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CAN33_45635-T1, CAN33_45635-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45635-T1
Unique NameCAN33_45635-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2128919..2130052-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45635-T1 ID=CAN33_45635-T1|Name=CAN33_45635-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1134bp|location=Sequence derived from alignment at NKJJ01000022.1:2128919..2130052- (Aspergillus niger FDAARGOS_311)
ATGCCCGGAGTTCTCACCCAAACCCTCGCCGTCAGCGACGGGCCCCTCAC
CTCCGAAAACGCCGCCCTCCTACGCCCCTCCGACCCCAATCTCCCCCTCG
ACGAGCTCCGTGCCCGCTTCGACGCCGACGGCTACCTCTTCCTCAAACAA
GTCCTCCCCCGCGAAGACGTCCTTGAAGCCCGTCGTCAATACTTCTCCTA
CCTTGCCCCCACCGGCGTCCTCAAGACAGACAGCGACCCCGTCCACGGCA
TCTTCAACCCAGACAAAACCCCCGACGACTTCCCCGGCATTGGGGCTGGC
GCGGCTGCTGGTAACGGCCGGCCGGGCGGGGAGAGCGCCGCGGAGTTCGT
CGATCGCGCCATCGAGGCCCACTACAAGGACTGGTATGCCGAGAAGCTGG
TCCGGCATCCGGCGCTGTATGCCTTTATTGCCAAGTTCACTGGGTGGGGG
ACAATACGTTGACGTTTAAGCGGACGCTGCTGAGGAATAACATCCCCGAG
ACGAAGCCCATTGGGGTCCATTATGACCAAATTTTTATCAGACACGGGGA
GCCCACGGCTGTGACGGCTTGGGTGCCGATTGGGGATATCAAGTTGAGTG
GTGGAGGGTTGATTTACTTGGAGGATAGTATGTGGTTCTCTATATCTATA
ATATTGGAATGGGGTTGCTGACTAGTAGGACAGGTGATGTTGTGGGCCAG
AAGATTGAGAATGAGTTCACAGCCAAGGCCCTGGCAGCGGGCATGACGGA
GGAAGAGGCTAAATATGCCTTCAATTCGAATATGATGTCCACGGGCATGT
TGTCGGAGAATCCGGCCGAGTTTGCCAAGGAGAATGGCCGGCGTTGGTTG
GTTGCGGAATACGAGGCGGGGGATGTGGTGCTGCATAAGCCTCACATGGT
AAGCGGATAACCAGAGGTGTCTGGGATAGTGCTGACGAGATTTAGATTCA
CGCGTCGACGGTGAACAATGACCCGGATAGAGTGATTCGGTTGGCGACGG
ATCTGCGGTTTGCAGACTCATCCCGGCCGTATGATAAGGTGGGTTTAAAT
ACCTGAGGGCTTTCATGAATTGGATGGAGGCTGACCATGCTGCAGAGATG
GATGAACTTTTACCGATTTAATGACGGTGTTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2128919..2130052-

>CAN33_45635-T1 ID=CAN33_45635-T1|Name=CAN33_45635-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4380bp|location=Sequence derived from alignment at NKJJ01000022.1:2128919..2130052- (Aspergillus niger FDAARGOS_311)
AGATGGATGAACTTTTACCGATTTAATGACGGTGTTTAAATTCACGCGTC
GACGGTGAACAATGACCCGGATAGAGTGATTCGGTTGGCGACGGATCTGC
GGTTTGCAGACTCATCCCGGCCGTATGATAAGGTGATGTTGTGGGCCAGA
AGATTGAGAATGAGTTCACAGCCAAGGCCCTGGCAGCGGGCATGACGGAG
GAAGAGGCTAAATATGCCTTCAATTCGAATATGATGTCCACGGGCATGTT
GTCGGAGAATCCGGCCGAGTTTGCCAAGGAGAATGGCCGGCGTTGGTTGG
TTGCGGAATACGAGGCGGGGGATGTGGTGCTGCATAAGCCTCACATGACA
CGGGGAGCCCACGGCTGTGACGGCTTGGGTGCCGATTGGGGATATCAAGT
TGAGTGGTGGAGGGTTGATTTACTTGGAGGATAATGCCCGGAGTTCTCAC
