGG
TTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTT
TCCCTTTCCCCGTCGTTGAGGCCAACGCCGCCTACGAGGCTGAGATGGTC
CGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTGGTACAC
TAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGAACCAGT
TCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTGCACGAC
GTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTC
TCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCGAGGAGC
TCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGGTCGAGCTCCCCGTT
GAAATCCACAACTCTCACCTGATCACCTCCTTCATTCACCAGCTCCAGAC
TCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTCCCTGGCCGCGTTGG
AGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCACCCAACTTCGACAAC
CTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAACTGCGACCTTCTGCT
TGACAGCATCGAGGTGCACCACACCGAGACCAACAACTTCCAGTACTACC
AGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCGCGTGGCAGAACAAG
CGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCC
CGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCC
TGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGTACGCTCGCCAGGTC
GACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTTGCCGTCAAGGGCAA
CCTGCTTCCGGGTGAGACGGCCAAATAGATGGCGGAGAAAGAAGTCCCTC
TCACGGCCGTCAAGGTCGAGGCCTTGGTGGTGATGAAGATCATCAAGCAC
GGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTCGGTATGGA
TGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCCCGTCGTTG
AGGCCAACGCCGCCTACGAGGCTGAGATGGTCCGTATGATGCGCGAGGTT
AACGTTGACGCCAACAACGTTGGTTGGTACACTAGCGCCAACATGGGCAA
CTTCATCAACATGAACGTGATCGAGAACCAGTTCTTTTACCAGAAGGAGA
TGAACGAGCGCACGGTCGCTCTGGTGCACGACGTCAGCCGCAGCGCACAG
GGAAGCCTGAGCCTGCGCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGC
TTTCAAGGAGAACAAGTTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCA
GGTACCAGGACATCCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCAC
CTGATCACCTCCTTCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCC
CTCCGATCTCCCCCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCA
AGTCGTCCGTGCTGGCACCCAACTTCGACAACCTCTCCCTCAGCATCGAC
CCGTTCCTGGAGAAGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCA
CCACACCGAGACCAACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTG
AGCAGGCCAAGATCACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCC
AGCCGCGCGGCTCTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCG
GCTGTTCAAGCTGCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACA
GCCGCCAGGTTGAGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCG
ACGACGGGTAAGATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGAC
GGCCAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45565CAN33_45565Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45565-T1CAN33_45565-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45565-T1.exon1CAN33_45565-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45565-T1.exon2CAN33_45565-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45565-T1.exon3CAN33_45565-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45565-T1.exon4CAN33_45565-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_45565-T1.exon5CAN33_45565-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45565-T1.cdsCAN33_45565-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteMEROPS:MER0021886
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR027524
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
ProductJAB1/Mov34/MPN/PAD-1 ubiquitin protease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2087541..2088837 +
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