CCAAACCCTCGCCGTCAGCGACGGGCCCCTCACCTCCGAAAACGCCGCCC
TCCTACGCCCCTCCGACCCCAATCTCCCCCTCGACGAGCTCCGTGCCCGC
TTCGACGCCGACGGCTACCTCTTCCTCAAACAAGTCCTCCCCCGCGAAGA
CGTCCTTGAAGCCCGTCGTCAATACTTCTCCTACCTTGCCCCCACCGGCG
TCCTCAAGACAGACAGCGACCCCGTCCACGGCATCTTCAACCCAGACAAA
ACCCCCGACGACTTCCCCGGCATTGGGGCTGGCGCGGCTGCTGGTAACGG
CCGGCCGGGCGGGGAGAGCGCCGCGGAGTTCGTCGATCGCGCCATCGAGG
CCCACTACAAGGACTGGTATGCCGAGAAGCTGGTCCGGCATCCGGCGCTG
TATGCCTTTATTGCCAAGTTCACTGGAGATGGATGAACTTTTACCGATTT
AATGACGGTGTTTAAATTCACGCGTCGACGGTGAACAATGACCCGGATAG
AGTGATTCGGTTGGCGACGGATCTGCGGTTTGCAGACTCATCCCGGCCGT
ATGATAAGGTGATGTTGTGGGCCAGAAGATTGAGAATGAGTTCACAGCCA
AGGCCCTGGCAGCGGGCATGACGGAGGAAGAGGCTAAATATGCCTTCAAT
TCGAATATGATGTCCACGGGCATGTTGTCGGAGAATCCGGCCGAGTTTGC
CAAGGAGAATGGCCGGCGTTGGTTGGTTGCGGAATACGAGGCGGGGGATG
TGGTGCTGCATAAGCCTCACATGACACGGGGAGCCCACGGCTGTGACGGC
TTGGGTGCCGATTGGGGATATCAAGTTGAGTGGTGGAGGGTTGATTTACT
TGGAGGATAATGCCCGGAGTTCTCACCCAAACCCTCGCCGTCAGCGACGG
GCCCCTCACCTCCGAAAACGCCGCCCTCCTACGCCCCTCCGACCCCAATC
TCCCCCTCGACGAGCTCCGTGCCCGCTTCGACGCCGACGGCTACCTCTTC
CTCAAACAAGTCCTCCCCCGCGAAGACGTCCTTGAAGCCCGTCGTCAATA
CTTCTCCTACCTTGCCCCCACCGGCGTCCTCAAGACAGACAGCGACCCCG
TCCACGGCATCTTCAACCCAGACAAAACCCCCGACGACTTCCCCGGCATT
GGGGCTGGCGCGGCTGCTGGTAACGGCCGGCCGGGCGGGGAGAGCGCCGC
GGAGTTCGTCGATCGCGCCATCGAGGCCCACTACAAGGACTGGTATGCCG
AGAAGCTGGTCCGGCATCCGGCGCTGTATGCCTTTATTGCCAAGTTCACT
GGAGATGGATGAACTTTTACCGATTTAATGACGGTGTTTAAATTCACGCG
TCGACGGTGAACAATGACCCGGATAGAGTGATTCGGTTGGCGACGGATCT
GCGGTTTGCAGACTCATCCCGGCCGTATGATAAGGTGATGTTGTGGGCCA
GAAGATTGAGAATGAGTTCACAGCCAAGGCCCTGGCAGCGGGCATGACGG
AGGAAGAGGCTAAATATGCCTTCAATTCGAATATGATGTCCACGGGCATG
TTGTCGGAGAATCCGGCCGAGTTTGCCAAGGAGAATGGCCGGCGTTGGTT
GGTTGCGGAATACGAGGCGGGGGATGTGGTGCTGCATAAGCCTCACATGA
CACGGGGAGCCCACGGCTGTGACGGCTTGGGTGCCGATTGGGGATATCAA
GTTGAGTGGTGGAGGGTTGATTTACTTGGAGGATAATGCCCGGAGTTCTC
ACCCAAACCCTCGCCGTCAGCGACGGGCCCCTCACCTCCGAAAACGCCGC
CCTCCTACGCCCCTCCGACCCCAATCTCCCCCTCGACGAGCTCCGTGCCC
GCTTCGACGCCGACGGCTACCTCTTCCTCAAACAAGTCCTCCCCCGCGAA
GACGTCCTTGAAGCCCGTCGTCAATACTTCTCCTACCTTGCCCCCACCGG
CGTCCTCAAGACAGACAGCGACCCCGTCCACGGCATCTTCAACCCAGACA
AAACCCCCGACGACTTCCCCGGCATTGGGGCTGGCGCGGCTGCTGGTAAC
GGCCGGCCGGGCGGGGAGAGCGCCGCGGAGTTCGTCGATCGCGCCATCGA
GGCCCACTACAAGGACTGGTATGCCGAGAAGCTGGTCCGGCATCCGGCGC
TGTATGCCTTTATTGCCAAGTTCACTGGAGATGGATGAACTTTTACCGAT
TTAATGACGGTGTTTAAATTCACGCGTCGACGGTGAACAATGACCCGGAT
AGAGTGATTCGGTTGGCGACGGATCTGCGGTTTGCAGACTCATCCCGGCC
GTATGATAAGGTGATGTTGTGGGCCAGAAGATTGAGAATGAGTTCACAGC
CAAGGCCCTGGCAGCGGGCATGACGGAGGAAGAGGCTAAATATGCCTTCA
ATTCGAATATGATGTCCACGGGCATGTTGTCGGAGAATCCGGCCGAGTTT
GCCAAGGAGAATGGCCGGCGTTGGTTGGTTGCGGAATACGAGGCGGGGGA
TGTGGTGCTGCATAAGCCTCACATGACACGGGGAGCCCACGGCTGTGACG
GCTTGGGTGCCGATTGGGGATATCAAGTTGAGTGGTGGAGGGTTGATTTA
CTTGGAGGATAATGCCCGGAGTTCTCACCCAAACCCTCGCCGTCAGCGAC
GGGCCCCTCACCTCCGAAAACGCCGCCCTCCTACGCCCCTCCGACCCCAA
TCTCCCCCTCGACGAGCTCCGTGCCCGCTTCGACGCCGACGGCTACCTCT
TCCTCAAACAAGTCCTCCCCCGCGAAGACGTCCTTGAAGCCCGTCGTCAA
TACTTCTCCTACCTTGCCCCCACCGGCGTCCTCAAGACAGACAGCGACCC
CGTCCACGGCATCTTCAACCCAGACAAAACCCCCGACGACTTCCCCGGCA
TTGGGGCTGGCGCGGCTGCTGGTAACGGCCGGCCGGGCGGGGAGAGCGCC
GCGGAGTTCGTCGATCGCGCCATCGAGGCCCACTACAAGGACTGGTATGC
CGAGAAGCTGGTCCGGCATCCGGCGCTGTATGCCTTTATTGCCAAGTTCA
CTGGAGATGGATGAACTTTTACCGATTTAATGACGGTGTTTAAATTCACG
CGTCGACGGTGAACAATGACCCGGATAGAGTGATTCGGTTGGCGACGGAT
CTGCGGTTTGCAGACTCATCCCGGCCGTATGATAAGGTGATGTTGTGGGC
CAGAAGATTGAGAATGAGTTCACAGCCAAGGCCCTGGCAGCGGGCATGAC
GGAGGAAGAGGCTAAATATGCCTTCAATTCGAATATGATGTCCACGGGCA
TGTTGTCGGAGAATCCGGCCGAGTTTGCCAAGGAGAATGGCCGGCGTTGG
TTGGTTGCGGAATACGAGGCGGGGGATGTGGTGCTGCATAAGCCTCACAT
GACACGGGGAGCCCACGGCTGTGACGGCTTGGGTGCCGATTGGGGATATC
AAGTTGAGTGGTGGAGGGTTGATTTACTTGGAGGATAATGCCCGGAGTTC
TCACCCAAACCCTCGCCGTCAGCGACGGGCCCCTCACCTCCGAAAACGCC
GCCCTCCTACGCCCCTCCGACCCCAATCTCCCCCTCGACGAGCTCCGTGC
CCGCTTCGACGCCGACGGCTACCTCTTCCTCAAACAAGTCCTCCCCCGCG
AAGACGTCCTTGAAGCCCGTCGTCAATACTTCTCCTACCTTGCCCCCACC
GGCGTCCTCAAGACAGACAGCGACCCCGTCCACGGCATCTTCAACCCAGA
CAAAACCCCCGACGACTTCCCCGGCATTGGGGCTGGCGCGGCTGCTGGTA
ACGGCCGGCCGGGCGGGGAGAGCGCCGCGGAGTTCGTCGATCGCGCCATC
GAGGCCCACTACAAGGACTGGTATGCCGAGAAGCTGGTCCGGCATCCGGC
GCTGTATGCCTTTATTGCCAAGTTCACTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45635CAN33_45635Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45635-T1CAN33_45635-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45635-T1.cdsCAN33_45635-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45635-T1.exon5CAN33_45635-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_45635-T1.exon4CAN33_45635-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_45635-T1.exon3CAN33_45635-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45635-T1.exon2CAN33_45635-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45635-T1.exon1CAN33_45635-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
ProductPhytanoyl-CoA dioxygenase (PhyH) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2128919..2130052 -
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